RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LIMD2Q9BT23 127 aa6.02□□□□□ -1.45
CLIP1-218ENST00000545889 IGIPA6NJ69 53 aa6.01□□□□□ -1.45
CLIP1-218ENST00000545889 PRYO14603 147 aa6.01□□□□□ -1.45
CLIP1-218ENST00000545889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-218ENST00000545889 PLA2G1BP04054 148 aaKnown RBP6.01□□□□□ -1.45
CLIP1-218ENST00000545889 LINC00315P59091 139 aa6.01□□□□□ -1.45
CLIP1-218ENST00000545889 A0A1B0GUV1 79 aa6□□□□□ -1.45
CLIP1-218ENST00000545889 NBEAL2Q6ZNJ1 2754 aa6□□□□□ -1.45
CLIP1-218ENST00000545889 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-218ENST00000545889 LINC01546A6NGU7 62 aa5.99□□□□□ -1.45
CLIP1-218ENST00000545889 CELSR1Q9NYQ6 3014 aa5.99□□□□□ -1.45
CLIP1-218ENST00000545889 Q9BRP9 147 aa5.99□□□□□ -1.45
CLIP1-218ENST00000545889 Q6ZRU5 148 aa5.98□□□□□ -1.45
CLIP1-218ENST00000545889 EIF4EBP3O60516 100 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-218ENST00000545889 PRLHP81277 87 aa5.98□□□□□ -1.45
CLIP1-218ENST00000545889 SMIM11BQ8TCY0 68 aa5.98□□□□□ -1.45
CLIP1-218ENST00000545889 SPACA4Q8TDM5 124 aa5.98□□□□□ -1.45
CLIP1-218ENST00000545889 FLG2Q5D862 2391 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-218ENST00000545889 IGHV6-1A0A0B4J1U7 121 aa5.98□□□□□ -1.45
CLIP1-218ENST00000545889 PSPHP1O15172 72 aa5.97□□□□□ -1.45
CLIP1-218ENST00000545889 CSMD1Q96PZ7 3565 aa5.97□□□□□ -1.45
CLIP1-218ENST00000545889 RTL8CO15255 209 aa5.97□□□□□ -1.45
CLIP1-218ENST00000545889 SMIM1B2RUZ4 78 aa5.97□□□□□ -1.45
CLIP1-218ENST00000545889 PRR4Q16378 134 aa5.96□□□□□ -1.45
CLIP1-218ENST00000545889 NBPF19A0A087WUL8 3843 aa5.96□□□□□ -1.46
CLIP1-218ENST00000545889 SVEP1Q4LDE5 3571 aa5.96□□□□□ -1.46
CLIP1-218ENST00000545889 K7EIL1 84 aa5.95□□□□□ -1.46
CLIP1-218ENST00000545889 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
CLIP1-218ENST00000545889 PRR3P79522 188 aaKnown RBP5.95□□□□□ -1.46
CLIP1-218ENST00000545889 COX8CQ7Z4L0 72 aa5.95□□□□□ -1.46
CLIP1-218ENST00000545889 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
CLIP1-218ENST00000545889 Q6ZRP5 223 aa5.95□□□□□ -1.46
CLIP1-218ENST00000545889 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
CLIP1-218ENST00000545889 A0A087WSZ3 146 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 FAM19A3Q7Z5A8 133 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 H3BNG1 76 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 Q6ZSN1 163 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 CSMD2Q7Z408 3487 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 A0A087WYN8 130 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 FAM218AQ96MZ4 157 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 AMELXQ99217 191 aa5.94□□□□□ -1.46
CLIP1-218ENST00000545889 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
CLIP1-218ENST00000545889 KIF25-AS1Q9Y6Z4 181 aa5.93□□□□□ -1.46
CLIP1-218ENST00000545889 OTOGQ6ZRI0 2925 aa5.93□□□□□ -1.46
CLIP1-218ENST00000545889 PDZD2O15018 2839 aa5.93□□□□□ -1.46
CLIP1-218ENST00000545889 NTM-AS1Q6ZSK4 140 aa5.93□□□□□ -1.46
CLIP1-218ENST00000545889 TYMSOSQ8TAI1 123 aa5.93□□□□□ -1.46
CLIP1-218ENST00000545889 FAM30AQ9NZY2 134 aa5.92□□□□□ -1.46
CLIP1-218ENST00000545889 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
CLIP1-218ENST00000545889 LINC00588Q9Y4M8 146 aa5.92□□□□□ -1.46
CLIP1-218ENST00000545889 NDUFC1O43677 76 aa5.92□□□□□ -1.46
CLIP1-218ENST00000545889 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
CLIP1-218ENST00000545889 RPL37AP61513 92 aaKnown RBP5.9□□□□□ -1.46
CLIP1-218ENST00000545889 C11orf72Q8NBR9 251 aa5.9□□□□□ -1.46
CLIP1-218ENST00000545889 H7BZZ5 65 aa5.9□□□□□ -1.47
CLIP1-218ENST00000545889 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.47
CLIP1-218ENST00000545889 KRTAP10-11P60412 298 aa5.9□□□□□ -1.47
CLIP1-218ENST00000545889 MOBPQ13875 183 aa5.9□□□□□ -1.47
CLIP1-218ENST00000545889 Q9UF83 564 aa5.9□□□□□ -1.47
CLIP1-218ENST00000545889 SPINK1P00995 79 aa5.89□□□□□ -1.47
CLIP1-218ENST00000545889 Q8NAQ8 132 aa5.89□□□□□ -1.47
CLIP1-218ENST00000545889 C19orf73Q9NVV2 129 aa5.89□□□□□ -1.47
CLIP1-218ENST00000545889 Q8N3U1 123 aa5.89□□□□□ -1.47
CLIP1-218ENST00000545889 FP248Q71RG6 208 aaPredicted RBP5.88□□□□□ -1.47
CLIP1-218ENST00000545889 LINC01547P58512 204 aaPredicted RBP5.87□□□□□ -1.47
CLIP1-218ENST00000545889 CD164Q04900 197 aa5.87□□□□□ -1.47
CLIP1-218ENST00000545889 LITAFQ99732 161 aa5.87□□□□□ -1.47
CLIP1-218ENST00000545889 LINC00167Q96N53 147 aa5.87□□□□□ -1.47
CLIP1-218ENST00000545889 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
CLIP1-218ENST00000545889 SMR3BP02814 79 aaPredicted RBP5.87□□□□□ -1.47
CLIP1-218ENST00000545889 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
CLIP1-218ENST00000545889 ZFHX3Q15911 3703 aa5.87□□□□□ -1.47
CLIP1-218ENST00000545889 C9orf129Q5T035 196 aaKnown RBP5.87□□□□□ -1.47
CLIP1-218ENST00000545889 TMEM254Q8TBM7 123 aa5.86□□□□□ -1.47
CLIP1-218ENST00000545889 Q8N814 137 aa5.86□□□□□ -1.47
CLIP1-218ENST00000545889 GIG44P09565 113 aaPredicted RBP5.86□□□□□ -1.47
CLIP1-218ENST00000545889 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
CLIP1-218ENST00000545889 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
CLIP1-218ENST00000545889 DEFB116Q30KQ4 102 aa5.86□□□□□ -1.47
CLIP1-218ENST00000545889 hDV103S1A0JD37 113 aa5.85□□□□□ -1.47
CLIP1-218ENST00000545889 CHTF8P0CG12 524 aa5.84□□□□□ -1.47
CLIP1-218ENST00000545889 A8MTW9 85 aa5.84□□□□□ -1.47
CLIP1-218ENST00000545889 TM2D3Q9BRN9 247 aa5.84□□□□□ -1.47
CLIP1-218ENST00000545889 STAB2Q8WWQ8 2551 aa5.84□□□□□ -1.48
CLIP1-218ENST00000545889 IGHV3OR16-9A0A0B4J2B5 98 aa5.84□□□□□ -1.48
CLIP1-218ENST00000545889 CSNK1G2-AS1Q8NCQ2 148 aa5.83□□□□□ -1.48
CLIP1-218ENST00000545889 LINC00575Q6W349 94 aa5.83□□□□□ -1.48
CLIP1-218ENST00000545889 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
CLIP1-218ENST00000545889 LINC01600Q96MT4 127 aa5.82□□□□□ -1.48
CLIP1-218ENST00000545889 DNAH10OSP0CZ25 163 aa5.82□□□□□ -1.48
CLIP1-218ENST00000545889 A6NED7 52 aa5.81□□□□□ -1.48
CLIP1-218ENST00000545889 ZNF575Q86XF7 245 aa5.81□□□□□ -1.48
CLIP1-218ENST00000545889 C6orf48Q9UBA6 75 aa5.81□□□□□ -1.48
CLIP1-218ENST00000545889 PCOTHQ58A44 107 aa5.81□□□□□ -1.48
CLIP1-218ENST00000545889 TENM1Q9UKZ4 2725 aa5.81□□□□□ -1.48
CLIP1-218ENST00000545889 KLKP1Q107X0 134 aa5.8□□□□□ -1.48
CLIP1-218ENST00000545889 EPM2AB3EWF7 344 aa5.79□□□□□ -1.48
CLIP1-218ENST00000545889 HCG22E2RYF7 251 aa5.79□□□□□ -1.48
CLIP1-218ENST00000545889 FAM229BQ4G0N7 80 aa5.79□□□□□ -1.48
CLIP1-218ENST00000545889 Q8NBF4 154 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms