RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 ETDCA0A1B0GVM5 59 aa8□□□□□ -1.13
CDCA3-210ENST00000545368 ZNF73O43830 326 aaPredicted RBP8□□□□□ -1.13
CDCA3-210ENST00000545368 IGLV7-43P04211 117 aa8□□□□□ -1.13
CDCA3-210ENST00000545368 CFC1BP0CG36 223 aa8□□□□□ -1.13
CDCA3-210ENST00000545368 CFC1P0CG37 223 aa8□□□□□ -1.13
CDCA3-210ENST00000545368 RPL13AP40429 203 aaKnown RBP8□□□□□ -1.13
CDCA3-210ENST00000545368 UBE2AP49459 152 aa8□□□□□ -1.13
CDCA3-210ENST00000545368 FAM19A1Q7Z5A9 133 aa8□□□□□ -1.13
CDCA3-210ENST00000545368 HSPG2P98160 4391 aa8□□□□□ -1.13
CDCA3-210ENST00000545368 SPRR1AP35321 89 aa7.99□□□□□ -1.13
CDCA3-210ENST00000545368 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
CDCA3-210ENST00000545368 DIRC1Q969H9 104 aa7.99□□□□□ -1.13
CDCA3-210ENST00000545368 NHP2Q9NX24 153 aaKnown RBP7.99□□□□□ -1.13
CDCA3-210ENST00000545368 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
CDCA3-210ENST00000545368 KRTAP10-4P60372 401 aaPredicted RBP7.98□□□□□ -1.13
CDCA3-210ENST00000545368 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
CDCA3-210ENST00000545368 GHRHP01286 108 aa7.97□□□□□ -1.13
CDCA3-210ENST00000545368 ZNF861PO60384 105 aa7.96□□□□□ -1.14
CDCA3-210ENST00000545368 PRLHP81277 87 aa7.96□□□□□ -1.14
CDCA3-210ENST00000545368 Q1RN00 199 aa7.96□□□□□ -1.14
CDCA3-210ENST00000545368 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
CDCA3-210ENST00000545368 KRTAP17-1Q9BYP8 105 aa7.96□□□□□ -1.14
CDCA3-210ENST00000545368 PRO1854Q9UHT4 67 aa7.96□□□□□ -1.14
CDCA3-210ENST00000545368 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
CDCA3-210ENST00000545368 H7C2G1 150 aa7.95□□□□□ -1.14
CDCA3-210ENST00000545368 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
CDCA3-210ENST00000545368 A0A1B0GWB2 263 aa7.94□□□□□ -1.14
CDCA3-210ENST00000545368 H0Y9J4 135 aa7.94□□□□□ -1.14
CDCA3-210ENST00000545368 K7ERJ3 54 aa7.94□□□□□ -1.14
CDCA3-210ENST00000545368 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
CDCA3-210ENST00000545368 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
CDCA3-210ENST00000545368 B5MCH6 92 aa7.93□□□□□ -1.14
CDCA3-210ENST00000545368 COX7BP24311 80 aa7.93□□□□□ -1.14
CDCA3-210ENST00000545368 VAMP3Q15836 100 aa7.93□□□□□ -1.14
CDCA3-210ENST00000545368 Q6ZRX8 168 aa7.93□□□□□ -1.14
CDCA3-210ENST00000545368 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
CDCA3-210ENST00000545368 HERC2O95714 4834 aa7.93□□□□□ -1.14
CDCA3-210ENST00000545368 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
CDCA3-210ENST00000545368 BATFQ16520 125 aa7.92□□□□□ -1.14
CDCA3-210ENST00000545368 HIGD2AQ9BW72 106 aa7.92□□□□□ -1.14
CDCA3-210ENST00000545368 VPS13BQ7Z7G8 4022 aa7.92□□□□□ -1.14
CDCA3-210ENST00000545368 ELOF1P60002 83 aaKnown RBP7.91□□□□□ -1.14
CDCA3-210ENST00000545368 INAFM2P0DMQ5 153 aa7.9□□□□□ -1.14
CDCA3-210ENST00000545368 FAT1Q14517 4588 aa7.9□□□□□ -1.15
CDCA3-210ENST00000545368 PCP4L1A6NKN8 68 aa7.89□□□□□ -1.15
CDCA3-210ENST00000545368 KRTAP4-5Q9BYR2 181 aa7.89□□□□□ -1.15
CDCA3-210ENST00000545368 DHRS4-AS1Q9P1J3 65 aa7.89□□□□□ -1.15
CDCA3-210ENST00000545368 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
CDCA3-210ENST00000545368 TSPAN13O95857 204 aa7.88□□□□□ -1.15
CDCA3-210ENST00000545368 PSMB2P49721 201 aa7.88□□□□□ -1.15
CDCA3-210ENST00000545368 SMCR5Q8TEV8 140 aa7.88□□□□□ -1.15
CDCA3-210ENST00000545368 SLC25A20O43772 301 aa7.87□□□□□ -1.15
CDCA3-210ENST00000545368 Q9BRP9 147 aa7.87□□□□□ -1.15
CDCA3-210ENST00000545368 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
CDCA3-210ENST00000545368 COX6CP09669 75 aa7.86□□□□□ -1.15
CDCA3-210ENST00000545368 H0YGX0 51 aa7.85□□□□□ -1.15
CDCA3-210ENST00000545368 TRIAP1O43715 76 aa7.85□□□□□ -1.15
CDCA3-210ENST00000545368 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
CDCA3-210ENST00000545368 SNCGO76070 127 aa7.83□□□□□ -1.16
CDCA3-210ENST00000545368 C21orf62-AS1Q17RA5 79 aa7.83□□□□□ -1.16
CDCA3-210ENST00000545368 LINC00575Q6W349 94 aa7.83□□□□□ -1.16
CDCA3-210ENST00000545368 SNHG12Q9BXW3 62 aa7.83□□□□□ -1.16
CDCA3-210ENST00000545368 hADV29S1A0JD25 119 aa7.82□□□□□ -1.16
CDCA3-210ENST00000545368 SCGB1C2P0DMR2 95 aa7.81□□□□□ -1.16
CDCA3-210ENST00000545368 SPRR4Q96PI1 79 aa7.81□□□□□ -1.16
CDCA3-210ENST00000545368 A0A1B0GX51 115 aa7.79□□□□□ -1.16
CDCA3-210ENST00000545368 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
CDCA3-210ENST00000545368 LYRM7Q5U5X0 104 aa7.79□□□□□ -1.16
CDCA3-210ENST00000545368 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
CDCA3-210ENST00000545368 ABCA13Q86UQ4 5058 aa7.78□□□□□ -1.16
CDCA3-210ENST00000545368 KRTAP1-4P0C5Y4 121 aa7.78□□□□□ -1.16
CDCA3-210ENST00000545368 ST20-AS1Q8NBB2 130 aa7.78□□□□□ -1.16
CDCA3-210ENST00000545368 CLEC2BQ92478 149 aa7.78□□□□□ -1.16
CDCA3-210ENST00000545368 NAA38Q9BRA0 125 aaKnown RBP7.78□□□□□ -1.16
CDCA3-210ENST00000545368 PKHD1L1Q86WI1 4243 aa7.78□□□□□ -1.16
CDCA3-210ENST00000545368 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
CDCA3-210ENST00000545368 TAX1BP3O14907 124 aa7.77□□□□□ -1.17
CDCA3-210ENST00000545368 OXTP01178 125 aa7.77□□□□□ -1.17
CDCA3-210ENST00000545368 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
CDCA3-210ENST00000545368 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.77□□□□□ -1.17
CDCA3-210ENST00000545368 Q6ZQY7 126 aa7.77□□□□□ -1.17
CDCA3-210ENST00000545368 FAM218AQ96MZ4 157 aa7.77□□□□□ -1.17
CDCA3-210ENST00000545368 C9orf118A6NHY6 69 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 H3BUT2 72 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 DNAL4O96015 105 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 CRYGAP11844 174 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 LINC00483Q53H64 154 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 DEFB105AQ8NG35 78 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 LINC01600Q96MT4 127 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
CDCA3-210ENST00000545368 TEX49A0A1B0GTD5 131 aa7.75□□□□□ -1.17
CDCA3-210ENST00000545368 IGLV5-48A0A075B6I7 105 aa7.74□□□□□ -1.17
CDCA3-210ENST00000545368 OCIAD2Q56VL3 154 aa7.74□□□□□ -1.17
CDCA3-210ENST00000545368 KRTAP29-1A8MX34 341 aaPredicted RBP7.73□□□□□ -1.17
CDCA3-210ENST00000545368 LST1O00453 97 aa7.73□□□□□ -1.17
CDCA3-210ENST00000545368 SPRR1BP22528 89 aa7.73□□□□□ -1.17
CDCA3-210ENST00000545368 A0A087X002 238 aa7.72□□□□□ -1.17
CDCA3-210ENST00000545368 A0A1W2PPM0 123 aa7.72□□□□□ -1.17
CDCA3-210ENST00000545368 TRACP01848 142 aa7.72□□□□□ -1.17
CDCA3-210ENST00000545368 FABP2P12104 132 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms