RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 C17orf112F2Z3M2 114 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 IGKV2D-40P01614 121 aaPredicted RBP1.68□□□□□ -2.14
SNHG1-222ENST00000545308 NDUFA6P56556 154 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 RAB4BP61018 213 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 C1orf137Q5JT78 98 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 TMEM14EPQ6UXP3 125 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 FP248Q71RG6 208 aaPredicted RBP1.68□□□□□ -2.14
SNHG1-222ENST00000545308 LINC00269Q8N2A0 174 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 Q9H521 79 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 LINC00846Q9NV44 126 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 HSPB11Q9Y547 144 aa1.68□□□□□ -2.14
SNHG1-222ENST00000545308 FSIP2Q5CZC0 6907 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 IGHV1-24A0A0C4DH33 117 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 TRBV6-5A0A0K0K1A5 114 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 M0R378 163 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 HIST1H2BKO60814 126 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 HIST1H2BJP06899 126 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 CXCL1P09341 107 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 LINC00694P0DN24 101 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 TPT1P13693 172 aaKnown RBP1.67□□□□□ -2.14
SNHG1-222ENST00000545308 UBE2D3P61077 147 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 UBE2D2P62837 147 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 Q1T7F1 81 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 NUP35Q8NFH5 326 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 SFT2D1Q8WV19 159 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 ZNF625Q96I27 306 aaPredicted RBP1.67□□□□□ -2.14
SNHG1-222ENST00000545308 OTORQ9NRC9 128 aa1.67□□□□□ -2.14
SNHG1-222ENST00000545308 IGHV1-58A0A0C4DH39 117 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 TRBV6-1A0A0K0K1D8 114 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 CCL25O15444 150 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 SSSCA1O60232 199 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 SFT2D2O95562 160 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 PYYP10082 97 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 FABP2P12104 132 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 RNASE3P12724 160 aaKnown RBP1.66□□□□□ -2.14
SNHG1-222ENST00000545308 FAM74A4Q5TZK3 123 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 MIC13Q5XKP0 118 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 KRTAP26-1Q6PEX3 210 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 IZUMO2Q6UXV1 221 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 HYLS1Q96M11 299 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 AQP10Q96PS8 301 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 MGST2Q99735 147 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 BATF3Q9NR55 127 aa1.66□□□□□ -2.14
SNHG1-222ENST00000545308 A0A096LNI7 61 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 FGF7P21781 194 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 RPL35P42766 123 aaKnown RBP1.65□□□□□ -2.15
SNHG1-222ENST00000545308 RAB5CP51148 216 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 IQCJQ1A5X6 159 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 ASB16-AS1Q495Z4 193 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 SPAG11AQ6PDA7 123 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 C2orf82Q6UX34 121 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 SMIM4Q8WVI0 70 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 CARD19Q96LW7 228 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 NAA38Q9BRA0 125 aaKnown RBP1.65□□□□□ -2.15
SNHG1-222ENST00000545308 TMEM126AQ9H061 195 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 GSKIPQ9P0R6 139 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 SNURFQ9Y675 71 aa1.65□□□□□ -2.15
SNHG1-222ENST00000545308 GVQW2A0A096LPI5 108 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-222ENST00000545308 A0A1W2PRE2 83 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 F6UZH7 168 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 K7ERJ3 54 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 LYRM1O43325 122 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 NUPR1O60356 82 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 BCL2P10415 239 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 UBE2L3P68036 154 aaKnown RBP1.64□□□□□ -2.15
SNHG1-222ENST00000545308 HBBP68871 147 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 ZNF56Q15929 161 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 C9orf116Q5BN46 136 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-222ENST00000545308 CLPSL2Q6UWE3 100 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 TOMM5Q8N4H5 51 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 CHCHD1Q96BP2 118 aaKnown RBP1.64□□□□□ -2.15
SNHG1-222ENST00000545308 LINC00526Q96FQ7 95 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 RETNLBQ9BQ08 111 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 SPANXA1Q9NS26 97 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 NDUFA12Q9UI09 145 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 ZFP30Q9Y2G7 519 aa1.64□□□□□ -2.15
SNHG1-222ENST00000545308 A0A087WXM4 84 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 IGKV2D-26A0A0A0MRZ7 120 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 IGKV2-29A2NJV5 120 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-222ENST00000545308 C9orf170A2RU37 121 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 NAP1L6A6NFF2 107 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 CCDC160A6NGH7 325 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 M0R2T5 61 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 ZNF25P17030 456 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-222ENST00000545308 LSM3P62310 102 aaKnown RBP1.63□□□□□ -2.15
SNHG1-222ENST00000545308 NEDD8Q15843 81 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 SPANXN1Q5VSR9 72 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 C5orf17Q8NAS9 161 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 FAM167A-AS1Q96KT0 104 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 NAT8BQ9UHF3 227 aa1.63□□□□□ -2.15
SNHG1-222ENST00000545308 UBE2L5PA0A1B0GUS4 154 aa1.62□□□□□ -2.15
SNHG1-222ENST00000545308 FAM24AA6NFZ4 105 aa1.62□□□□□ -2.15
SNHG1-222ENST00000545308 H3BVH4 76 aa1.62□□□□□ -2.15
SNHG1-222ENST00000545308 NCR2O95944 276 aa1.62□□□□□ -2.15
SNHG1-222ENST00000545308 TCRAP04437 139 aa1.62□□□□□ -2.15
SNHG1-222ENST00000545308 TEX261Q6UWH6 196 aa1.62□□□□□ -2.15
SNHG1-222ENST00000545308 PHF5AQ7RTV0 110 aaKnown RBP1.62□□□□□ -2.15
SNHG1-222ENST00000545308 NIT2Q9NQR4 276 aa1.62□□□□□ -2.15
SNHG1-222ENST00000545308 TMEM167BQ9NRX6 74 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 273.5 ms