RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 J3QQQ9 107 aa12.36□□□□□ -0.43
CDKN3-207ENST00000543789 ZNF73O43830 326 aaPredicted RBP12.36□□□□□ -0.43
CDKN3-207ENST00000543789 C5orf52A6NGY3 159 aa12.35□□□□□ -0.43
CDKN3-207ENST00000543789 MT1HP80294 61 aa12.35□□□□□ -0.43
CDKN3-207ENST00000543789 PCOTHQ58A44 107 aa12.35□□□□□ -0.43
CDKN3-207ENST00000543789 NMUP48645 174 aa12.34□□□□□ -0.43
CDKN3-207ENST00000543789 IGLV8-61A0A075B6I0 122 aa12.33□□□□□ -0.44
CDKN3-207ENST00000543789 PLNP26678 52 aa12.33□□□□□ -0.44
CDKN3-207ENST00000543789 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
CDKN3-207ENST00000543789 HINT1P49773 126 aaPredicted RBP12.32□□□□□ -0.44
CDKN3-207ENST00000543789 HERVK_113P61574 105 aa12.32□□□□□ -0.44
CDKN3-207ENST00000543789 LIMD2Q9BT23 127 aa12.32□□□□□ -0.44
CDKN3-207ENST00000543789 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
CDKN3-207ENST00000543789 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
CDKN3-207ENST00000543789 SERF1AO75920 110 aa12.3□□□□□ -0.44
CDKN3-207ENST00000543789 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
CDKN3-207ENST00000543789 C9orf92A6NGG3 77 aa12.29□□□□□ -0.44
CDKN3-207ENST00000543789 SOSTDC1Q6X4U4 206 aa12.29□□□□□ -0.44
CDKN3-207ENST00000543789 EIF4EBP3O60516 100 aaPredicted RBP12.28□□□□□ -0.44
CDKN3-207ENST00000543789 DPM2O94777 84 aa12.28□□□□□ -0.44
CDKN3-207ENST00000543789 NPC2P61916 151 aa12.28□□□□□ -0.44
CDKN3-207ENST00000543789 SLC25A34Q6PIV7 304 aa12.28□□□□□ -0.44
CDKN3-207ENST00000543789 CBY1Q9Y3M2 126 aa12.28□□□□□ -0.44
CDKN3-207ENST00000543789 SPRR1BP22528 89 aa12.27□□□□□ -0.45
CDKN3-207ENST00000543789 ADAMTSL4-AS1Q5T5F5 129 aa12.26□□□□□ -0.45
CDKN3-207ENST00000543789 LINC00310P59036 64 aa12.25□□□□□ -0.45
CDKN3-207ENST00000543789 PMCHL2Q9BQD1 86 aa12.25□□□□□ -0.45
CDKN3-207ENST00000543789 A0A0J9YXY3 114 aa12.24□□□□□ -0.45
CDKN3-207ENST00000543789 IGKCP01834 107 aa12.24□□□□□ -0.45
CDKN3-207ENST00000543789 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
CDKN3-207ENST00000543789 HSPB8Q9UJY1 196 aa12.24□□□□□ -0.45
CDKN3-207ENST00000543789 FABP4P15090 132 aa12.22□□□□□ -0.45
CDKN3-207ENST00000543789 DHRS4-AS1Q9P1J3 65 aa12.22□□□□□ -0.45
CDKN3-207ENST00000543789 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
CDKN3-207ENST00000543789 LORP23490 312 aaPredicted RBP12.19□□□□□ -0.46
CDKN3-207ENST00000543789 KRTAP10-6P60371 365 aaPredicted RBP12.18□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BKO60814 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BJP06899 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BOP23527 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BBP33778 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BDP58876 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BCP62807 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 CD164Q04900 197 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST2H2BEQ16778 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BHQ93079 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BNQ99877 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 HIST1H2BMQ99879 126 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 SPANXCQ9NY87 97 aa12.17□□□□□ -0.46
CDKN3-207ENST00000543789 E9PLD3 99 aa12.16□□□□□ -0.46
CDKN3-207ENST00000543789 TAL2Q16559 108 aa12.14□□□□□ -0.47
CDKN3-207ENST00000543789 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
CDKN3-207ENST00000543789 PRO1933Q9H354 126 aa12.14□□□□□ -0.47
CDKN3-207ENST00000543789 DEFB105AQ8NG35 78 aa12.13□□□□□ -0.47
CDKN3-207ENST00000543789 M0R2T5 61 aa12.12□□□□□ -0.47
CDKN3-207ENST00000543789 Q1RN00 199 aa12.12□□□□□ -0.47
CDKN3-207ENST00000543789 LITAFQ99732 161 aa12.12□□□□□ -0.47
CDKN3-207ENST00000543789 SPANXDQ9BXN6 97 aa12.12□□□□□ -0.47
CDKN3-207ENST00000543789 H7C2G1 150 aa12.11□□□□□ -0.47
CDKN3-207ENST00000543789 COX7BP24311 80 aa12.11□□□□□ -0.47
CDKN3-207ENST00000543789 ELOF1P60002 83 aaKnown RBP12.11□□□□□ -0.47
CDKN3-207ENST00000543789 Q5XG85 94 aa12.1□□□□□ -0.47
CDKN3-207ENST00000543789 TEX49A0A1B0GTD5 131 aa12.09□□□□□ -0.47
CDKN3-207ENST00000543789 TIMM17BO60830 172 aa12.08□□□□□ -0.48
CDKN3-207ENST00000543789 C6orf99Q4VX62 202 aa12.08□□□□□ -0.48
CDKN3-207ENST00000543789 C1orf195Q5TG92 126 aa12.08□□□□□ -0.48
CDKN3-207ENST00000543789 AKR1D1P51857 326 aa12.07□□□□□ -0.48
CDKN3-207ENST00000543789 RPL37P61927 97 aaKnown RBP12.06□□□□□ -0.48
CDKN3-207ENST00000543789 COX6B2Q6YFQ2 88 aa12.06□□□□□ -0.48
CDKN3-207ENST00000543789 LINC00518Q8N0U6 118 aa12.06□□□□□ -0.48
CDKN3-207ENST00000543789 SYS1-DBNDD2H3BUS1 97 aa12.04□□□□□ -0.48
CDKN3-207ENST00000543789 S100A1P23297 94 aa12.03□□□□□ -0.48
CDKN3-207ENST00000543789 SMIM29Q86T20 159 aa12.03□□□□□ -0.48
CDKN3-207ENST00000543789 COA6Q5JTJ3 125 aaKnown RBP12.01□□□□□ -0.49
CDKN3-207ENST00000543789 TRBV7-6A0A0J9YX20 115 aa12□□□□□ -0.49
CDKN3-207ENST00000543789 PET117Q6UWS5 81 aa12□□□□□ -0.49
CDKN3-207ENST00000543789 A0A0G2JQZ4 141 aa11.99□□□□□ -0.49
CDKN3-207ENST00000543789 ZNF815PA8K554 130 aa11.99□□□□□ -0.49
CDKN3-207ENST00000543789 LINC01545Q5VT33 79 aa11.97□□□□□ -0.49
CDKN3-207ENST00000543789 IGLV5-48A0A075B6I7 105 aa11.96□□□□□ -0.49
CDKN3-207ENST00000543789 A0A1B0GWB2 263 aa11.96□□□□□ -0.49
CDKN3-207ENST00000543789 KRTDAPP60985 99 aa11.96□□□□□ -0.49
CDKN3-207ENST00000543789 C3orf79P0CE67 100 aa11.95□□□□□ -0.5
CDKN3-207ENST00000543789 FLGP20930 4061 aaPredicted RBP11.95□□□□□ -0.5
CDKN3-207ENST00000543789 TTTY13Q9BZ97 58 aa11.94□□□□□ -0.5
CDKN3-207ENST00000543789 TCL1BO95988 128 aa11.93□□□□□ -0.5
CDKN3-207ENST00000543789 C20orf202A1L168 122 aa11.91□□□□□ -0.5
CDKN3-207ENST00000543789 A6NDN8 102 aa11.89□□□□□ -0.51
CDKN3-207ENST00000543789 A4D1N5 150 aa11.88□□□□□ -0.51
CDKN3-207ENST00000543789 COPS9Q8WXC6 57 aa11.88□□□□□ -0.51
CDKN3-207ENST00000543789 SCGB1D4Q6XE38 83 aa11.87□□□□□ -0.51
CDKN3-207ENST00000543789 NHP2Q9NX24 153 aaKnown RBP11.85□□□□□ -0.51
CDKN3-207ENST00000543789 IFITM1P13164 125 aa11.84□□□□□ -0.51
CDKN3-207ENST00000543789 S100A2P29034 98 aa11.84□□□□□ -0.51
CDKN3-207ENST00000543789 S100A6P06703 90 aa11.82□□□□□ -0.52
CDKN3-207ENST00000543789 Q6Q795 121 aa11.81□□□□□ -0.52
CDKN3-207ENST00000543789 F8WEM9 126 aa11.8□□□□□ -0.52
CDKN3-207ENST00000543789 Q6ZVH6 145 aa11.8□□□□□ -0.52
CDKN3-207ENST00000543789 ATOH7Q8N100 152 aa11.8□□□□□ -0.52
CDKN3-207ENST00000543789 HIST3H2BBQ8N257 126 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms