RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MOBPQ13875 183 aa4.68□□□□□ -1.66
SRGAP1-206ENST00000543397 PHF5AQ7RTV0 110 aaKnown RBP4.68□□□□□ -1.66
SRGAP1-206ENST00000543397 PCNTO95613 3336 aa4.68□□□□□ -1.66
SRGAP1-206ENST00000543397 A0A1B0GW54 56 aa4.68□□□□□ -1.66
SRGAP1-206ENST00000543397 CSNK1G2-AS1Q8NCQ2 148 aa4.68□□□□□ -1.66
SRGAP1-206ENST00000543397 IGLV8-61A0A075B6I0 122 aa4.67□□□□□ -1.66
SRGAP1-206ENST00000543397 LINC01547P58512 204 aaPredicted RBP4.67□□□□□ -1.66
SRGAP1-206ENST00000543397 GVQW2A0A096LPI5 108 aaPredicted RBP4.67□□□□□ -1.66
SRGAP1-206ENST00000543397 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
SRGAP1-206ENST00000543397 LINC00208Q96KT6 92 aa4.66□□□□□ -1.66
SRGAP1-206ENST00000543397 FAM218AQ96MZ4 157 aa4.66□□□□□ -1.66
SRGAP1-206ENST00000543397 C5orf42Q9H799 3197 aa4.65□□□□□ -1.66
SRGAP1-206ENST00000543397 CHD9Q3L8U1 2897 aa4.65□□□□□ -1.66
SRGAP1-206ENST00000543397 TYMSOSQ8TAI1 123 aa4.65□□□□□ -1.66
SRGAP1-206ENST00000543397 LINC01546A6NGU7 62 aa4.65□□□□□ -1.66
SRGAP1-206ENST00000543397 BAHCC1Q9P281 2608 aa4.65□□□□□ -1.67
SRGAP1-206ENST00000543397 COL6A5A8TX70 2615 aa4.64□□□□□ -1.67
SRGAP1-206ENST00000543397 RPL37AP61513 92 aaKnown RBP4.64□□□□□ -1.67
SRGAP1-206ENST00000543397 Q8NBF4 154 aa4.64□□□□□ -1.67
SRGAP1-206ENST00000543397 HTTP42858 3142 aa4.63□□□□□ -1.67
SRGAP1-206ENST00000543397 EPM2AB3EWF7 344 aa4.63□□□□□ -1.67
SRGAP1-206ENST00000543397 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
SRGAP1-206ENST00000543397 TEX15Q9BXT5 2789 aa4.63□□□□□ -1.67
SRGAP1-206ENST00000543397 Q6ZRX8 168 aa4.63□□□□□ -1.67
SRGAP1-206ENST00000543397 LAMA3Q16787 3333 aa4.63□□□□□ -1.67
SRGAP1-206ENST00000543397 BCE1O60756 84 aa4.62□□□□□ -1.67
SRGAP1-206ENST00000543397 A0A0C4DFX4 3053 aa4.62□□□□□ -1.67
SRGAP1-206ENST00000543397 GIG44P09565 113 aaPredicted RBP4.62□□□□□ -1.67
SRGAP1-206ENST00000543397 A0A087WVE0 104 aa4.61□□□□□ -1.67
SRGAP1-206ENST00000543397 WDFY3Q8IZQ1 3526 aa4.61□□□□□ -1.67
SRGAP1-206ENST00000543397 ELOF1P60002 83 aaKnown RBP4.61□□□□□ -1.67
SRGAP1-206ENST00000543397 H3BPC8 53 aa4.61□□□□□ -1.67
SRGAP1-206ENST00000543397 AKAP13Q12802 2813 aa4.6□□□□□ -1.67
SRGAP1-206ENST00000543397 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
SRGAP1-206ENST00000543397 A0A087WTM6 91 aa4.6□□□□□ -1.67
SRGAP1-206ENST00000543397 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
SRGAP1-206ENST00000543397 PCOTHQ58A44 107 aa4.6□□□□□ -1.67
SRGAP1-206ENST00000543397 UNC79Q9P2D8 2635 aa4.6□□□□□ -1.67
SRGAP1-206ENST00000543397 MGAQ8IWI9 3026 aa4.59□□□□□ -1.67
SRGAP1-206ENST00000543397 SPINK1P00995 79 aa4.59□□□□□ -1.67
SRGAP1-206ENST00000543397 C8orf17Q9NRJ1 99 aa4.59□□□□□ -1.67
SRGAP1-206ENST00000543397 LINC00612Q8N6U2 182 aa4.59□□□□□ -1.68
SRGAP1-206ENST00000543397 H0Y9P7 68 aa4.59□□□□□ -1.68
SRGAP1-206ENST00000543397 PRR34Q9NV39 138 aa4.59□□□□□ -1.68
SRGAP1-206ENST00000543397 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
SRGAP1-206ENST00000543397 LINC00476Q8WZB0 136 aa4.58□□□□□ -1.68
SRGAP1-206ENST00000543397 LINC00846Q9NV44 126 aa4.58□□□□□ -1.68
SRGAP1-206ENST00000543397 FAM168BA1KXE4 195 aa4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 MKI67P46013 3256 aaKnown RBP4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 IGLV7-43P04211 117 aa4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 ST20-AS1Q8NBB2 130 aa4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 SMR3BP02814 79 aaPredicted RBP4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 TRANK1O15050 2925 aa4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 C9orf163Q8N9P6 203 aa4.57□□□□□ -1.68
SRGAP1-206ENST00000543397 DSPP15924 2871 aaKnown RBP4.56□□□□□ -1.68
SRGAP1-206ENST00000543397 A8MWP4 228 aa4.55□□□□□ -1.68
SRGAP1-206ENST00000543397 C15orf56Q8N910 161 aa4.55□□□□□ -1.68
SRGAP1-206ENST00000543397 NOTCH1P46531 2555 aa4.55□□□□□ -1.68
SRGAP1-206ENST00000543397 IGSF10Q6WRI0 2623 aa4.54□□□□□ -1.68
SRGAP1-206ENST00000543397 CHD6Q8TD26 2715 aa4.54□□□□□ -1.68
SRGAP1-206ENST00000543397 IGLV1-50A0A075B6I6 118 aa4.54□□□□□ -1.68
SRGAP1-206ENST00000543397 TP53AIP1Q9HCN2 124 aa4.54□□□□□ -1.68
SRGAP1-206ENST00000543397 ZNF861PO60384 105 aa4.53□□□□□ -1.68
SRGAP1-206ENST00000543397 IGLV6-57P01721 117 aa4.53□□□□□ -1.68
SRGAP1-206ENST00000543397 C1orf64Q8NEQ6 169 aa4.53□□□□□ -1.68
SRGAP1-206ENST00000543397 TRAV22A0A0B4J277 110 aa4.53□□□□□ -1.68
SRGAP1-206ENST00000543397 WDFY4Q6ZS81 3184 aa4.53□□□□□ -1.68
SRGAP1-206ENST00000543397 FAM229BQ4G0N7 80 aa4.53□□□□□ -1.68
SRGAP1-206ENST00000543397 KCNQ1DNQ9H478 68 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 LINC00304Q8N9R0 145 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 BRCA2P51587 3418 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 PRUNE2Q8WUY3 3088 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 ZNF575Q86XF7 245 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 Q96NJ1 140 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 NBEAL1Q6ZS30 2694 aa4.52□□□□□ -1.69
SRGAP1-206ENST00000543397 Q6ZQT0 140 aa4.51□□□□□ -1.69
SRGAP1-206ENST00000543397 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
SRGAP1-206ENST00000543397 GCN1Q92616 2671 aaKnown RBP4.51□□□□□ -1.69
SRGAP1-206ENST00000543397 SPTBN5Q9NRC6 3674 aaKnown RBP4.51□□□□□ -1.69
SRGAP1-206ENST00000543397 SSBP3-AS1Q7Z2R9 100 aa4.51□□□□□ -1.69
SRGAP1-206ENST00000543397 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
SRGAP1-206ENST00000543397 CASC10Q5T4H9 136 aa4.5□□□□□ -1.69
SRGAP1-206ENST00000543397 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
SRGAP1-206ENST00000543397 TLX1NBP0CAT3 122 aa4.5□□□□□ -1.69
SRGAP1-206ENST00000543397 TRBV7-4A0A0J9YYF1 115 aa4.5□□□□□ -1.69
SRGAP1-206ENST00000543397 LITAFQ99732 161 aa4.5□□□□□ -1.69
SRGAP1-206ENST00000543397 CNBPP62633 177 aaKnown RBP4.49□□□□□ -1.69
SRGAP1-206ENST00000543397 LOC110117498A0A087WWA1 95 aa4.49□□□□□ -1.69
SRGAP1-206ENST00000543397 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
SRGAP1-206ENST00000543397 CR1P17927 2039 aa4.49□□□□□ -1.69
SRGAP1-206ENST00000543397 ACYP2P14621 99 aa4.48□□□□□ -1.69
SRGAP1-206ENST00000543397 MAP1AP78559 2803 aaPredicted RBP4.48□□□□□ -1.69
SRGAP1-206ENST00000543397 PSORS1C2Q9UIG4 136 aa4.48□□□□□ -1.69
SRGAP1-206ENST00000543397 FP248Q71RG6 208 aaPredicted RBP4.48□□□□□ -1.69
SRGAP1-206ENST00000543397 TRIOO75962 3097 aa4.48□□□□□ -1.69
SRGAP1-206ENST00000543397 UNC80Q8N2C7 3258 aa4.47□□□□□ -1.69
SRGAP1-206ENST00000543397 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
SRGAP1-206ENST00000543397 UBR5O95071 2799 aaPredicted RBP4.47□□□□□ -1.69
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