RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 UBE2BP63146 152 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 UBE2V1Q13404 147 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 VAMP3Q15836 100 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 CBY1Q9Y3M2 126 aa3.6□□□□□ -1.83
ABCF1-207ENST00000542772 TMEM238LA0A1B0GVL6 79 aa3.59□□□□□ -1.83
ABCF1-207ENST00000542772 A6NJY4 79 aa3.59□□□□□ -1.83
ABCF1-207ENST00000542772 PRYO14603 147 aa3.59□□□□□ -1.83
ABCF1-207ENST00000542772 BCE1O60756 84 aa3.59□□□□□ -1.83
ABCF1-207ENST00000542772 IGLV7-43P04211 117 aa3.59□□□□□ -1.83
ABCF1-207ENST00000542772 RPL37AP61513 92 aaKnown RBP3.59□□□□□ -1.83
ABCF1-207ENST00000542772 S100A7L2Q5SY68 101 aa3.59□□□□□ -1.83
ABCF1-207ENST00000542772 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
ABCF1-207ENST00000542772 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
ABCF1-207ENST00000542772 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 TRBV7-6A0A0J9YX20 115 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 B5MCH6 92 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 TAX1BP3O14907 124 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 ZNF861PO60384 105 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
ABCF1-207ENST00000542772 C1orf137Q5JT78 98 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 Q5VSD8 79 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 GTF2H5Q6ZYL4 71 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 OR13C6PQ8NH95 151 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 KRTAP4-5Q9BYR2 181 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 PRO1854Q9UHT4 67 aa3.58□□□□□ -1.84
ABCF1-207ENST00000542772 C9orf118A6NHY6 69 aa3.57□□□□□ -1.84
ABCF1-207ENST00000542772 ZNF73O43830 326 aaPredicted RBP3.57□□□□□ -1.84
ABCF1-207ENST00000542772 INAFM2P0DMQ5 153 aa3.57□□□□□ -1.84
ABCF1-207ENST00000542772 SPINK6Q6UWN8 80 aa3.57□□□□□ -1.84
ABCF1-207ENST00000542772 SMIM11BQ8TCY0 68 aa3.57□□□□□ -1.84
ABCF1-207ENST00000542772 ELOF1P60002 83 aaKnown RBP3.56□□□□□ -1.84
ABCF1-207ENST00000542772 C6orf99Q4VX62 202 aa3.56□□□□□ -1.84
ABCF1-207ENST00000542772 RAB37Q96AX2 223 aa3.56□□□□□ -1.84
ABCF1-207ENST00000542772 NHP2Q9NX24 153 aaKnown RBP3.56□□□□□ -1.84
ABCF1-207ENST00000542772 ETDCA0A1B0GVM5 59 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 K7EP34 96 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 FABP2P12104 132 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
ABCF1-207ENST00000542772 Q6ZRX8 168 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 FAM19A1Q7Z5A9 133 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 DIRC1Q969H9 104 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 Q9BRP9 147 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
ABCF1-207ENST00000542772 A0A1W2PPM0 123 aa3.54□□□□□ -1.84
ABCF1-207ENST00000542772 H0YGX0 51 aa3.54□□□□□ -1.84
ABCF1-207ENST00000542772 H3BUT2 72 aa3.54□□□□□ -1.84
ABCF1-207ENST00000542772 COX7BP24311 80 aa3.54□□□□□ -1.84
ABCF1-207ENST00000542772 LYRM7Q5U5X0 104 aa3.54□□□□□ -1.84
ABCF1-207ENST00000542772 SMCR5Q8TEV8 140 aa3.54□□□□□ -1.84
ABCF1-207ENST00000542772 K7ERU9 68 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 ERC2-IT1O76042 136 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 TSPAN13O95857 204 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 UBE2AP49459 152 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 PRLHP81277 87 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 LINC00575Q6W349 94 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 DHRS4-AS1Q9P1J3 65 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 SPCS1Q9Y6A9 102 aa3.53□□□□□ -1.84
ABCF1-207ENST00000542772 A0A1B0GX51 115 aa3.52□□□□□ -1.85
ABCF1-207ENST00000542772 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
ABCF1-207ENST00000542772 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 LRP1Q07954 4544 aaKnown RBP3.51□□□□□ -1.85
ABCF1-207ENST00000542772 hADV29S1A0JD25 119 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 H7C2G1 150 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 K7ERJ3 54 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 TRIAP1O43715 76 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 SPRR1BP22528 89 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 LINC01600Q96MT4 127 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 HIGD2AQ9BW72 106 aa3.51□□□□□ -1.85
ABCF1-207ENST00000542772 IGLV5-48A0A075B6I7 105 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 KRTAP29-1A8MX34 341 aaPredicted RBP3.5□□□□□ -1.85
ABCF1-207ENST00000542772 J3QR89 54 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 OXTP01178 125 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 COX6CP09669 75 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 LINC01547P58512 204 aaPredicted RBP3.5□□□□□ -1.85
ABCF1-207ENST00000542772 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 LINC00483Q53H64 154 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 OCIAD2Q56VL3 154 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 SPRR4Q96PI1 79 aa3.5□□□□□ -1.85
ABCF1-207ENST00000542772 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 F8W1H4 67 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 SLC25A20O43772 301 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 PSMB2P49721 201 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 Q1RN00 199 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 FAM229BQ4G0N7 80 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.49□□□□□ -1.85
ABCF1-207ENST00000542772 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 NAA38Q9BRA0 125 aaKnown RBP3.49□□□□□ -1.85
ABCF1-207ENST00000542772 VPS25Q9BRG1 176 aa3.49□□□□□ -1.85
ABCF1-207ENST00000542772 ZNF706Q9Y5V0 76 aaPredicted RBP3.49□□□□□ -1.85
ABCF1-207ENST00000542772 TEX49A0A1B0GTD5 131 aa3.48□□□□□ -1.85
ABCF1-207ENST00000542772 SNCGO76070 127 aa3.48□□□□□ -1.85
ABCF1-207ENST00000542772 SMIM29Q86T20 159 aa3.48□□□□□ -1.85
ABCF1-207ENST00000542772 Q8N377 158 aa3.48□□□□□ -1.85
ABCF1-207ENST00000542772 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
ABCF1-207ENST00000542772 PPDPFLQ8WWR9 84 aa3.48□□□□□ -1.85
ABCF1-207ENST00000542772 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
ABCF1-207ENST00000542772 TRBV20-1A0A075B6N2 111 aa3.47□□□□□ -1.85
ABCF1-207ENST00000542772 LST1O00453 97 aa3.47□□□□□ -1.85
ABCF1-207ENST00000542772 TRACP01848 142 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms