RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 BCE1O60756 84 aa14.25□□□□□ -0.13
HOMER3-205ENST00000542541 HINT1P49773 126 aaPredicted RBP14.23□□□□□ -0.13
HOMER3-205ENST00000542541 NHP2Q9NX24 153 aaKnown RBP14.23□□□□□ -0.13
HOMER3-205ENST00000542541 ZNF73O43830 326 aaPredicted RBP14.22□□□□□ -0.13
HOMER3-205ENST00000542541 SPRR1AP35321 89 aa14.22□□□□□ -0.13
HOMER3-205ENST00000542541 RPL13AP40429 203 aaKnown RBP14.22□□□□□ -0.13
HOMER3-205ENST00000542541 PRO1854Q9UHT4 67 aa14.21□□□□□ -0.13
HOMER3-205ENST00000542541 IGLV7-43P04211 117 aa14.2□□□□□ -0.14
HOMER3-205ENST00000542541 ETDCA0A1B0GVM5 59 aa14.19□□□□□ -0.14
HOMER3-205ENST00000542541 FAM19A1Q7Z5A9 133 aa14.19□□□□□ -0.14
HOMER3-205ENST00000542541 DIRC1Q969H9 104 aa14.19□□□□□ -0.14
HOMER3-205ENST00000542541 A0A1B0GWB2 263 aa14.18□□□□□ -0.14
HOMER3-205ENST00000542541 UBE2AP49459 152 aa14.18□□□□□ -0.14
HOMER3-205ENST00000542541 KRTAP10-4P60372 401 aaPredicted RBP14.17□□□□□ -0.14
HOMER3-205ENST00000542541 SMIM11BQ8TCY0 68 aa14.17□□□□□ -0.14
HOMER3-205ENST00000542541 KRTAP4-16G5E9R7 235 aaPredicted RBP14.16□□□□□ -0.14
HOMER3-205ENST00000542541 RPL28P46779 137 aaKnown RBP14.16□□□□□ -0.14
HOMER3-205ENST00000542541 C6orf99Q4VX62 202 aa14.15□□□□□ -0.14
HOMER3-205ENST00000542541 H7C2G1 150 aa14.15□□□□□ -0.14
HOMER3-205ENST00000542541 ZNF861PO60384 105 aa14.15□□□□□ -0.14
HOMER3-205ENST00000542541 H0Y9J4 135 aa14.14□□□□□ -0.15
HOMER3-205ENST00000542541 K7ERJ3 54 aa14.13□□□□□ -0.15
HOMER3-205ENST00000542541 Q1RN00 199 aa14.13□□□□□ -0.15
HOMER3-205ENST00000542541 TRBV7-6A0A0J9YX20 115 aa14.12□□□□□ -0.15
HOMER3-205ENST00000542541 B5MCH6 92 aa14.12□□□□□ -0.15
HOMER3-205ENST00000542541 PRLHP81277 87 aa14.12□□□□□ -0.15
HOMER3-205ENST00000542541 KRTAP4-5Q9BYR2 181 aa14.12□□□□□ -0.15
HOMER3-205ENST00000542541 VPS13BQ7Z7G8 4022 aa14.12□□□□□ -0.15
HOMER3-205ENST00000542541 VAMP3Q15836 100 aa14.12□□□□□ -0.15
HOMER3-205ENST00000542541 BATFQ16520 125 aa14.11□□□□□ -0.15
HOMER3-205ENST00000542541 Q6ZRX8 168 aa14.11□□□□□ -0.15
HOMER3-205ENST00000542541 KRTAP13-1Q8IUC0 172 aa14.11□□□□□ -0.15
HOMER3-205ENST00000542541 PCP4L1A6NKN8 68 aa14.1□□□□□ -0.15
HOMER3-205ENST00000542541 COX7BP24311 80 aa14.1□□□□□ -0.15
HOMER3-205ENST00000542541 SPINK6Q6UWN8 80 aa14.1□□□□□ -0.15
HOMER3-205ENST00000542541 ELOF1P60002 83 aaKnown RBP14.08□□□□□ -0.16
HOMER3-205ENST00000542541 HIGD2AQ9BW72 106 aa14.06□□□□□ -0.16
HOMER3-205ENST00000542541 SRRM2Q9UQ35 2752 aaKnown RBP14.05□□□□□ -0.16
HOMER3-205ENST00000542541 ABCA13Q86UQ4 5058 aa14.04□□□□□ -0.16
HOMER3-205ENST00000542541 DHRS4-AS1Q9P1J3 65 aa14.04□□□□□ -0.16
HOMER3-205ENST00000542541 INAFM2P0DMQ5 153 aa14.03□□□□□ -0.16
HOMER3-205ENST00000542541 TSPAN13O95857 204 aa14.02□□□□□ -0.16
HOMER3-205ENST00000542541 PSMB2P49721 201 aa14.02□□□□□ -0.16
HOMER3-205ENST00000542541 Q9BRP9 147 aa14.01□□□□□ -0.17
HOMER3-205ENST00000542541 H0YGX0 51 aa14.01□□□□□ -0.17
HOMER3-205ENST00000542541 SMCR5Q8TEV8 140 aa14.01□□□□□ -0.17
HOMER3-205ENST00000542541 COX6CP09669 75 aa14□□□□□ -0.17
HOMER3-205ENST00000542541 SNHG12Q9BXW3 62 aa13.99□□□□□ -0.17
HOMER3-205ENST00000542541 SLC25A20O43772 301 aa13.98□□□□□ -0.17
HOMER3-205ENST00000542541 TRIAP1O43715 76 aa13.97□□□□□ -0.17
HOMER3-205ENST00000542541 LINC00575Q6W349 94 aa13.96□□□□□ -0.17
HOMER3-205ENST00000542541 SNCGO76070 127 aa13.95□□□□□ -0.18
HOMER3-205ENST00000542541 PKHD1L1Q86WI1 4243 aa13.94□□□□□ -0.18
HOMER3-205ENST00000542541 ZNF706Q9Y5V0 76 aaPredicted RBP13.94□□□□□ -0.18
HOMER3-205ENST00000542541 ERC2-IT1O76042 136 aa13.93□□□□□ -0.18
HOMER3-205ENST00000542541 PCLOQ9Y6V0 5065 aa13.93□□□□□ -0.18
HOMER3-205ENST00000542541 SCGB1C2P0DMR2 95 aa13.93□□□□□ -0.18
HOMER3-205ENST00000542541 hADV29S1A0JD25 119 aa13.92□□□□□ -0.18
HOMER3-205ENST00000542541 COL5A1-AS1Q5SY13 56 aa13.91□□□□□ -0.18
HOMER3-205ENST00000542541 SPRR4Q96PI1 79 aa13.88□□□□□ -0.19
HOMER3-205ENST00000542541 A0A1B0GX51 115 aa13.87□□□□□ -0.19
HOMER3-205ENST00000542541 TAX1BP3O14907 124 aa13.87□□□□□ -0.19
HOMER3-205ENST00000542541 C9orf118A6NHY6 69 aa13.86□□□□□ -0.19
HOMER3-205ENST00000542541 NAA38Q9BRA0 125 aaKnown RBP13.86□□□□□ -0.19
HOMER3-205ENST00000542541 LYRM7Q5U5X0 104 aa13.86□□□□□ -0.19
HOMER3-205ENST00000542541 FAM218AQ96MZ4 157 aa13.86□□□□□ -0.19
HOMER3-205ENST00000542541 H3BUT2 72 aa13.85□□□□□ -0.19
HOMER3-205ENST00000542541 CLEC2BQ92478 149 aa13.85□□□□□ -0.19
HOMER3-205ENST00000542541 GAGE2AQ6NT46 116 aa13.84□□□□□ -0.19
HOMER3-205ENST00000542541 ST20-AS1Q8NBB2 130 aa13.84□□□□□ -0.19
HOMER3-205ENST00000542541 KRTAP1-4P0C5Y4 121 aa13.83□□□□□ -0.2
HOMER3-205ENST00000542541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.83□□□□□ -0.2
HOMER3-205ENST00000542541 Q6ZQY7 126 aa13.82□□□□□ -0.2
HOMER3-205ENST00000542541 FAM229BQ4G0N7 80 aa13.8□□□□□ -0.2
HOMER3-205ENST00000542541 LINC00483Q53H64 154 aa13.8□□□□□ -0.2
HOMER3-205ENST00000542541 MYCBP2O75592 4640 aa13.8□□□□□ -0.2
HOMER3-205ENST00000542541 FLG2Q5D862 2391 aaPredicted RBP13.8□□□□□ -0.2
HOMER3-205ENST00000542541 DEFB105AQ8NG35 78 aa13.79□□□□□ -0.2
HOMER3-205ENST00000542541 TEX49A0A1B0GTD5 131 aa13.79□□□□□ -0.2
HOMER3-205ENST00000542541 DNAL4O96015 105 aa13.79□□□□□ -0.2
HOMER3-205ENST00000542541 OCIAD2Q56VL3 154 aa13.78□□□□□ -0.2
HOMER3-205ENST00000542541 LINC01600Q96MT4 127 aa13.78□□□□□ -0.2
HOMER3-205ENST00000542541 ANAPC11Q9NYG5 84 aa13.78□□□□□ -0.2
HOMER3-205ENST00000542541 IGLV5-48A0A075B6I7 105 aa13.77□□□□□ -0.21
HOMER3-205ENST00000542541 LST1O00453 97 aa13.77□□□□□ -0.21
HOMER3-205ENST00000542541 OXTP01178 125 aa13.77□□□□□ -0.21
HOMER3-205ENST00000542541 GHRHP01286 108 aa13.77□□□□□ -0.21
HOMER3-205ENST00000542541 CRYGAP11844 174 aa13.77□□□□□ -0.21
HOMER3-205ENST00000542541 SPRR1BP22528 89 aa13.77□□□□□ -0.21
HOMER3-205ENST00000542541 TRBV20-1A0A075B6N2 111 aa13.76□□□□□ -0.21
HOMER3-205ENST00000542541 A0A1W2PPM0 123 aa13.76□□□□□ -0.21
HOMER3-205ENST00000542541 TRACP01848 142 aa13.76□□□□□ -0.21
HOMER3-205ENST00000542541 FABP2P12104 132 aa13.75□□□□□ -0.21
HOMER3-205ENST00000542541 ATXN8Q156A1 80 aa13.75□□□□□ -0.21
HOMER3-205ENST00000542541 LRP1Q07954 4544 aaKnown RBP13.73□□□□□ -0.21
HOMER3-205ENST00000542541 TCL1BO95988 128 aa13.73□□□□□ -0.21
HOMER3-205ENST00000542541 LINC01547P58512 204 aaPredicted RBP13.73□□□□□ -0.21
HOMER3-205ENST00000542541 PPDPFLQ8WWR9 84 aa13.73□□□□□ -0.21
HOMER3-205ENST00000542541 FAT3Q8TDW7 4589 aa13.72□□□□□ -0.21
HOMER3-205ENST00000542541 Q8N377 158 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms