RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 TRBV7-6A0A0J9YX20 115 aa7.98□□□□□ -1.13
SMAD3-204ENST00000540846 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
SMAD3-204ENST00000540846 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
SMAD3-204ENST00000540846 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
SMAD3-204ENST00000540846 GAGE2BQ13066 116 aa7.97□□□□□ -1.13
SMAD3-204ENST00000540846 C7orf33Q8WU49 177 aa7.97□□□□□ -1.13
SMAD3-204ENST00000540846 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
SMAD3-204ENST00000540846 FUSP35637 526 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMAD3-204ENST00000540846 FAM168BA1KXE4 195 aa7.96□□□□□ -1.14
SMAD3-204ENST00000540846 SNCGO76070 127 aa7.96□□□□□ -1.14
SMAD3-204ENST00000540846 ELOF1P60002 83 aaKnown RBP7.96□□□□□ -1.14
SMAD3-204ENST00000540846 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
SMAD3-204ENST00000540846 C9orf163Q8N9P6 203 aa7.96□□□□□ -1.14
SMAD3-204ENST00000540846 ORMDL1Q9P0S3 153 aa7.96□□□□□ -1.14
SMAD3-204ENST00000540846 C16orf90A8MZG2 172 aa7.95□□□□□ -1.14
SMAD3-204ENST00000540846 COX7BP24311 80 aa7.95□□□□□ -1.14
SMAD3-204ENST00000540846 C21orf62-AS1Q17RA5 79 aa7.95□□□□□ -1.14
SMAD3-204ENST00000540846 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
SMAD3-204ENST00000540846 A0A096LNI7 61 aa7.94□□□□□ -1.14
SMAD3-204ENST00000540846 hADV29S1A0JD25 119 aa7.94□□□□□ -1.14
SMAD3-204ENST00000540846 SCGB1A1P11684 91 aa7.94□□□□□ -1.14
SMAD3-204ENST00000540846 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
SMAD3-204ENST00000540846 PRYO14603 147 aa7.93□□□□□ -1.14
SMAD3-204ENST00000540846 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-204ENST00000540846 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
SMAD3-204ENST00000540846 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
SMAD3-204ENST00000540846 DNAH5Q8TE73 4624 aa7.92□□□□□ -1.14
SMAD3-204ENST00000540846 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
SMAD3-204ENST00000540846 SDIM1Q6ZPB5 146 aa7.92□□□□□ -1.14
SMAD3-204ENST00000540846 MRPL55Q7Z7F7 128 aaKnown RBP7.92□□□□□ -1.14
SMAD3-204ENST00000540846 OBSCN-AS1Q96MR7 158 aa7.92□□□□□ -1.14
SMAD3-204ENST00000540846 IGLV5-52A0A0A0MRZ9 124 aa7.91□□□□□ -1.14
SMAD3-204ENST00000540846 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.14
SMAD3-204ENST00000540846 INAFM2P0DMQ5 153 aa7.9□□□□□ -1.14
SMAD3-204ENST00000540846 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
SMAD3-204ENST00000540846 FAM240AA0A1B0GVK7 77 aa7.89□□□□□ -1.15
SMAD3-204ENST00000540846 SPRR1AP35321 89 aa7.89□□□□□ -1.15
SMAD3-204ENST00000540846 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
SMAD3-204ENST00000540846 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
SMAD3-204ENST00000540846 H3BQ85 93 aa7.88□□□□□ -1.15
SMAD3-204ENST00000540846 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
SMAD3-204ENST00000540846 Q6ZQY7 126 aa7.88□□□□□ -1.15
SMAD3-204ENST00000540846 SIGMAR1Q99720 223 aa7.88□□□□□ -1.15
SMAD3-204ENST00000540846 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
SMAD3-204ENST00000540846 PANO1I0J062 215 aa7.88□□□□□ -1.15
SMAD3-204ENST00000540846 A0A1W2PNN7 141 aa7.87□□□□□ -1.15
SMAD3-204ENST00000540846 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
SMAD3-204ENST00000540846 Q6ZRX8 168 aa7.86□□□□□ -1.15
SMAD3-204ENST00000540846 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
SMAD3-204ENST00000540846 B5MCH6 92 aa7.85□□□□□ -1.15
SMAD3-204ENST00000540846 JMJD7-PLA2G4BH0Y9G9 81 aa7.85□□□□□ -1.15
SMAD3-204ENST00000540846 KRTAP10-1P60331 282 aa7.85□□□□□ -1.15
SMAD3-204ENST00000540846 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.85□□□□□ -1.15
SMAD3-204ENST00000540846 GHRHP01286 108 aa7.84□□□□□ -1.15
SMAD3-204ENST00000540846 Q6ZSA8 131 aa7.84□□□□□ -1.15
SMAD3-204ENST00000540846 C14orf132Q9NPU4 83 aa7.84□□□□□ -1.15
SMAD3-204ENST00000540846 ETDCA0A1B0GVM5 59 aa7.84□□□□□ -1.15
SMAD3-204ENST00000540846 ACYP1P07311 99 aa7.84□□□□□ -1.15
SMAD3-204ENST00000540846 REG3GQ6UW15 175 aa7.84□□□□□ -1.15
SMAD3-204ENST00000540846 SPACA4Q8TDM5 124 aa7.84□□□□□ -1.15
SMAD3-204ENST00000540846 FAM30AQ9NZY2 134 aa7.83□□□□□ -1.16
SMAD3-204ENST00000540846 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
SMAD3-204ENST00000540846 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
SMAD3-204ENST00000540846 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
SMAD3-204ENST00000540846 A0A1B0GV72 72 aa7.81□□□□□ -1.16
SMAD3-204ENST00000540846 XGP55808 180 aa7.81□□□□□ -1.16
SMAD3-204ENST00000540846 Q9BRP9 147 aa7.81□□□□□ -1.16
SMAD3-204ENST00000540846 GAGE2AQ6NT46 116 aa7.8□□□□□ -1.16
SMAD3-204ENST00000540846 LRP1BQ9NZR2 4599 aa7.8□□□□□ -1.16
SMAD3-204ENST00000540846 DNAH8Q96JB1 4490 aa7.8□□□□□ -1.16
SMAD3-204ENST00000540846 LAMTOR3Q9UHA4 124 aa7.8□□□□□ -1.16
SMAD3-204ENST00000540846 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
SMAD3-204ENST00000540846 LOC110117498A0A087WWA1 95 aa7.77□□□□□ -1.17
SMAD3-204ENST00000540846 MT-ATP8P03928 68 aa7.77□□□□□ -1.17
SMAD3-204ENST00000540846 CCKP06307 115 aa7.77□□□□□ -1.17
SMAD3-204ENST00000540846 RBM3P98179 157 aaKnown RBP7.77□□□□□ -1.17
SMAD3-204ENST00000540846 PLAC8Q9NZF1 115 aa7.77□□□□□ -1.17
SMAD3-204ENST00000540846 EPPK1P58107 5090 aaKnown RBP7.77□□□□□ -1.17
SMAD3-204ENST00000540846 IGLV5-48A0A075B6I7 105 aa7.76□□□□□ -1.17
SMAD3-204ENST00000540846 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
SMAD3-204ENST00000540846 UBE2BP63146 152 aa7.76□□□□□ -1.17
SMAD3-204ENST00000540846 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
SMAD3-204ENST00000540846 KRTAP11-1Q8IUC1 163 aa7.76□□□□□ -1.17
SMAD3-204ENST00000540846 Q6ZQT0 140 aa7.75□□□□□ -1.17
SMAD3-204ENST00000540846 SCXQ7RTU7 201 aa7.75□□□□□ -1.17
SMAD3-204ENST00000540846 Q8N377 158 aa7.75□□□□□ -1.17
SMAD3-204ENST00000540846 CIRBP-AS1Q8TBR5 109 aa7.75□□□□□ -1.17
SMAD3-204ENST00000540846 SMCR5Q8TEV8 140 aa7.75□□□□□ -1.17
SMAD3-204ENST00000540846 TRBV7-4A0A0J9YYF1 115 aa7.74□□□□□ -1.17
SMAD3-204ENST00000540846 ERC2-IT1O76042 136 aa7.74□□□□□ -1.17
SMAD3-204ENST00000540846 PDE6GP18545 87 aa7.74□□□□□ -1.17
SMAD3-204ENST00000540846 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
SMAD3-204ENST00000540846 H0Y9J4 135 aa7.73□□□□□ -1.17
SMAD3-204ENST00000540846 HAMPP81172 84 aa7.73□□□□□ -1.17
SMAD3-204ENST00000540846 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
SMAD3-204ENST00000540846 APOBP04114 4563 aaKnown RBP7.73□□□□□ -1.17
SMAD3-204ENST00000540846 PRLHP81277 87 aa7.72□□□□□ -1.17
SMAD3-204ENST00000540846 ST20-AS1Q8NBB2 130 aa7.72□□□□□ -1.17
SMAD3-204ENST00000540846 LINC00643Q86TS7 51 aa7.71□□□□□ -1.17
SMAD3-204ENST00000540846 DEFB105AQ8NG35 78 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms