RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 C9orf116Q5BN46 136 aaPredicted RBP3.63□□□□□ -1.83
PROM1-220ENST00000540805 SCXQ7RTU7 201 aa3.63□□□□□ -1.83
PROM1-220ENST00000540805 LELP1Q5T871 98 aa3.62□□□□□ -1.83
PROM1-220ENST00000540805 UNQ6190/PRO20217Q6UXQ8 127 aa3.62□□□□□ -1.83
PROM1-220ENST00000540805 PRR3P79522 188 aaKnown RBP3.62□□□□□ -1.83
PROM1-220ENST00000540805 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
PROM1-220ENST00000540805 IGLV9-49A0A0B4J1Y8 123 aa3.62□□□□□ -1.83
PROM1-220ENST00000540805 TRBV10-3A0A0K0K1G6 114 aa3.62□□□□□ -1.83
PROM1-220ENST00000540805 IGHV3OR16-9A0A0B4J2B5 98 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 TMEM256-PLSCR3K7ERE1 68 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 WFDC10BQ8IUB3 73 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 IGLV4-60A0A075B6I1 120 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 NUPR2A6NF83 97 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 CD164L2Q6UWJ8 174 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 C6orf223Q8N319 242 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 Q8N814 137 aa3.61□□□□□ -1.83
PROM1-220ENST00000540805 CSMD3Q7Z407 3707 aa3.6□□□□□ -1.83
PROM1-220ENST00000540805 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
PROM1-220ENST00000540805 C3orf84H3BNL1 204 aa3.6□□□□□ -1.83
PROM1-220ENST00000540805 SERP1Q9Y6X1 66 aa3.6□□□□□ -1.83
PROM1-220ENST00000540805 Q6ZQY7 126 aa3.6□□□□□ -1.83
PROM1-220ENST00000540805 TM2D3Q9BRN9 247 aa3.6□□□□□ -1.83
PROM1-220ENST00000540805 TRAV7A0A075B6U4 112 aa3.59□□□□□ -1.83
PROM1-220ENST00000540805 EPM2AB3EWF7 344 aa3.59□□□□□ -1.83
PROM1-220ENST00000540805 BCE1O60756 84 aa3.59□□□□□ -1.83
PROM1-220ENST00000540805 PKD1L1Q8TDX9 2849 aa3.59□□□□□ -1.83
PROM1-220ENST00000540805 IGLV5-52A0A0A0MRZ9 124 aa3.59□□□□□ -1.84
PROM1-220ENST00000540805 Q8N9L7 120 aa3.58□□□□□ -1.84
PROM1-220ENST00000540805 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
PROM1-220ENST00000540805 C1orf134Q5TEV5 83 aa3.58□□□□□ -1.84
PROM1-220ENST00000540805 Q8IZM0 81 aa3.58□□□□□ -1.84
PROM1-220ENST00000540805 BPY2O14599 106 aa3.58□□□□□ -1.84
PROM1-220ENST00000540805 LYSTQ99698 3801 aa3.58□□□□□ -1.84
PROM1-220ENST00000540805 CELA1Q9UNI1 258 aa3.58□□□□□ -1.84
PROM1-220ENST00000540805 DNAH1Q9P2D7 4330 aa3.57□□□□□ -1.84
PROM1-220ENST00000540805 PLAC8L1A1L4L8 177 aa3.57□□□□□ -1.84
PROM1-220ENST00000540805 KRTAP10-3P60369 221 aa3.57□□□□□ -1.84
PROM1-220ENST00000540805 Q6ZQT0 140 aa3.57□□□□□ -1.84
PROM1-220ENST00000540805 CIRBP-AS1Q8TBR5 109 aa3.57□□□□□ -1.84
PROM1-220ENST00000540805 MP68P56378 58 aa3.57□□□□□ -1.84
PROM1-220ENST00000540805 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
PROM1-220ENST00000540805 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
PROM1-220ENST00000540805 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.56□□□□□ -1.84
PROM1-220ENST00000540805 LOC110117498A0A087WWA1 95 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 PSPHP1O15172 72 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 MDFIQ99750 246 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 LINC00575Q6W349 94 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 Q6ZVQ6 151 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 WFDC13Q8IUB5 93 aa3.56□□□□□ -1.84
PROM1-220ENST00000540805 PRR4Q16378 134 aa3.55□□□□□ -1.84
PROM1-220ENST00000540805 COX17Q14061 63 aa3.55□□□□□ -1.84
PROM1-220ENST00000540805 C1orf137Q5JT78 98 aa3.55□□□□□ -1.84
PROM1-220ENST00000540805 TENM3Q9P273 2699 aa3.55□□□□□ -1.84
PROM1-220ENST00000540805 PDE6GP18545 87 aa3.54□□□□□ -1.84
PROM1-220ENST00000540805 CXCL6P80162 114 aa3.54□□□□□ -1.84
PROM1-220ENST00000540805 ATP5EP56381 51 aaPredicted RBP3.54□□□□□ -1.84
PROM1-220ENST00000540805 M0R378 163 aa3.54□□□□□ -1.84
PROM1-220ENST00000540805 NDUFC1O43677 76 aa3.54□□□□□ -1.84
PROM1-220ENST00000540805 GIG44P09565 113 aaPredicted RBP3.54□□□□□ -1.84
PROM1-220ENST00000540805 CASC2Q6XLA1 102 aa3.54□□□□□ -1.84
PROM1-220ENST00000540805 C19orf73Q9NVV2 129 aa3.54□□□□□ -1.84
PROM1-220ENST00000540805 A0A1B0GUV1 79 aa3.53□□□□□ -1.84
PROM1-220ENST00000540805 H3BQ85 93 aa3.53□□□□□ -1.84
PROM1-220ENST00000540805 ZNF73O43830 326 aaPredicted RBP3.53□□□□□ -1.84
PROM1-220ENST00000540805 ESRGQ1W209 222 aa3.53□□□□□ -1.84
PROM1-220ENST00000540805 Q8N3U1 123 aa3.53□□□□□ -1.84
PROM1-220ENST00000540805 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
PROM1-220ENST00000540805 KIAA0087Q14695 138 aa3.53□□□□□ -1.84
PROM1-220ENST00000540805 PRLHP81277 87 aa3.53□□□□□ -1.84
PROM1-220ENST00000540805 RETNLBQ9BQ08 111 aa3.52□□□□□ -1.85
PROM1-220ENST00000540805 Q8NDZ9 215 aa3.52□□□□□ -1.85
PROM1-220ENST00000540805 MUC7Q8TAX7 377 aa3.52□□□□□ -1.85
PROM1-220ENST00000540805 DEFB116Q30KQ4 102 aa3.52□□□□□ -1.85
PROM1-220ENST00000540805 TRBV7-4A0A0J9YYF1 115 aa3.51□□□□□ -1.85
PROM1-220ENST00000540805 EGFEM1PQ0D2K5 195 aa3.51□□□□□ -1.85
PROM1-220ENST00000540805 Q6ZRU5 148 aa3.51□□□□□ -1.85
PROM1-220ENST00000540805 DNAH7Q8WXX0 4024 aa3.51□□□□□ -1.85
PROM1-220ENST00000540805 CSNK1G2-AS1Q8NCQ2 148 aa3.51□□□□□ -1.85
PROM1-220ENST00000540805 FAM30AQ9NZY2 134 aa3.51□□□□□ -1.85
PROM1-220ENST00000540805 X6R8D5 127 aa3.51□□□□□ -1.85
PROM1-220ENST00000540805 C16orf90A8MZG2 172 aa3.5□□□□□ -1.85
PROM1-220ENST00000540805 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
PROM1-220ENST00000540805 TMEM254Q8TBM7 123 aa3.5□□□□□ -1.85
PROM1-220ENST00000540805 HUWE1Q7Z6Z7 4374 aaKnown RBP3.5□□□□□ -1.85
PROM1-220ENST00000540805 COL7A1Q02388 2944 aa3.5□□□□□ -1.85
PROM1-220ENST00000540805 SRRM2Q9UQ35 2752 aaKnown RBP3.5□□□□□ -1.85
PROM1-220ENST00000540805 DYNC2H1Q8NCM8 4307 aaKnown RBP3.5□□□□□ -1.85
PROM1-220ENST00000540805 Q6ZRP5 223 aa3.5□□□□□ -1.85
PROM1-220ENST00000540805 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
PROM1-220ENST00000540805 C10orf25Q5T742 122 aa3.49□□□□□ -1.85
PROM1-220ENST00000540805 CHTF8P0CG12 524 aa3.49□□□□□ -1.85
PROM1-220ENST00000540805 LINC00612Q8N6U2 182 aa3.49□□□□□ -1.85
PROM1-220ENST00000540805 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
PROM1-220ENST00000540805 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
PROM1-220ENST00000540805 ZNF706Q9Y5V0 76 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms