RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
UBE3B-211ENST00000539843 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
UBE3B-211ENST00000539843 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
UBE3B-211ENST00000539843 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
UBE3B-211ENST00000539843 Q9BRP9 147 aa8.63□□□□□ -1.03
UBE3B-211ENST00000539843 C5orf52A6NGY3 159 aa8.62□□□□□ -1.03
UBE3B-211ENST00000539843 NPC2P61916 151 aa8.62□□□□□ -1.03
UBE3B-211ENST00000539843 SLC25A34Q6PIV7 304 aa8.62□□□□□ -1.03
UBE3B-211ENST00000539843 Q8N377 158 aa8.61□□□□□ -1.03
UBE3B-211ENST00000539843 FAT4Q6V0I7 4981 aa8.6□□□□□ -1.03
UBE3B-211ENST00000539843 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
UBE3B-211ENST00000539843 E9PLD3 99 aa8.6□□□□□ -1.03
UBE3B-211ENST00000539843 LINC01547P58512 204 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-211ENST00000539843 LINC00310P59036 64 aa8.6□□□□□ -1.03
UBE3B-211ENST00000539843 OR13C6PQ8NH95 151 aa8.59□□□□□ -1.03
UBE3B-211ENST00000539843 LIMD2Q9BT23 127 aa8.58□□□□□ -1.04
UBE3B-211ENST00000539843 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
UBE3B-211ENST00000539843 DHRS4-AS1Q9P1J3 65 aa8.57□□□□□ -1.04
UBE3B-211ENST00000539843 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
UBE3B-211ENST00000539843 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
UBE3B-211ENST00000539843 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
UBE3B-211ENST00000539843 TIMM17BO60830 172 aa8.54□□□□□ -1.04
UBE3B-211ENST00000539843 ST20-AS1Q8NBB2 130 aa8.54□□□□□ -1.04
UBE3B-211ENST00000539843 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
UBE3B-211ENST00000539843 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
UBE3B-211ENST00000539843 SYS1-DBNDD2H3BUS1 97 aa8.53□□□□□ -1.04
UBE3B-211ENST00000539843 LINC00518Q8N0U6 118 aa8.53□□□□□ -1.04
UBE3B-211ENST00000539843 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
UBE3B-211ENST00000539843 COLCA2A8K830 154 aa8.52□□□□□ -1.05
UBE3B-211ENST00000539843 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
UBE3B-211ENST00000539843 SPRR1BP22528 89 aa8.5□□□□□ -1.05
UBE3B-211ENST00000539843 COX7BP24311 80 aa8.5□□□□□ -1.05
UBE3B-211ENST00000539843 XP32Q5T750 250 aa8.5□□□□□ -1.05
UBE3B-211ENST00000539843 PET117Q6UWS5 81 aa8.5□□□□□ -1.05
UBE3B-211ENST00000539843 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
UBE3B-211ENST00000539843 TAL2Q16559 108 aa8.49□□□□□ -1.05
UBE3B-211ENST00000539843 LINC01545Q5VT33 79 aa8.48□□□□□ -1.05
UBE3B-211ENST00000539843 HRCT1Q6UXD1 115 aa8.48□□□□□ -1.05
UBE3B-211ENST00000539843 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
UBE3B-211ENST00000539843 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
UBE3B-211ENST00000539843 LITAFQ99732 161 aa8.47□□□□□ -1.05
UBE3B-211ENST00000539843 C6orf99Q4VX62 202 aa8.46□□□□□ -1.06
UBE3B-211ENST00000539843 PRO1933Q9H354 126 aa8.46□□□□□ -1.06
UBE3B-211ENST00000539843 C20orf202A1L168 122 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BKO60814 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BJP06899 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BOP23527 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BBP33778 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BDP58876 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BCP62807 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST2H2BEQ16778 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.45□□□□□ -1.06
UBE3B-211ENST00000539843 SLC7A5P1Q8MH63 180 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 DEFB105AQ8NG35 78 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BHQ93079 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BNQ99877 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 HIST1H2BMQ99879 126 aa8.45□□□□□ -1.06
UBE3B-211ENST00000539843 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
UBE3B-211ENST00000539843 CD164Q04900 197 aa8.44□□□□□ -1.06
UBE3B-211ENST00000539843 H7C2G1 150 aa8.43□□□□□ -1.06
UBE3B-211ENST00000539843 Q1RN00 199 aa8.43□□□□□ -1.06
UBE3B-211ENST00000539843 TRBV7-6A0A0J9YX20 115 aa8.42□□□□□ -1.06
UBE3B-211ENST00000539843 KRTAP9-6A0A140TA67 174 aa8.42□□□□□ -1.06
UBE3B-211ENST00000539843 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
UBE3B-211ENST00000539843 A6NDN8 102 aa8.41□□□□□ -1.06
UBE3B-211ENST00000539843 IFITM1P13164 125 aa8.41□□□□□ -1.06
UBE3B-211ENST00000539843 AKR1D1P51857 326 aa8.41□□□□□ -1.06
UBE3B-211ENST00000539843 KRTDAPP60985 99 aa8.41□□□□□ -1.06
UBE3B-211ENST00000539843 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
UBE3B-211ENST00000539843 NHP2Q9NX24 153 aaKnown RBP8.41□□□□□ -1.06
UBE3B-211ENST00000539843 Q6ZVH6 145 aa8.4□□□□□ -1.06
UBE3B-211ENST00000539843 A4D1N5 150 aa8.39□□□□□ -1.07
UBE3B-211ENST00000539843 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
UBE3B-211ENST00000539843 C3orf79P0CE67 100 aa8.39□□□□□ -1.07
UBE3B-211ENST00000539843 TTTY13Q9BZ97 58 aa8.39□□□□□ -1.07
UBE3B-211ENST00000539843 IGLV8-61A0A075B6I0 122 aa8.37□□□□□ -1.07
UBE3B-211ENST00000539843 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
UBE3B-211ENST00000539843 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
UBE3B-211ENST00000539843 F8WEM9 126 aa8.35□□□□□ -1.07
UBE3B-211ENST00000539843 Q5XG85 94 aa8.35□□□□□ -1.07
UBE3B-211ENST00000539843 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
UBE3B-211ENST00000539843 TCL1BO95988 128 aa8.33□□□□□ -1.08
UBE3B-211ENST00000539843 VAMP3Q15836 100 aa8.32□□□□□ -1.08
UBE3B-211ENST00000539843 COA6Q5JTJ3 125 aaKnown RBP8.32□□□□□ -1.08
UBE3B-211ENST00000539843 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
UBE3B-211ENST00000539843 CFC1BP0CG36 223 aa8.31□□□□□ -1.08
UBE3B-211ENST00000539843 SNRPEP62304 92 aaKnown RBP8.31□□□□□ -1.08
UBE3B-211ENST00000539843 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
UBE3B-211ENST00000539843 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
UBE3B-211ENST00000539843 ATOH7Q8N100 152 aa8.3□□□□□ -1.08
UBE3B-211ENST00000539843 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
UBE3B-211ENST00000539843 HSBP1L1C9JCN9 74 aa8.27□□□□□ -1.09
UBE3B-211ENST00000539843 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
UBE3B-211ENST00000539843 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.09
UBE3B-211ENST00000539843 RPL37P61927 97 aaKnown RBP8.24□□□□□ -1.09
UBE3B-211ENST00000539843 Q6JHZ5 121 aa8.24□□□□□ -1.09
UBE3B-211ENST00000539843 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
UBE3B-211ENST00000539843 S100A2P29034 98 aa8.22□□□□□ -1.09
UBE3B-211ENST00000539843 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
UBE3B-211ENST00000539843 A0A0G2JQZ4 141 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms