RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.1□□□□□ -0.31
PACSIN3-211ENST00000539589 GHRHP01286 108 aa13.1□□□□□ -0.31
PACSIN3-211ENST00000539589 CCKP06307 115 aa13.1□□□□□ -0.31
PACSIN3-211ENST00000539589 TRBV7-7A0A0K0K1E9 115 aa13.09□□□□□ -0.31
PACSIN3-211ENST00000539589 C7orf33Q8WU49 177 aa13.08□□□□□ -0.31
PACSIN3-211ENST00000539589 KCNQ1DNQ9H478 68 aa13.08□□□□□ -0.32
PACSIN3-211ENST00000539589 LAMTOR3Q9UHA4 124 aa13.08□□□□□ -0.32
PACSIN3-211ENST00000539589 LOC107984640A0A0U1RRK4 108 aa13.07□□□□□ -0.32
PACSIN3-211ENST00000539589 M0R2N4 97 aa13.07□□□□□ -0.32
PACSIN3-211ENST00000539589 LINC00528Q8N1L1 170 aa13.06□□□□□ -0.32
PACSIN3-211ENST00000539589 IGLV5-37A0A075B6J1 123 aa13.06□□□□□ -0.32
PACSIN3-211ENST00000539589 PSCAO43653 123 aa13.06□□□□□ -0.32
PACSIN3-211ENST00000539589 RBM3P98179 157 aaKnown RBP13.06□□□□□ -0.32
PACSIN3-211ENST00000539589 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
PACSIN3-211ENST00000539589 DNAH17Q9UFH2 4485 aa13.05□□□□□ -0.32
PACSIN3-211ENST00000539589 Q6ZRN7 208 aaPredicted RBP13.05□□□□□ -0.32
PACSIN3-211ENST00000539589 LINC00846Q9NV44 126 aa13.04□□□□□ -0.32
PACSIN3-211ENST00000539589 FAM168BA1KXE4 195 aa13.03□□□□□ -0.32
PACSIN3-211ENST00000539589 HYDINQ4G0P3 5121 aa13.01□□□□□ -0.33
PACSIN3-211ENST00000539589 NDUFV3P56181 108 aaKnown RBP13.01□□□□□ -0.33
PACSIN3-211ENST00000539589 Q6ZR54 194 aa13□□□□□ -0.33
PACSIN3-211ENST00000539589 ANAPC13Q9BS18 74 aa13□□□□□ -0.33
PACSIN3-211ENST00000539589 LOC110117498A0A087WWA1 95 aa13□□□□□ -0.33
PACSIN3-211ENST00000539589 CNBPP62633 177 aaKnown RBP13□□□□□ -0.33
PACSIN3-211ENST00000539589 IGLV1-50A0A075B6I6 118 aa12.99□□□□□ -0.33
PACSIN3-211ENST00000539589 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
PACSIN3-211ENST00000539589 LRCOL1A6NCL2 159 aa12.98□□□□□ -0.33
PACSIN3-211ENST00000539589 RPL37AP8A6NKH3 93 aa12.98□□□□□ -0.33
PACSIN3-211ENST00000539589 PRYO14603 147 aa12.98□□□□□ -0.33
PACSIN3-211ENST00000539589 C14orf177Q52M58 125 aa12.98□□□□□ -0.33
PACSIN3-211ENST00000539589 DSCR8Q96T75 97 aa12.98□□□□□ -0.33
PACSIN3-211ENST00000539589 Q6ZQT0 140 aa12.98□□□□□ -0.33
PACSIN3-211ENST00000539589 KRTAP7-1Q8IUC3 87 aa12.98□□□□□ -0.33
PACSIN3-211ENST00000539589 LY6G6CO95867 125 aa12.97□□□□□ -0.33
PACSIN3-211ENST00000539589 PDE6GP18545 87 aa12.97□□□□□ -0.33
PACSIN3-211ENST00000539589 FAM19A5Q7Z5A7 132 aaPredicted RBP12.97□□□□□ -0.33
PACSIN3-211ENST00000539589 HECTD4Q9Y4D8 3996 aa12.97□□□□□ -0.33
PACSIN3-211ENST00000539589 FRAS1Q86XX4 4008 aa12.97□□□□□ -0.33
PACSIN3-211ENST00000539589 MRPL55Q7Z7F7 128 aaKnown RBP12.96□□□□□ -0.33
PACSIN3-211ENST00000539589 LINC00476Q8WZB0 136 aa12.96□□□□□ -0.34
PACSIN3-211ENST00000539589 Q6JHZ5 121 aa12.95□□□□□ -0.34
PACSIN3-211ENST00000539589 C3orf84H3BNL1 204 aa12.95□□□□□ -0.34
PACSIN3-211ENST00000539589 C16orf90A8MZG2 172 aa12.93□□□□□ -0.34
PACSIN3-211ENST00000539589 SPRR1AP35321 89 aa12.93□□□□□ -0.34
PACSIN3-211ENST00000539589 DHRS4-AS1Q9P1J3 65 aa12.93□□□□□ -0.34
PACSIN3-211ENST00000539589 Q6ZRX8 168 aa12.93□□□□□ -0.34
PACSIN3-211ENST00000539589 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.92□□□□□ -0.34
PACSIN3-211ENST00000539589 ETDCA0A1B0GVM5 59 aa12.92□□□□□ -0.34
PACSIN3-211ENST00000539589 KRTAP4-16G5E9R7 235 aaPredicted RBP12.92□□□□□ -0.34
PACSIN3-211ENST00000539589 B5MCH6 92 aa12.91□□□□□ -0.34
PACSIN3-211ENST00000539589 DNAH11Q96DT5 4516 aa12.91□□□□□ -0.34
PACSIN3-211ENST00000539589 A0A096LNI7 61 aa12.9□□□□□ -0.34
PACSIN3-211ENST00000539589 UBL5Q9BZL1 73 aa12.89□□□□□ -0.35
PACSIN3-211ENST00000539589 IGKV3D-7A0A0C4DH55 119 aa12.89□□□□□ -0.35
PACSIN3-211ENST00000539589 TRBV7-4A0A0J9YYF1 115 aa12.89□□□□□ -0.35
PACSIN3-211ENST00000539589 FAM236AA0A1B0GUQ0 79 aa12.88□□□□□ -0.35
PACSIN3-211ENST00000539589 FAM236BA0A1B0GV22 79 aa12.88□□□□□ -0.35
PACSIN3-211ENST00000539589 IGKV2-24A0A0C4DH68 120 aa12.88□□□□□ -0.35
PACSIN3-211ENST00000539589 Q9BRP9 147 aa12.86□□□□□ -0.35
PACSIN3-211ENST00000539589 ATP5EP2Q5VTU8 51 aa12.86□□□□□ -0.35
PACSIN3-211ENST00000539589 FAT2Q9NYQ8 4349 aa12.86□□□□□ -0.35
PACSIN3-211ENST00000539589 REG3GQ6UW15 175 aa12.85□□□□□ -0.35
PACSIN3-211ENST00000539589 A0A087WTM6 91 aa12.84□□□□□ -0.35
PACSIN3-211ENST00000539589 DEFB105AQ8NG35 78 aa12.84□□□□□ -0.35
PACSIN3-211ENST00000539589 DNAH5Q8TE73 4624 aa12.84□□□□□ -0.35
PACSIN3-211ENST00000539589 C1orf134Q5TEV5 83 aa12.83□□□□□ -0.36
PACSIN3-211ENST00000539589 Q8N377 158 aa12.83□□□□□ -0.36
PACSIN3-211ENST00000539589 PKIGQ9Y2B9 76 aa12.83□□□□□ -0.36
PACSIN3-211ENST00000539589 A0A1W2PNN7 141 aa12.83□□□□□ -0.36
PACSIN3-211ENST00000539589 C9orf163Q8N9P6 203 aa12.81□□□□□ -0.36
PACSIN3-211ENST00000539589 LINC01547P58512 204 aaPredicted RBP12.8□□□□□ -0.36
PACSIN3-211ENST00000539589 UBE2BP63146 152 aa12.79□□□□□ -0.36
PACSIN3-211ENST00000539589 FUSP35637 526 aaKnown RBP eCLIP12.78□□□□□ -0.36
PACSIN3-211ENST00000539589 IGLV5-48A0A075B6I7 105 aa12.77□□□□□ -0.37
PACSIN3-211ENST00000539589 HIST1H4AP62805 103 aaKnown RBP12.77□□□□□ -0.37
PACSIN3-211ENST00000539589 Q6ZVQ6 151 aa12.76□□□□□ -0.37
PACSIN3-211ENST00000539589 CHTF8P0CG12 524 aa12.76□□□□□ -0.37
PACSIN3-211ENST00000539589 ST20-AS1Q8NBB2 130 aa12.76□□□□□ -0.37
PACSIN3-211ENST00000539589 PKD1P98161 4303 aa12.75□□□□□ -0.37
PACSIN3-211ENST00000539589 DNAH8Q96JB1 4490 aa12.75□□□□□ -0.37
PACSIN3-211ENST00000539589 ERC2-IT1O76042 136 aa12.74□□□□□ -0.37
PACSIN3-211ENST00000539589 LINC00474Q9P2X8 69 aa12.74□□□□□ -0.37
PACSIN3-211ENST00000539589 TNP2Q05952 138 aa12.73□□□□□ -0.37
PACSIN3-211ENST00000539589 A0A087WVE0 104 aa12.72□□□□□ -0.37
PACSIN3-211ENST00000539589 RTL8CO15255 209 aa12.72□□□□□ -0.37
PACSIN3-211ENST00000539589 CCDC179H3BU77 68 aa12.72□□□□□ -0.37
PACSIN3-211ENST00000539589 FAM19A1Q7Z5A9 133 aa12.72□□□□□ -0.37
PACSIN3-211ENST00000539589 HAMPP81172 84 aa12.71□□□□□ -0.37
PACSIN3-211ENST00000539589 C3orf22Q8N5N4 141 aa12.71□□□□□ -0.37
PACSIN3-211ENST00000539589 ATOX1O00244 68 aa12.71□□□□□ -0.38
PACSIN3-211ENST00000539589 PANO1I0J062 215 aa12.7□□□□□ -0.38
PACSIN3-211ENST00000539589 PHF5AQ7RTV0 110 aaKnown RBP12.7□□□□□ -0.38
PACSIN3-211ENST00000539589 PRLHP81277 87 aa12.68□□□□□ -0.38
PACSIN3-211ENST00000539589 CXCL6P80162 114 aa12.67□□□□□ -0.38
PACSIN3-211ENST00000539589 RYR2Q92736 4967 aa12.65□□□□□ -0.38
PACSIN3-211ENST00000539589 KMT2CQ8NEZ4 4911 aaKnown RBP12.65□□□□□ -0.38
PACSIN3-211ENST00000539589 C1orf137Q5JT78 98 aa12.64□□□□□ -0.39
PACSIN3-211ENST00000539589 DPH3Q96FX2 82 aa12.64□□□□□ -0.39
PACSIN3-211ENST00000539589 HIGD2AQ9BW72 106 aa12.64□□□□□ -0.39
PACSIN3-211ENST00000539589 A0A1B0GW54 56 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms