RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PRYO14603 147 aa11.57□□□□□ -0.56
GNE-204ENST00000539208 M0R2N4 97 aa11.57□□□□□ -0.56
GNE-204ENST00000539208 KRTAP4-16G5E9R7 235 aaPredicted RBP11.55□□□□□ -0.56
GNE-204ENST00000539208 FAM168BA1KXE4 195 aa11.55□□□□□ -0.56
GNE-204ENST00000539208 UQCRQO14949 82 aa11.55□□□□□ -0.56
GNE-204ENST00000539208 SPRR1AP35321 89 aa11.55□□□□□ -0.56
GNE-204ENST00000539208 C3orf22Q8N5N4 141 aa11.55□□□□□ -0.56
GNE-204ENST00000539208 A0A087WVE0 104 aa11.54□□□□□ -0.56
GNE-204ENST00000539208 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
GNE-204ENST00000539208 DHRS4-AS1Q9P1J3 65 aa11.54□□□□□ -0.56
GNE-204ENST00000539208 Q6ZRX8 168 aa11.53□□□□□ -0.56
GNE-204ENST00000539208 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
GNE-204ENST00000539208 KRTAP1-5Q9BYS1 174 aa11.52□□□□□ -0.56
GNE-204ENST00000539208 MGAM2Q2M2H8 2515 aa11.52□□□□□ -0.56
GNE-204ENST00000539208 COX7CP15954 63 aa11.52□□□□□ -0.57
GNE-204ENST00000539208 Q6ZVQ6 151 aa11.52□□□□□ -0.57
GNE-204ENST00000539208 B9D2Q9BPU9 175 aa11.52□□□□□ -0.57
GNE-204ENST00000539208 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
GNE-204ENST00000539208 MRPL55Q7Z7F7 128 aaKnown RBP11.51□□□□□ -0.57
GNE-204ENST00000539208 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
GNE-204ENST00000539208 MDFIQ99750 246 aa11.5□□□□□ -0.57
GNE-204ENST00000539208 LINC01547P58512 204 aaPredicted RBP11.49□□□□□ -0.57
GNE-204ENST00000539208 Q8N377 158 aa11.49□□□□□ -0.57
GNE-204ENST00000539208 ETDCA0A1B0GVM5 59 aa11.48□□□□□ -0.57
GNE-204ENST00000539208 FAM19A1Q7Z5A9 133 aa11.48□□□□□ -0.57
GNE-204ENST00000539208 CXCL6P80162 114 aa11.48□□□□□ -0.57
GNE-204ENST00000539208 UBE2DNLQ8IWF7 75 aa11.48□□□□□ -0.57
GNE-204ENST00000539208 Q9BRP9 147 aa11.48□□□□□ -0.57
GNE-204ENST00000539208 FAM19A5Q7Z5A7 132 aaPredicted RBP11.47□□□□□ -0.57
GNE-204ENST00000539208 SS18L2Q9UHA2 77 aa11.47□□□□□ -0.57
GNE-204ENST00000539208 C9orf153Q5TBE3 101 aa11.46□□□□□ -0.57
GNE-204ENST00000539208 IGLV5-48A0A075B6I7 105 aa11.45□□□□□ -0.58
GNE-204ENST00000539208 SERP2Q8N6R1 65 aa11.45□□□□□ -0.58
GNE-204ENST00000539208 COL7A1Q02388 2944 aa11.45□□□□□ -0.58
GNE-204ENST00000539208 HAMPP81172 84 aa11.45□□□□□ -0.58
GNE-204ENST00000539208 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
GNE-204ENST00000539208 PSCAO43653 123 aa11.44□□□□□ -0.58
GNE-204ENST00000539208 DEFB105AQ8NG35 78 aa11.44□□□□□ -0.58
GNE-204ENST00000539208 CRYGAP11844 174 aa11.43□□□□□ -0.58
GNE-204ENST00000539208 C14orf177Q52M58 125 aa11.43□□□□□ -0.58
GNE-204ENST00000539208 STAB2Q8WWQ8 2551 aa11.43□□□□□ -0.58
GNE-204ENST00000539208 REG3GQ6UW15 175 aa11.41□□□□□ -0.58
GNE-204ENST00000539208 A0A096LNI7 61 aa11.41□□□□□ -0.58
GNE-204ENST00000539208 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.58
GNE-204ENST00000539208 BCE1O60756 84 aa11.4□□□□□ -0.58
GNE-204ENST00000539208 DYNC2H1Q8NCM8 4307 aaKnown RBP11.39□□□□□ -0.59
GNE-204ENST00000539208 A0A1B0GW54 56 aa11.38□□□□□ -0.59
GNE-204ENST00000539208 TNP2Q05952 138 aa11.38□□□□□ -0.59
GNE-204ENST00000539208 NUPR2A6NF83 97 aa11.37□□□□□ -0.59
GNE-204ENST00000539208 ST20-AS1Q8NBB2 130 aa11.37□□□□□ -0.59
GNE-204ENST00000539208 UBE2BP63146 152 aa11.36□□□□□ -0.59
GNE-204ENST00000539208 A0A1W2PNN7 141 aa11.35□□□□□ -0.59
GNE-204ENST00000539208 ERC2-IT1O76042 136 aa11.35□□□□□ -0.59
GNE-204ENST00000539208 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
GNE-204ENST00000539208 NBDYA0A0U1RRE5 68 aa11.34□□□□□ -0.59
GNE-204ENST00000539208 NREPQ16612 68 aa11.33□□□□□ -0.6
GNE-204ENST00000539208 LYSTQ99698 3801 aa11.32□□□□□ -0.6
GNE-204ENST00000539208 LRCOL1A6NCL2 159 aa11.32□□□□□ -0.6
GNE-204ENST00000539208 PKIGQ9Y2B9 76 aa11.32□□□□□ -0.6
GNE-204ENST00000539208 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.31□□□□□ -0.6
GNE-204ENST00000539208 FUSP35637 526 aaKnown RBP eCLIP11.31□□□□□ -0.6
GNE-204ENST00000539208 C1orf137Q5JT78 98 aa11.31□□□□□ -0.6
GNE-204ENST00000539208 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
GNE-204ENST00000539208 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
GNE-204ENST00000539208 A0A1W2PNM2 257 aa11.3□□□□□ -0.6
GNE-204ENST00000539208 SCXQ7RTU7 201 aa11.3□□□□□ -0.6
GNE-204ENST00000539208 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
GNE-204ENST00000539208 SMIM29Q86T20 159 aa11.28□□□□□ -0.6
GNE-204ENST00000539208 C3orf84H3BNL1 204 aa11.28□□□□□ -0.6
GNE-204ENST00000539208 Q8NBF4 154 aa11.28□□□□□ -0.6
GNE-204ENST00000539208 DNAH10Q8IVF4 4471 aa11.28□□□□□ -0.6
GNE-204ENST00000539208 TRAV7A0A075B6U4 112 aa11.27□□□□□ -0.6
GNE-204ENST00000539208 SPRR4Q96PI1 79 aa11.27□□□□□ -0.6
GNE-204ENST00000539208 CSMD3Q7Z407 3707 aa11.27□□□□□ -0.61
GNE-204ENST00000539208 CYSTM1Q9H1C7 97 aa11.25□□□□□ -0.61
GNE-204ENST00000539208 BPY2O14599 106 aa11.24□□□□□ -0.61
GNE-204ENST00000539208 CHTF8P0CG12 524 aa11.24□□□□□ -0.61
GNE-204ENST00000539208 LINC00474Q9P2X8 69 aa11.24□□□□□ -0.61
GNE-204ENST00000539208 H0Y9J4 135 aa11.24□□□□□ -0.61
GNE-204ENST00000539208 PRLHP81277 87 aa11.24□□□□□ -0.61
GNE-204ENST00000539208 IGKV4-1P06312 121 aa11.23□□□□□ -0.61
GNE-204ENST00000539208 PHF5AQ7RTV0 110 aaKnown RBP11.23□□□□□ -0.61
GNE-204ENST00000539208 DNAH7Q8WXX0 4024 aa11.22□□□□□ -0.61
GNE-204ENST00000539208 F8WEM9 126 aa11.22□□□□□ -0.61
GNE-204ENST00000539208 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.62
GNE-204ENST00000539208 TMEM258P61165 79 aa11.2□□□□□ -0.62
GNE-204ENST00000539208 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
GNE-204ENST00000539208 LINC00476Q8WZB0 136 aa11.2□□□□□ -0.62
GNE-204ENST00000539208 TENM2Q9NT68 2774 aa11.19□□□□□ -0.62
GNE-204ENST00000539208 HIGD2AQ9BW72 106 aa11.19□□□□□ -0.62
GNE-204ENST00000539208 PLECQ15149 4684 aaKnown RBP11.19□□□□□ -0.62
GNE-204ENST00000539208 Q8N9L7 120 aa11.18□□□□□ -0.62
GNE-204ENST00000539208 C20orf197Q8N268 126 aa11.17□□□□□ -0.62
GNE-204ENST00000539208 EPM2AB3EWF7 344 aa11.16□□□□□ -0.62
GNE-204ENST00000539208 SPRR1BP22528 89 aa11.16□□□□□ -0.62
GNE-204ENST00000539208 IGFL1Q6UW32 110 aa11.16□□□□□ -0.62
GNE-204ENST00000539208 KLKP1Q107X0 134 aa11.13□□□□□ -0.63
GNE-204ENST00000539208 PANO1I0J062 215 aa11.12□□□□□ -0.63
GNE-204ENST00000539208 UBE2AP49459 152 aa11.12□□□□□ -0.63
GNE-204ENST00000539208 A0A087WTM6 91 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms