RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 Q8N377 158 aa4.72□□□□□ -1.65
USP28-203ENST00000537490 H3BS24 57 aa4.71□□□□□ -1.66
USP28-203ENST00000537490 J3QQQ9 107 aa4.71□□□□□ -1.66
USP28-203ENST00000537490 LEPROTL1O95214 131 aa4.71□□□□□ -1.66
USP28-203ENST00000537490 TRGC2P03986 189 aa4.71□□□□□ -1.66
USP28-203ENST00000537490 RPS29P62273 56 aaKnown RBP4.71□□□□□ -1.66
USP28-203ENST00000537490 Q6ZRX8 168 aa4.71□□□□□ -1.66
USP28-203ENST00000537490 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
USP28-203ENST00000537490 SERF1AO75920 110 aa4.7□□□□□ -1.66
USP28-203ENST00000537490 IGLV6-57P01721 117 aa4.7□□□□□ -1.66
USP28-203ENST00000537490 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
USP28-203ENST00000537490 SOSTDC1Q6X4U4 206 aa4.7□□□□□ -1.66
USP28-203ENST00000537490 SPANXB1Q9NS25 103 aaPredicted RBP4.7□□□□□ -1.66
USP28-203ENST00000537490 SLC25A20O43772 301 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 DPM2O94777 84 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 NDUFC2O95298 119 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 FABP4P15090 132 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 PLNP26678 52 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 LINC01547P58512 204 aaPredicted RBP4.69□□□□□ -1.66
USP28-203ENST00000537490 NPC2P61916 151 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 S100A7L2Q5SY68 101 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 ST20-AS1Q8NBB2 130 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 MIEN1Q9BRT3 115 aa4.69□□□□□ -1.66
USP28-203ENST00000537490 TRAV23DV6A0A075B6W5 121 aa4.68□□□□□ -1.66
USP28-203ENST00000537490 IGKCP01834 107 aa4.68□□□□□ -1.66
USP28-203ENST00000537490 LGALS3P17931 250 aaKnown RBP4.68□□□□□ -1.66
USP28-203ENST00000537490 NMUP48645 174 aa4.68□□□□□ -1.66
USP28-203ENST00000537490 HERVK_113P61574 105 aa4.68□□□□□ -1.66
USP28-203ENST00000537490 ADAMTSL4-AS1Q5T5F5 129 aa4.68□□□□□ -1.66
USP28-203ENST00000537490 C9orf153Q5TBE3 101 aa4.68□□□□□ -1.66
USP28-203ENST00000537490 HSPB8Q9UJY1 196 aa4.68□□□□□ -1.66
USP28-203ENST00000537490 A0A0J9YXY3 114 aa4.67□□□□□ -1.66
USP28-203ENST00000537490 ZNF73O43830 326 aaPredicted RBP4.67□□□□□ -1.66
USP28-203ENST00000537490 JOSD1Q15040 202 aaPredicted RBP4.66□□□□□ -1.66
USP28-203ENST00000537490 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
USP28-203ENST00000537490 E9PLD3 99 aa4.65□□□□□ -1.67
USP28-203ENST00000537490 C5orf52A6NGY3 159 aa4.64□□□□□ -1.67
USP28-203ENST00000537490 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
USP28-203ENST00000537490 COLCA2A8K830 154 aa4.63□□□□□ -1.67
USP28-203ENST00000537490 SPRR1BP22528 89 aa4.63□□□□□ -1.67
USP28-203ENST00000537490 HINT1P49773 126 aaPredicted RBP4.63□□□□□ -1.67
USP28-203ENST00000537490 HRCT1Q6UXD1 115 aa4.63□□□□□ -1.67
USP28-203ENST00000537490 OR13C6PQ8NH95 151 aa4.63□□□□□ -1.67
USP28-203ENST00000537490 LINC00308Q8TCZ7 52 aa4.63□□□□□ -1.67
USP28-203ENST00000537490 LITAFQ99732 161 aa4.63□□□□□ -1.67
USP28-203ENST00000537490 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
USP28-203ENST00000537490 ANKRD39Q53RE8 183 aa4.62□□□□□ -1.67
USP28-203ENST00000537490 SYS1-DBNDD2H3BUS1 97 aa4.61□□□□□ -1.67
USP28-203ENST00000537490 PCOTHQ58A44 107 aa4.61□□□□□ -1.67
USP28-203ENST00000537490 SPANXCQ9NY87 97 aa4.61□□□□□ -1.67
USP28-203ENST00000537490 CBY1Q9Y3M2 126 aa4.61□□□□□ -1.67
USP28-203ENST00000537490 C9orf92A6NGG3 77 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 TIMM17BO60830 172 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 SLC25A34Q6PIV7 304 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 SLC7A5P1Q8MH63 180 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 LIMD2Q9BT23 127 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 SPANXDQ9BXN6 97 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 TTTY13Q9BZ97 58 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 DHRS4-AS1Q9P1J3 65 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 LAMTOR3Q9UHA4 124 aa4.6□□□□□ -1.67
USP28-203ENST00000537490 IGLV8-61A0A075B6I0 122 aa4.59□□□□□ -1.67
USP28-203ENST00000537490 COX7BP24311 80 aa4.59□□□□□ -1.67
USP28-203ENST00000537490 ELOF1P60002 83 aaKnown RBP4.59□□□□□ -1.67
USP28-203ENST00000537490 C6orf99Q4VX62 202 aa4.59□□□□□ -1.67
USP28-203ENST00000537490 DEFB105AQ8NG35 78 aa4.59□□□□□ -1.67
USP28-203ENST00000537490 ZNF815PA8K554 130 aa4.58□□□□□ -1.68
USP28-203ENST00000537490 MT1HP80294 61 aa4.58□□□□□ -1.68
USP28-203ENST00000537490 TAL2Q16559 108 aa4.58□□□□□ -1.68
USP28-203ENST00000537490 Q1RN00 199 aa4.58□□□□□ -1.68
USP28-203ENST00000537490 LINC01545Q5VT33 79 aa4.58□□□□□ -1.68
USP28-203ENST00000537490 H7C2G1 150 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BKO60814 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BJP06899 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BOP23527 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BBP33778 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BDP58876 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BCP62807 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST2H2BEQ16778 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.57□□□□□ -1.68
USP28-203ENST00000537490 PET117Q6UWS5 81 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 LINC00518Q8N0U6 118 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BHQ93079 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BNQ99877 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 HIST1H2BMQ99879 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 PRO1933Q9H354 126 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
USP28-203ENST00000537490 A0A0G2JQZ4 141 aa4.56□□□□□ -1.68
USP28-203ENST00000537490 TEX49A0A1B0GTD5 131 aa4.56□□□□□ -1.68
USP28-203ENST00000537490 CD164Q04900 197 aa4.56□□□□□ -1.68
USP28-203ENST00000537490 C3orf79P0CE67 100 aa4.55□□□□□ -1.68
USP28-203ENST00000537490 C1orf195Q5TG92 126 aa4.55□□□□□ -1.68
USP28-203ENST00000537490 TRBV7-6A0A0J9YX20 115 aa4.54□□□□□ -1.68
USP28-203ENST00000537490 AKR1D1P51857 326 aa4.54□□□□□ -1.68
USP28-203ENST00000537490 Q5XG85 94 aa4.54□□□□□ -1.68
USP28-203ENST00000537490 IGLV5-48A0A075B6I7 105 aa4.53□□□□□ -1.68
USP28-203ENST00000537490 A0A1B0GWB2 263 aa4.53□□□□□ -1.68
USP28-203ENST00000537490 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
USP28-203ENST00000537490 A6NDN8 102 aa4.52□□□□□ -1.69
USP28-203ENST00000537490 KRTDAPP60985 99 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms