RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 BRD3OSQ6XYD6 125 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 PRR26Q8N8Z3 221 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 MUC7Q8TAX7 377 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 NOTCH2Q04721 2471 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 ZNF469Q96JG9 3925 aaPredicted RBP2.51□□□□□ -2.01
MCF2-210ENST00000536274 CSPG4Q6UVK1 2322 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 A6NED7 52 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 A6NN06 94 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 UBE2BP63146 152 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 LINC00167Q96N53 147 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 FLNAP21333 2647 aaKnown RBP2.51□□□□□ -2.01
MCF2-210ENST00000536274 ZANQ9Y493 2812 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 K7EQD1 137 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 CXCL6P80162 114 aa2.51□□□□□ -2.01
MCF2-210ENST00000536274 SETD2Q9BYW2 2564 aaPredicted RBP2.5□□□□□ -2.01
MCF2-210ENST00000536274 TRGV2A0A075B6R0 118 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 HIGD2BQ4VC39 106 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 LINC00575Q6W349 94 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 DYNC2H1Q8NCM8 4307 aaKnown RBP2.5□□□□□ -2.01
MCF2-210ENST00000536274 IGLV10-54A0A075B6I4 117 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 TRGV1A0A0A0MS02 117 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 UBE2L6O14933 153 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 DNAH3Q8TD57 4116 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 CMYA5Q8N3K9 4069 aa2.5□□□□□ -2.01
MCF2-210ENST00000536274 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.49□□□□□ -2.01
MCF2-210ENST00000536274 A0A096LPF7 62 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 NDUFA4O00483 81 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 BCE1O60756 84 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 MSMBP08118 114 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 A0A0J9YWU9 116 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 DEFB131AP59861 70 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 MOBPQ13875 183 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 DEFB136Q30KP8 78 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 C5orf56Q8N8D9 126 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 LOC110117498A0A087WWA1 95 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 A0A1W2PNN7 141 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 DEFB105AQ8NG35 78 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 TLN2Q9Y4G6 2542 aa2.49□□□□□ -2.01
MCF2-210ENST00000536274 IGHV4-61A0A0C4DH41 118 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 UBE2AP49459 152 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 SLURP1P55000 103 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 Q8N9P0 234 aaPredicted RBP2.48□□□□□ -2.01
MCF2-210ENST00000536274 TRBV6-8A0A0A6YYG3 113 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 IGHV3OR16-9A0A0B4J2B5 98 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 LINC00313P59037 77 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 TRGV4A0A0C4DH28 118 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 LMO4P61968 165 aa2.48□□□□□ -2.01
MCF2-210ENST00000536274 C7orf65Q6ZTY9 151 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 XAGE1AQ9HD64 81 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 MXRA5Q9NR99 2828 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 SPINK7P58062 85 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 DIRC1Q969H9 104 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 CCDC168Q8NDH2 2452 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 INSP01308 110 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 C18orf65Q6ZTR6 163 aa2.47□□□□□ -2.01
MCF2-210ENST00000536274 FBN1P35555 2871 aaKnown RBP2.46□□□□□ -2.02
MCF2-210ENST00000536274 ERC2-IT1O76042 136 aa2.46□□□□□ -2.02
MCF2-210ENST00000536274 PHF5AQ7RTV0 110 aaKnown RBP2.46□□□□□ -2.02
MCF2-210ENST00000536274 POLQO75417 2590 aa2.46□□□□□ -2.02
MCF2-210ENST00000536274 NDUFS5O43920 106 aa2.46□□□□□ -2.02
MCF2-210ENST00000536274 SPAG11AQ6PDA7 123 aa2.46□□□□□ -2.02
MCF2-210ENST00000536274 ATP11AUNQ6ZP68 121 aa2.46□□□□□ -2.02
MCF2-210ENST00000536274 WFDC13Q8IUB5 93 aa2.46□□□□□ -2.02
MCF2-210ENST00000536274 NOP10Q9NPE3 64 aaKnown RBP2.46□□□□□ -2.02
MCF2-210ENST00000536274 K7EQZ3 153 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 UNQ6190/PRO20217Q6UXQ8 127 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 LINC00208Q96KT6 92 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 TRRAPQ9Y4A5 3859 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 LINC00959A0A1B0GUT2 108 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 C9orf66Q5T8R8 295 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
MCF2-210ENST00000536274 B9D2Q9BPU9 175 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 MTORP42345 2549 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 DNAH1Q9P2D7 4330 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 A6NDX4 124 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 H3BUX3 64 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 WFDC10BQ8IUB3 73 aa2.45□□□□□ -2.02
MCF2-210ENST00000536274 SRRM2Q9UQ35 2752 aaKnown RBP2.45□□□□□ -2.02
MCF2-210ENST00000536274 IGHV4-38-2P0DP08 117 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 Q6YL49 198 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 NKAPP1Q8N9T2 125 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 COX7BP24311 80 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 Q8NAQ8 132 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 MINOS1-NBL1R4GNA1 71 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 RPL37AP61513 92 aaKnown RBP2.44□□□□□ -2.02
MCF2-210ENST00000536274 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
MCF2-210ENST00000536274 LINC01554Q52M75 96 aa2.43□□□□□ -2.02
MCF2-210ENST00000536274 WFDC10AQ9H1F0 79 aa2.43□□□□□ -2.02
MCF2-210ENST00000536274 ETDCA0A1B0GVM5 59 aa2.43□□□□□ -2.02
MCF2-210ENST00000536274 DSCR10P59022 87 aa2.43□□□□□ -2.02
MCF2-210ENST00000536274 KIAA0087Q14695 138 aa2.43□□□□□ -2.02
MCF2-210ENST00000536274 KLK9Q2XQG4 91 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 PCOTHQ58A44 107 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 CYP4F30PQ9H0H9 118 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 ALMS1Q8TCU4 4167 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 LYRM9A8MSI8 78 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms