RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PLNP26678 52 aa7.11□□□□□ -1.27
TNFRSF1A-207ENST00000535958 NMUP48645 174 aa7.11□□□□□ -1.27
TNFRSF1A-207ENST00000535958 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
TNFRSF1A-207ENST00000535958 NDUFA5Q16718 116 aa7.11□□□□□ -1.27
TNFRSF1A-207ENST00000535958 HRCT1Q6UXD1 115 aa7.11□□□□□ -1.27
TNFRSF1A-207ENST00000535958 C5orf52A6NGY3 159 aa7.1□□□□□ -1.27
TNFRSF1A-207ENST00000535958 J3QQQ9 107 aa7.1□□□□□ -1.27
TNFRSF1A-207ENST00000535958 APOC3P02656 99 aa7.1□□□□□ -1.27
TNFRSF1A-207ENST00000535958 NPC2P61916 151 aa7.1□□□□□ -1.27
TNFRSF1A-207ENST00000535958 ST20-AS1Q8NBB2 130 aa7.1□□□□□ -1.27
TNFRSF1A-207ENST00000535958 SNAPINO95295 136 aa7.09□□□□□ -1.27
TNFRSF1A-207ENST00000535958 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
TNFRSF1A-207ENST00000535958 LEPROTL1O95214 131 aa7.08□□□□□ -1.28
TNFRSF1A-207ENST00000535958 MT1HP80294 61 aa7.08□□□□□ -1.28
TNFRSF1A-207ENST00000535958 SVBPQ8N300 66 aa7.08□□□□□ -1.28
TNFRSF1A-207ENST00000535958 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
TNFRSF1A-207ENST00000535958 M0R2T5 61 aa7.07□□□□□ -1.28
TNFRSF1A-207ENST00000535958 DPM2O94777 84 aa7.07□□□□□ -1.28
TNFRSF1A-207ENST00000535958 OR13C6PQ8NH95 151 aa7.06□□□□□ -1.28
TNFRSF1A-207ENST00000535958 DHRS4-AS1Q9P1J3 65 aa7.06□□□□□ -1.28
TNFRSF1A-207ENST00000535958 HSPB8Q9UJY1 196 aa7.05□□□□□ -1.28
TNFRSF1A-207ENST00000535958 IGKCP01834 107 aa7.04□□□□□ -1.28
TNFRSF1A-207ENST00000535958 COX6B2Q6YFQ2 88 aa7.04□□□□□ -1.28
TNFRSF1A-207ENST00000535958 SPRR1BP22528 89 aa7.03□□□□□ -1.28
TNFRSF1A-207ENST00000535958 KRTAP19-2Q3LHN2 52 aa7.03□□□□□ -1.28
TNFRSF1A-207ENST00000535958 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
TNFRSF1A-207ENST00000535958 PMCHL2Q9BQD1 86 aa7.02□□□□□ -1.29
TNFRSF1A-207ENST00000535958 SPANXCQ9NY87 97 aa7.02□□□□□ -1.29
TNFRSF1A-207ENST00000535958 A0A0J9YXY3 114 aa7.01□□□□□ -1.29
TNFRSF1A-207ENST00000535958 H7C2G1 150 aa7.01□□□□□ -1.29
TNFRSF1A-207ENST00000535958 FABP4P15090 132 aa7.01□□□□□ -1.29
TNFRSF1A-207ENST00000535958 TAL2Q16559 108 aa7.01□□□□□ -1.29
TNFRSF1A-207ENST00000535958 PRO1933Q9H354 126 aa7.01□□□□□ -1.29
TNFRSF1A-207ENST00000535958 SERF1AO75920 110 aa7□□□□□ -1.29
TNFRSF1A-207ENST00000535958 CD164Q04900 197 aa7□□□□□ -1.29
TNFRSF1A-207ENST00000535958 Q1RN00 199 aa7□□□□□ -1.29
TNFRSF1A-207ENST00000535958 DEFB105AQ8NG35 78 aa7□□□□□ -1.29
TNFRSF1A-207ENST00000535958 COX7BP24311 80 aa6.99□□□□□ -1.29
TNFRSF1A-207ENST00000535958 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
TNFRSF1A-207ENST00000535958 ADAMTSL4-AS1Q5T5F5 129 aa6.99□□□□□ -1.29
TNFRSF1A-207ENST00000535958 YPEL4Q96NS1 127 aa6.99□□□□□ -1.29
TNFRSF1A-207ENST00000535958 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
TNFRSF1A-207ENST00000535958 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
TNFRSF1A-207ENST00000535958 E9PLD3 99 aa6.97□□□□□ -1.29
TNFRSF1A-207ENST00000535958 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
TNFRSF1A-207ENST00000535958 ELOF1P60002 83 aaKnown RBP6.97□□□□□ -1.29
TNFRSF1A-207ENST00000535958 LINC00308Q8TCZ7 52 aa6.97□□□□□ -1.29
TNFRSF1A-207ENST00000535958 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.3
TNFRSF1A-207ENST00000535958 TRGC2P03986 189 aa6.96□□□□□ -1.3
TNFRSF1A-207ENST00000535958 AKR1D1P51857 326 aa6.96□□□□□ -1.3
TNFRSF1A-207ENST00000535958 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
TNFRSF1A-207ENST00000535958 C6orf99Q4VX62 202 aa6.95□□□□□ -1.3
TNFRSF1A-207ENST00000535958 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
TNFRSF1A-207ENST00000535958 TIMM17BO60830 172 aa6.93□□□□□ -1.3
TNFRSF1A-207ENST00000535958 LINC00310P59036 64 aa6.93□□□□□ -1.3
TNFRSF1A-207ENST00000535958 Q5XG85 94 aa6.93□□□□□ -1.3
TNFRSF1A-207ENST00000535958 TCL1BO95988 128 aa6.92□□□□□ -1.3
TNFRSF1A-207ENST00000535958 C1orf195Q5TG92 126 aa6.92□□□□□ -1.3
TNFRSF1A-207ENST00000535958 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
TNFRSF1A-207ENST00000535958 SMIM29Q86T20 159 aa6.9□□□□□ -1.3
TNFRSF1A-207ENST00000535958 LITAFQ99732 161 aa6.9□□□□□ -1.3
TNFRSF1A-207ENST00000535958 TRBV7-6A0A0J9YX20 115 aa6.89□□□□□ -1.31
TNFRSF1A-207ENST00000535958 A0A1B0GWB2 263 aa6.89□□□□□ -1.31
TNFRSF1A-207ENST00000535958 COPS9Q8WXC6 57 aa6.89□□□□□ -1.31
TNFRSF1A-207ENST00000535958 Q6Q795 121 aa6.88□□□□□ -1.31
TNFRSF1A-207ENST00000535958 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
TNFRSF1A-207ENST00000535958 NHP2Q9NX24 153 aaKnown RBP6.88□□□□□ -1.31
TNFRSF1A-207ENST00000535958 A6NDN8 102 aa6.87□□□□□ -1.31
TNFRSF1A-207ENST00000535958 F8WEM9 126 aa6.87□□□□□ -1.31
TNFRSF1A-207ENST00000535958 SYS1-DBNDD2H3BUS1 97 aa6.87□□□□□ -1.31
TNFRSF1A-207ENST00000535958 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
TNFRSF1A-207ENST00000535958 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
TNFRSF1A-207ENST00000535958 A0A0G2JQZ4 141 aa6.85□□□□□ -1.31
TNFRSF1A-207ENST00000535958 A4D1N5 150 aa6.85□□□□□ -1.31
TNFRSF1A-207ENST00000535958 PCP2Q8IVA1 136 aa6.84□□□□□ -1.31
TNFRSF1A-207ENST00000535958 ATP11AUNQ6ZP68 121 aa6.83□□□□□ -1.32
TNFRSF1A-207ENST00000535958 TTTY13Q9BZ97 58 aa6.83□□□□□ -1.32
TNFRSF1A-207ENST00000535958 PET117Q6UWS5 81 aa6.82□□□□□ -1.32
TNFRSF1A-207ENST00000535958 IFITM1P13164 125 aa6.81□□□□□ -1.32
TNFRSF1A-207ENST00000535958 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
TNFRSF1A-207ENST00000535958 TRAV13-2A0A0B4J235 113 aa6.79□□□□□ -1.32
TNFRSF1A-207ENST00000535958 Q6ZVH6 145 aa6.79□□□□□ -1.32
TNFRSF1A-207ENST00000535958 VAMP3Q15836 100 aa6.78□□□□□ -1.32
TNFRSF1A-207ENST00000535958 Q6JHZ5 121 aa6.78□□□□□ -1.32
TNFRSF1A-207ENST00000535958 SLC7A5P1Q8MH63 180 aa6.78□□□□□ -1.32
TNFRSF1A-207ENST00000535958 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
TNFRSF1A-207ENST00000535958 COLCA2A8K830 154 aa6.77□□□□□ -1.33
TNFRSF1A-207ENST00000535958 CFC1P0CG37 223 aa6.77□□□□□ -1.33
TNFRSF1A-207ENST00000535958 CLEC2BQ92478 149 aa6.77□□□□□ -1.33
TNFRSF1A-207ENST00000535958 C20orf202A1L168 122 aa6.76□□□□□ -1.33
TNFRSF1A-207ENST00000535958 Q75L30 129 aa6.76□□□□□ -1.33
TNFRSF1A-207ENST00000535958 TRBV7-7A0A0K0K1E9 115 aa6.75□□□□□ -1.33
TNFRSF1A-207ENST00000535958 KRTDAPP60985 99 aa6.75□□□□□ -1.33
TNFRSF1A-207ENST00000535958 MUSTN1Q8IVN3 82 aa6.75□□□□□ -1.33
TNFRSF1A-207ENST00000535958 SMIM11BQ8TCY0 68 aa6.75□□□□□ -1.33
TNFRSF1A-207ENST00000535958 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
TNFRSF1A-207ENST00000535958 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
TNFRSF1A-207ENST00000535958 TRBV20-1A0A075B6N2 111 aa6.73□□□□□ -1.33
TNFRSF1A-207ENST00000535958 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
TNFRSF1A-207ENST00000535958 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms