RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 WNK1Q9H4A3 2382 aa2□□□□□ -2.09
CSDE1-216ENST00000534389 AKAP6Q13023 2319 aa1.99□□□□□ -2.09
CSDE1-216ENST00000534389 CNBPP62633 177 aaKnown RBP1.99□□□□□ -2.09
CSDE1-216ENST00000534389 DEFB112Q30KQ8 113 aa1.99□□□□□ -2.09
CSDE1-216ENST00000534389 LINC01554Q52M75 96 aa1.99□□□□□ -2.09
CSDE1-216ENST00000534389 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
CSDE1-216ENST00000534389 Q8NAQ8 132 aa1.99□□□□□ -2.09
CSDE1-216ENST00000534389 PRO3102Q9H379 93 aa1.99□□□□□ -2.09
CSDE1-216ENST00000534389 ZDBF2Q9HCK1 2354 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 IGLV10-54A0A075B6I4 117 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 IGLV5-48A0A075B6I7 105 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 IGKV2D-24A0A075B6R9 120 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 A0A0G2JQZ4 141 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 A0A1W2PNN7 141 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 NKAPP1Q8N9T2 125 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 CHCHD10Q8WYQ3 142 aaPredicted RBP1.98□□□□□ -2.09
CSDE1-216ENST00000534389 XAGE1AQ9HD64 81 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 MAP1BP46821 2468 aaKnown RBP1.98□□□□□ -2.09
CSDE1-216ENST00000534389 ABCA2Q9BZC7 2435 aa1.98□□□□□ -2.09
CSDE1-216ENST00000534389 TNRC18O15417 2968 aaPredicted RBP1.98□□□□□ -2.09
CSDE1-216ENST00000534389 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 WDFY3Q8IZQ1 3526 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 IGLV1-50A0A075B6I6 118 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 FAM168BA1KXE4 195 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 H0Y9P7 68 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 SPAG11BQ08648 103 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 DEFB136Q30KP8 78 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 FBXL19-AS1Q494R0 122 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 WFDC13Q8IUB5 93 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 DEFB105AQ8NG35 78 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 C7orf33Q8WU49 177 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 WFDC10AQ9H1F0 79 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 C6orf48Q9UBA6 75 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 CUL9Q8IWT3 2517 aa1.97□□□□□ -2.09
CSDE1-216ENST00000534389 DMXL2Q8TDJ6 3036 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 CELSR3Q9NYQ7 3312 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 IGLV8-61A0A075B6I0 122 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 GVQW2A0A096LPI5 108 aaPredicted RBP1.96□□□□□ -2.1
CSDE1-216ENST00000534389 RTL8CO15255 209 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 NDUFB1O75438 58 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 SPAG11AQ6PDA7 123 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 SPRR4Q96PI1 79 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 ZNF702PQ9H963 129 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.96□□□□□ -2.12e-6■■■■□ 24
CSDE1-216ENST00000534389 NOTCH3Q9UM47 2321 aa1.96□□□□□ -2.1
CSDE1-216ENST00000534389 SPTBN5Q9NRC6 3674 aaKnown RBP1.96□□□□□ -2.1
CSDE1-216ENST00000534389 CSMD1Q96PZ7 3565 aa1.95□□□□□ -2.1
CSDE1-216ENST00000534389 EP300Q09472 2414 aaPredicted RBP1.95□□□□□ -2.1
CSDE1-216ENST00000534389 DCHS1Q96JQ0 3298 aa1.95□□□□□ -2.1
CSDE1-216ENST00000534389 A0A096LPF7 62 aa1.95□□□□□ -2.1
CSDE1-216ENST00000534389 HRES1P13985 223 aa1.95□□□□□ -2.1
CSDE1-216ENST00000534389 RPL37AP61513 92 aaKnown RBP1.95□□□□□ -2.1
CSDE1-216ENST00000534389 DEFB124Q8NES8 71 aa1.95□□□□□ -2.1
CSDE1-216ENST00000534389 DMDP11532 3685 aa1.95□□□□□ -2.1
CSDE1-216ENST00000534389 PRRC2CQ9Y520 2896 aaKnown RBP1.94□□□□□ -2.1
CSDE1-216ENST00000534389 SPTA1P02549 2419 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 A0A1B0GW54 56 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 KRTAP4-16G5E9R7 235 aaPredicted RBP1.94□□□□□ -2.1
CSDE1-216ENST00000534389 H3BPC8 53 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 IGLV1-51P01701 117 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 MP68P56378 58 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 KRTAP10-12P60413 245 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 REG3AQ06141 175 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 C1orf137Q5JT78 98 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 KRTAP26-1Q6PEX3 210 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 CASC2Q6XLA1 102 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 WFDC10BQ8IUB3 73 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 PRR34Q9NV39 138 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 TACC2O95359 2948 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 SPTAN1Q13813 2472 aaKnown RBP1.94□□□□□ -2.1
CSDE1-216ENST00000534389 DCHS2Q6V1P9 2916 aa1.94□□□□□ -2.1
CSDE1-216ENST00000534389 SMG1Q96Q15 3661 aaKnown RBP1.93□□□□□ -2.1
CSDE1-216ENST00000534389 ANGP03950 147 aaKnown RBP1.93□□□□□ -2.1
CSDE1-216ENST00000534389 ASB16-AS1Q495Z4 193 aa1.93□□□□□ -2.1
CSDE1-216ENST00000534389 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
CSDE1-216ENST00000534389 C16orf74Q96GX8 76 aa1.93□□□□□ -2.1
CSDE1-216ENST00000534389 MYO15AQ9UKN7 3530 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 PIEZO2Q9H5I5 2752 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 H0Y9J4 135 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 DEFB130BP0DP73 79 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 DEFB130AP0DP74 79 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 KRTAP10-5P60370 271 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 PCOTHQ58A44 107 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 IGFL1Q6UW32 110 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 ANKHD1Q8IWZ3 2542 aaKnown RBP1.92□□□□□ -2.1
CSDE1-216ENST00000534389 ALMS1Q8TCU4 4167 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 TRIOBPQ9H2D6 2365 aa1.92□□□□□ -2.1
CSDE1-216ENST00000534389 CREBBPQ92793 2442 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 MMP24-AS1A0A0U1RRL7 71 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 DNAH10OSP0CZ25 163 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 SPRR1AP35321 89 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 EGFEM1PQ0D2K5 195 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 C4orf3Q8WVX3 66 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 AKAP13Q12802 2813 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 HRNRQ86YZ3 2850 aaPredicted RBP1.91□□□□□ -2.1
CSDE1-216ENST00000534389 ATRXP46100 2492 aa1.91□□□□□ -2.1
CSDE1-216ENST00000534389 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
CSDE1-216ENST00000534389 MSMBP08118 114 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms