RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 LINC01556Q5JQF7 62 aa10.88□□□□□ -0.67
CTSB-228ENST00000533455 BPY2O14599 106 aa10.87□□□□□ -0.67
CTSB-228ENST00000533455 SYCNQ0VAF6 134 aa10.87□□□□□ -0.67
CTSB-228ENST00000533455 Q6ZTC4 211 aa10.87□□□□□ -0.67
CTSB-228ENST00000533455 HRCT1Q6UXD1 115 aa10.86□□□□□ -0.67
CTSB-228ENST00000533455 RETNQ9HD89 108 aa10.86□□□□□ -0.67
CTSB-228ENST00000533455 ATP5EP56381 51 aaPredicted RBP10.85□□□□□ -0.67
CTSB-228ENST00000533455 IGLV5-48A0A075B6I7 105 aa10.85□□□□□ -0.67
CTSB-228ENST00000533455 NKAPP1Q8N9T2 125 aa10.84□□□□□ -0.67
CTSB-228ENST00000533455 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
CTSB-228ENST00000533455 IGKV2D-24A0A075B6R9 120 aa10.84□□□□□ -0.67
CTSB-228ENST00000533455 Q8N377 158 aa10.84□□□□□ -0.67
CTSB-228ENST00000533455 TENM1Q9UKZ4 2725 aa10.84□□□□□ -0.67
CTSB-228ENST00000533455 F8P00451 2351 aa10.83□□□□□ -0.68
CTSB-228ENST00000533455 SERTAD4-AS1Q5TG53 156 aa10.83□□□□□ -0.68
CTSB-228ENST00000533455 TMEM254Q8TBM7 123 aa10.83□□□□□ -0.68
CTSB-228ENST00000533455 PLA2G2DQ9UNK4 145 aa10.83□□□□□ -0.68
CTSB-228ENST00000533455 TLX1NBP0CAT3 122 aa10.82□□□□□ -0.68
CTSB-228ENST00000533455 Q8N9L7 120 aa10.82□□□□□ -0.68
CTSB-228ENST00000533455 A0A1B0GW54 56 aa10.82□□□□□ -0.68
CTSB-228ENST00000533455 OCR1Q9BZK8 76 aa10.82□□□□□ -0.68
CTSB-228ENST00000533455 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
CTSB-228ENST00000533455 C3orf84H3BNL1 204 aa10.79□□□□□ -0.68
CTSB-228ENST00000533455 IGLV5-37A0A075B6J1 123 aa10.79□□□□□ -0.68
CTSB-228ENST00000533455 SMIM26A0A096LP01 95 aa10.79□□□□□ -0.68
CTSB-228ENST00000533455 KRTAP4-16G5E9R7 235 aaPredicted RBP10.78□□□□□ -0.68
CTSB-228ENST00000533455 PRYO14603 147 aa10.78□□□□□ -0.68
CTSB-228ENST00000533455 Q6ZRX8 168 aa10.78□□□□□ -0.68
CTSB-228ENST00000533455 DEFB105AQ8NG35 78 aa10.78□□□□□ -0.68
CTSB-228ENST00000533455 BAHCC1Q9P281 2608 aa10.77□□□□□ -0.68
CTSB-228ENST00000533455 A0A0U1RQV1 116 aa10.77□□□□□ -0.68
CTSB-228ENST00000533455 TEP1Q99973 2627 aaKnown RBP10.77□□□□□ -0.69
CTSB-228ENST00000533455 DNAH10OSP0CZ25 163 aa10.77□□□□□ -0.69
CTSB-228ENST00000533455 KRTAP10-11P60412 298 aa10.77□□□□□ -0.69
CTSB-228ENST00000533455 TNP2Q05952 138 aa10.77□□□□□ -0.69
CTSB-228ENST00000533455 SPRR1AP35321 89 aa10.76□□□□□ -0.69
CTSB-228ENST00000533455 ATRQ13535 2644 aa10.76□□□□□ -0.69
CTSB-228ENST00000533455 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
CTSB-228ENST00000533455 FUSP35637 526 aaKnown RBP eCLIP10.75□□□□□ -0.69
CTSB-228ENST00000533455 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
CTSB-228ENST00000533455 Q9BRP9 147 aa10.75□□□□□ -0.69
CTSB-228ENST00000533455 IGLV1-50A0A075B6I6 118 aa10.74□□□□□ -0.69
CTSB-228ENST00000533455 A0A1W2PNM2 257 aa10.74□□□□□ -0.69
CTSB-228ENST00000533455 OXLD1Q5BKU9 147 aa10.74□□□□□ -0.69
CTSB-228ENST00000533455 FP248Q71RG6 208 aaPredicted RBP10.74□□□□□ -0.69
CTSB-228ENST00000533455 ETDCA0A1B0GVM5 59 aa10.72□□□□□ -0.69
CTSB-228ENST00000533455 Q8NBF4 154 aa10.72□□□□□ -0.69
CTSB-228ENST00000533455 MRAPQ8TCY5 172 aa10.72□□□□□ -0.69
CTSB-228ENST00000533455 C1orf137Q5JT78 98 aa10.71□□□□□ -0.69
CTSB-228ENST00000533455 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
CTSB-228ENST00000533455 RPL37AP8A6NKH3 93 aa10.7□□□□□ -0.7
CTSB-228ENST00000533455 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
CTSB-228ENST00000533455 FAM168BA1KXE4 195 aa10.69□□□□□ -0.7
CTSB-228ENST00000533455 KRTAP7-1Q8IUC3 87 aa10.68□□□□□ -0.7
CTSB-228ENST00000533455 LCE6AA0A183 80 aa10.68□□□□□ -0.7
CTSB-228ENST00000533455 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
CTSB-228ENST00000533455 SMIM29Q86T20 159 aa10.67□□□□□ -0.7
CTSB-228ENST00000533455 HIGD2AQ9BW72 106 aa10.65□□□□□ -0.7
CTSB-228ENST00000533455 FBN1P35555 2871 aaKnown RBP10.65□□□□□ -0.7
CTSB-228ENST00000533455 CASC10Q5T4H9 136 aa10.65□□□□□ -0.71
CTSB-228ENST00000533455 LINC00474Q9P2X8 69 aa10.64□□□□□ -0.71
CTSB-228ENST00000533455 DNAH1Q9P2D7 4330 aa10.64□□□□□ -0.71
CTSB-228ENST00000533455 MRPL55Q7Z7F7 128 aaKnown RBP10.63□□□□□ -0.71
CTSB-228ENST00000533455 DSCR10P59022 87 aa10.63□□□□□ -0.71
CTSB-228ENST00000533455 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
CTSB-228ENST00000533455 LINC00588Q9Y4M8 146 aa10.63□□□□□ -0.71
CTSB-228ENST00000533455 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
CTSB-228ENST00000533455 FAM30AQ9NZY2 134 aa10.62□□□□□ -0.71
CTSB-228ENST00000533455 PRO0628Q9UI54 55 aa10.61□□□□□ -0.71
CTSB-228ENST00000533455 TENM3Q9P273 2699 aa10.6□□□□□ -0.71
CTSB-228ENST00000533455 UBE2BP63146 152 aa10.6□□□□□ -0.71
CTSB-228ENST00000533455 FAM229BQ4G0N7 80 aa10.59□□□□□ -0.71
CTSB-228ENST00000533455 CMYA5Q8N3K9 4069 aa10.58□□□□□ -0.71
CTSB-228ENST00000533455 REG3GQ6UW15 175 aa10.58□□□□□ -0.72
CTSB-228ENST00000533455 K7EQZ3 153 aa10.57□□□□□ -0.72
CTSB-228ENST00000533455 ZCCHC13Q8WW36 166 aaKnown RBP10.57□□□□□ -0.72
CTSB-228ENST00000533455 DNAH3Q8TD57 4116 aa10.57□□□□□ -0.72
CTSB-228ENST00000533455 MAST4O15021 2626 aa10.56□□□□□ -0.72
CTSB-228ENST00000533455 STAB1Q9NY15 2570 aa10.56□□□□□ -0.72
CTSB-228ENST00000533455 KRTAP24-1Q3LI83 254 aa10.56□□□□□ -0.72
CTSB-228ENST00000533455 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
CTSB-228ENST00000533455 ANK2Q01484 3957 aa10.55□□□□□ -0.72
CTSB-228ENST00000533455 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
CTSB-228ENST00000533455 IGLV8-61A0A075B6I0 122 aa10.51□□□□□ -0.73
CTSB-228ENST00000533455 IGFL1Q6UW32 110 aa10.51□□□□□ -0.73
CTSB-228ENST00000533455 hDV103S1A0JD37 113 aa10.5□□□□□ -0.73
CTSB-228ENST00000533455 PSCAO43653 123 aa10.5□□□□□ -0.73
CTSB-228ENST00000533455 COL6A5A8TX70 2615 aa10.48□□□□□ -0.73
CTSB-228ENST00000533455 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.48□□□□□ -0.73
CTSB-228ENST00000533455 MPLKIPQ8TAP9 179 aa10.48□□□□□ -0.73
CTSB-228ENST00000533455 A0A096LNI7 61 aa10.45□□□□□ -0.74
CTSB-228ENST00000533455 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
CTSB-228ENST00000533455 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
CTSB-228ENST00000533455 A0A1W2PNN7 141 aa10.45□□□□□ -0.74
CTSB-228ENST00000533455 PRLHP81277 87 aa10.44□□□□□ -0.74
CTSB-228ENST00000533455 CYP4F30PQ9H0H9 118 aa10.44□□□□□ -0.74
CTSB-228ENST00000533455 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
CTSB-228ENST00000533455 C1orf64Q8NEQ6 169 aa10.43□□□□□ -0.74
CTSB-228ENST00000533455 A0A087WSZ3 146 aa10.42□□□□□ -0.74
CTSB-228ENST00000533455 BRK1Q8WUW1 75 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms