RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 UBE2AP49459 152 aa13.39□□□□□ -0.27
PKP3-210ENST00000533249 NKAPP1Q8N9T2 125 aa13.39□□□□□ -0.27
PKP3-210ENST00000533249 LINC00308Q8TCZ7 52 aa13.38□□□□□ -0.27
PKP3-210ENST00000533249 IGLV5-37A0A075B6J1 123 aa13.37□□□□□ -0.27
PKP3-210ENST00000533249 MUSTN1Q8IVN3 82 aa13.37□□□□□ -0.27
PKP3-210ENST00000533249 RPL24P83731 157 aaKnown RBP13.36□□□□□ -0.27
PKP3-210ENST00000533249 KRTAP13-2Q52LG2 175 aa13.36□□□□□ -0.27
PKP3-210ENST00000533249 KRTAP13-1Q8IUC0 172 aa13.36□□□□□ -0.27
PKP3-210ENST00000533249 TAL2Q16559 108 aa13.35□□□□□ -0.27
PKP3-210ENST00000533249 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
PKP3-210ENST00000533249 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
PKP3-210ENST00000533249 HSD52Q0P140 79 aa13.34□□□□□ -0.27
PKP3-210ENST00000533249 RETNLBQ9BQ08 111 aa13.34□□□□□ -0.27
PKP3-210ENST00000533249 SOSTDC1Q6X4U4 206 aa13.32□□□□□ -0.28
PKP3-210ENST00000533249 LOC107984156A0A0G2JMH3 177 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 DDTP30046 118 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 CTAG1AP78358 180 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 PRLHP81277 87 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 FAM229BQ4G0N7 80 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 ARL17AQ8IVW1 177 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 CEND1Q8N111 149 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 LINC00304Q8N9R0 145 aa13.3□□□□□ -0.28
PKP3-210ENST00000533249 TMEM238LA0A1B0GVL6 79 aa13.28□□□□□ -0.28
PKP3-210ENST00000533249 A6NJY4 79 aa13.28□□□□□ -0.28
PKP3-210ENST00000533249 EIF4EBP3O60516 100 aaPredicted RBP13.28□□□□□ -0.28
PKP3-210ENST00000533249 PPDPFQ9H3Y8 114 aa13.28□□□□□ -0.28
PKP3-210ENST00000533249 PCP4L1A6NKN8 68 aa13.27□□□□□ -0.29
PKP3-210ENST00000533249 NDUFC2O95298 119 aa13.27□□□□□ -0.29
PKP3-210ENST00000533249 A4D1N5 150 aa13.26□□□□□ -0.29
PKP3-210ENST00000533249 NCR3O14931 201 aa13.26□□□□□ -0.29
PKP3-210ENST00000533249 FAM19A1Q7Z5A9 133 aa13.26□□□□□ -0.29
PKP3-210ENST00000533249 M0R143 59 aa13.25□□□□□ -0.29
PKP3-210ENST00000533249 VPREB1P12018 145 aa13.25□□□□□ -0.29
PKP3-210ENST00000533249 TMEM126AQ9H061 195 aa13.24□□□□□ -0.29
PKP3-210ENST00000533249 M0R378 163 aa13.23□□□□□ -0.29
PKP3-210ENST00000533249 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
PKP3-210ENST00000533249 OR13C6PQ8NH95 151 aa13.23□□□□□ -0.29
PKP3-210ENST00000533249 HINT1P49773 126 aaPredicted RBP13.22□□□□□ -0.29
PKP3-210ENST00000533249 CDIP1Q9H305 208 aa13.22□□□□□ -0.29
PKP3-210ENST00000533249 TRBV10-2A0A0K0K1G8 114 aa13.21□□□□□ -0.29
PKP3-210ENST00000533249 Q8NDZ9 215 aa13.21□□□□□ -0.29
PKP3-210ENST00000533249 RAB37Q96AX2 223 aa13.21□□□□□ -0.29
PKP3-210ENST00000533249 KRTAP9-2Q9BYQ4 174 aa13.21□□□□□ -0.29
PKP3-210ENST00000533249 FAT4Q6V0I7 4981 aa13.2□□□□□ -0.3
PKP3-210ENST00000533249 FXYD2P54710 66 aa13.2□□□□□ -0.3
PKP3-210ENST00000533249 IGLV7-46A0A075B6I9 117 aa13.19□□□□□ -0.3
PKP3-210ENST00000533249 A6NDN8 102 aa13.19□□□□□ -0.3
PKP3-210ENST00000533249 BVES-AS1Q5T3Y7 98 aa13.19□□□□□ -0.3
PKP3-210ENST00000533249 TRAV13-2A0A0B4J235 113 aa13.18□□□□□ -0.3
PKP3-210ENST00000533249 BATFQ16520 125 aa13.18□□□□□ -0.3
PKP3-210ENST00000533249 TPRXLQ17RH7 258 aa13.18□□□□□ -0.3
PKP3-210ENST00000533249 LCE2AQ5TA79 106 aaPredicted RBP13.18□□□□□ -0.3
PKP3-210ENST00000533249 C3orf22Q8N5N4 141 aa13.17□□□□□ -0.3
PKP3-210ENST00000533249 NHP2Q9NX24 153 aaKnown RBP13.17□□□□□ -0.3
PKP3-210ENST00000533249 HIGD2AQ9BW72 106 aa13.15□□□□□ -0.3
PKP3-210ENST00000533249 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
PKP3-210ENST00000533249 CFC1P0CG37 223 aa13.14□□□□□ -0.31
PKP3-210ENST00000533249 CBY1Q9Y3M2 126 aa13.14□□□□□ -0.31
PKP3-210ENST00000533249 LINC00337Q8N6G1 96 aa13.13□□□□□ -0.31
PKP3-210ENST00000533249 A0A0B4J2C4 111 aa13.12□□□□□ -0.31
PKP3-210ENST00000533249 TRBV10-3A0A0K0K1G6 114 aa13.12□□□□□ -0.31
PKP3-210ENST00000533249 MUC17Q685J3 4493 aa13.11□□□□□ -0.31
PKP3-210ENST00000533249 H7C2G1 150 aa13.1□□□□□ -0.31
PKP3-210ENST00000533249 PRO1854Q9UHT4 67 aa13.1□□□□□ -0.31
PKP3-210ENST00000533249 Q1RN00 199 aa13.09□□□□□ -0.31
PKP3-210ENST00000533249 IGLV6-57P01721 117 aa13.08□□□□□ -0.32
PKP3-210ENST00000533249 K7ERJ3 54 aa13.07□□□□□ -0.32
PKP3-210ENST00000533249 SPRR4Q96PI1 79 aa13.07□□□□□ -0.32
PKP3-210ENST00000533249 TRAV23DV6A0A075B6W5 121 aa13.06□□□□□ -0.32
PKP3-210ENST00000533249 SPAG11AQ6PDA7 123 aa13.06□□□□□ -0.32
PKP3-210ENST00000533249 PRYO14603 147 aa13.05□□□□□ -0.32
PKP3-210ENST00000533249 A0A1B0GWB2 263 aa13.04□□□□□ -0.32
PKP3-210ENST00000533249 KCNQ1DNQ9H478 68 aa13.03□□□□□ -0.32
PKP3-210ENST00000533249 C4orf48Q5BLP8 95 aa13.02□□□□□ -0.33
PKP3-210ENST00000533249 ZNF706Q9Y5V0 76 aaPredicted RBP13.02□□□□□ -0.33
PKP3-210ENST00000533249 SMIM11BQ8TCY0 68 aa13.01□□□□□ -0.33
PKP3-210ENST00000533249 SNHG12Q9BXW3 62 aa13.01□□□□□ -0.33
PKP3-210ENST00000533249 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
PKP3-210ENST00000533249 ZNF73O43830 326 aaPredicted RBP13□□□□□ -0.33
PKP3-210ENST00000533249 PSMB2P49721 201 aa13□□□□□ -0.33
PKP3-210ENST00000533249 VAMP3Q15836 100 aa12.99□□□□□ -0.33
PKP3-210ENST00000533249 FP248Q71RG6 208 aaPredicted RBP12.98□□□□□ -0.33
PKP3-210ENST00000533249 Q8NBF4 154 aa12.98□□□□□ -0.33
PKP3-210ENST00000533249 C6orf99Q4VX62 202 aa12.97□□□□□ -0.33
PKP3-210ENST00000533249 COL5A1-AS1Q5SY13 56 aa12.96□□□□□ -0.33
PKP3-210ENST00000533249 SMCR5Q8TEV8 140 aa12.96□□□□□ -0.33
PKP3-210ENST00000533249 COX6CP09669 75 aa12.93□□□□□ -0.34
PKP3-210ENST00000533249 COX7BP24311 80 aa12.93□□□□□ -0.34
PKP3-210ENST00000533249 SPRR1AP35321 89 aa12.93□□□□□ -0.34
PKP3-210ENST00000533249 SCGB1C2P0DMR2 95 aa12.92□□□□□ -0.34
PKP3-210ENST00000533249 KRTAP13-3Q3SY46 172 aa12.92□□□□□ -0.34
PKP3-210ENST00000533249 TRBV7-6A0A0J9YX20 115 aa12.9□□□□□ -0.34
PKP3-210ENST00000533249 KRTAP4-16G5E9R7 235 aaPredicted RBP12.89□□□□□ -0.35
PKP3-210ENST00000533249 KRTAP9-6A0A140TA67 174 aa12.88□□□□□ -0.35
PKP3-210ENST00000533249 B5MCH6 92 aa12.88□□□□□ -0.35
PKP3-210ENST00000533249 TRIAP1O43715 76 aa12.88□□□□□ -0.35
PKP3-210ENST00000533249 SPINK1P00995 79 aa12.88□□□□□ -0.35
PKP3-210ENST00000533249 NAA38Q9BRA0 125 aaKnown RBP12.88□□□□□ -0.35
PKP3-210ENST00000533249 H0YGX0 51 aa12.87□□□□□ -0.35
PKP3-210ENST00000533249 TAX1BP3O14907 124 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms