RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
PCF11-206ENST00000533018 SLC25A20O43772 301 aa9.99□□□□□ -0.81
PCF11-206ENST00000533018 HINT1P49773 126 aaPredicted RBP9.99□□□□□ -0.81
PCF11-206ENST00000533018 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
PCF11-206ENST00000533018 SOSTDC1Q6X4U4 206 aa9.99□□□□□ -0.81
PCF11-206ENST00000533018 Q8N377 158 aa9.99□□□□□ -0.81
PCF11-206ENST00000533018 ASB16-AS1Q495Z4 193 aa9.98□□□□□ -0.81
PCF11-206ENST00000533018 EIF4EBP3O60516 100 aaPredicted RBP9.97□□□□□ -0.81
PCF11-206ENST00000533018 SEC61BP60468 96 aaKnown RBP9.97□□□□□ -0.81
PCF11-206ENST00000533018 ST20-AS1Q8NBB2 130 aa9.97□□□□□ -0.81
PCF11-206ENST00000533018 E9PLD3 99 aa9.96□□□□□ -0.82
PCF11-206ENST00000533018 OR13C6PQ8NH95 151 aa9.96□□□□□ -0.82
PCF11-206ENST00000533018 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
PCF11-206ENST00000533018 COLCA2A8K830 154 aa9.95□□□□□ -0.82
PCF11-206ENST00000533018 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
PCF11-206ENST00000533018 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
PCF11-206ENST00000533018 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
PCF11-206ENST00000533018 SPANXCQ9NY87 97 aa9.92□□□□□ -0.82
PCF11-206ENST00000533018 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
PCF11-206ENST00000533018 LINC01547P58512 204 aaPredicted RBP9.91□□□□□ -0.82
PCF11-206ENST00000533018 C5orf52A6NGY3 159 aa9.89□□□□□ -0.83
PCF11-206ENST00000533018 HRCT1Q6UXD1 115 aa9.89□□□□□ -0.83
PCF11-206ENST00000533018 SLC25A34Q6PIV7 304 aa9.88□□□□□ -0.83
PCF11-206ENST00000533018 LITAFQ99732 161 aa9.88□□□□□ -0.83
PCF11-206ENST00000533018 KRTAP4-1Q9BYQ7 146 aa9.88□□□□□ -0.83
PCF11-206ENST00000533018 DHRS4-AS1Q9P1J3 65 aa9.88□□□□□ -0.83
PCF11-206ENST00000533018 ZNF815PA8K554 130 aa9.87□□□□□ -0.83
PCF11-206ENST00000533018 TIMM17BO60830 172 aa9.87□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BKO60814 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BJP06899 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BOP23527 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BBP33778 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BDP58876 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BCP62807 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST2H2BEQ16778 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.85□□□□□ -0.83
PCF11-206ENST00000533018 XP32Q5T750 250 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BHQ93079 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BNQ99877 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 HIST1H2BMQ99879 126 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 SPANXDQ9BXN6 97 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 LAMTOR3Q9UHA4 124 aa9.85□□□□□ -0.83
PCF11-206ENST00000533018 LINC01545Q5VT33 79 aa9.84□□□□□ -0.83
PCF11-206ENST00000533018 PET117Q6UWS5 81 aa9.84□□□□□ -0.83
PCF11-206ENST00000533018 LIMD2Q9BT23 127 aa9.84□□□□□ -0.83
PCF11-206ENST00000533018 TTTY13Q9BZ97 58 aa9.84□□□□□ -0.83
PCF11-206ENST00000533018 SPRR1BP22528 89 aa9.83□□□□□ -0.84
PCF11-206ENST00000533018 COX7BP24311 80 aa9.83□□□□□ -0.84
PCF11-206ENST00000533018 LINC00518Q8N0U6 118 aa9.83□□□□□ -0.84
PCF11-206ENST00000533018 DEFB105AQ8NG35 78 aa9.83□□□□□ -0.84
PCF11-206ENST00000533018 TAL2Q16559 108 aa9.82□□□□□ -0.84
PCF11-206ENST00000533018 C6orf99Q4VX62 202 aa9.82□□□□□ -0.84
PCF11-206ENST00000533018 ELOF1P60002 83 aaKnown RBP9.8□□□□□ -0.84
PCF11-206ENST00000533018 Q1RN00 199 aa9.8□□□□□ -0.84
PCF11-206ENST00000533018 SCGB1D4Q6XE38 83 aa9.79□□□□□ -0.84
PCF11-206ENST00000533018 KRTAP9-6A0A140TA67 174 aa9.78□□□□□ -0.84
PCF11-206ENST00000533018 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
PCF11-206ENST00000533018 C3orf79P0CE67 100 aa9.78□□□□□ -0.84
PCF11-206ENST00000533018 KRTDAPP60985 99 aa9.78□□□□□ -0.84
PCF11-206ENST00000533018 FSIP2Q5CZC0 6907 aa9.76□□□□□ -0.85
PCF11-206ENST00000533018 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
PCF11-206ENST00000533018 PRO1933Q9H354 126 aa9.76□□□□□ -0.85
PCF11-206ENST00000533018 A6NDN8 102 aa9.75□□□□□ -0.85
PCF11-206ENST00000533018 H7C2G1 150 aa9.75□□□□□ -0.85
PCF11-206ENST00000533018 COPS9Q8WXC6 57 aa9.75□□□□□ -0.85
PCF11-206ENST00000533018 PCOTHQ58A44 107 aa9.73□□□□□ -0.85
PCF11-206ENST00000533018 C20orf202A1L168 122 aa9.72□□□□□ -0.85
PCF11-206ENST00000533018 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
PCF11-206ENST00000533018 TRBV7-6A0A0J9YX20 115 aa9.71□□□□□ -0.86
PCF11-206ENST00000533018 A0A1B0GWB2 263 aa9.71□□□□□ -0.86
PCF11-206ENST00000533018 AKR1D1P51857 326 aa9.71□□□□□ -0.86
PCF11-206ENST00000533018 CD164Q04900 197 aa9.71□□□□□ -0.86
PCF11-206ENST00000533018 IFITM1P13164 125 aa9.7□□□□□ -0.86
PCF11-206ENST00000533018 ATOH7Q8N100 152 aa9.7□□□□□ -0.86
PCF11-206ENST00000533018 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
PCF11-206ENST00000533018 MUSTN1Q8IVN3 82 aa9.69□□□□□ -0.86
PCF11-206ENST00000533018 SMIM29Q86T20 159 aa9.68□□□□□ -0.86
PCF11-206ENST00000533018 A0A0G2JQZ4 141 aa9.67□□□□□ -0.86
PCF11-206ENST00000533018 Q6ZVH6 145 aa9.67□□□□□ -0.86
PCF11-206ENST00000533018 COA6Q5JTJ3 125 aaKnown RBP9.65□□□□□ -0.86
PCF11-206ENST00000533018 PCP2Q8IVA1 136 aa9.65□□□□□ -0.86
PCF11-206ENST00000533018 IGLV5-48A0A075B6I7 105 aa9.64□□□□□ -0.87
PCF11-206ENST00000533018 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
PCF11-206ENST00000533018 A4D1N5 150 aa9.64□□□□□ -0.87
PCF11-206ENST00000533018 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
PCF11-206ENST00000533018 NHP2Q9NX24 153 aaKnown RBP9.64□□□□□ -0.87
PCF11-206ENST00000533018 C1orf195Q5TG92 126 aa9.63□□□□□ -0.87
PCF11-206ENST00000533018 Q5XG85 94 aa9.62□□□□□ -0.87
PCF11-206ENST00000533018 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
PCF11-206ENST00000533018 VAMP3Q15836 100 aa9.59□□□□□ -0.87
PCF11-206ENST00000533018 F8WEM9 126 aa9.58□□□□□ -0.88
PCF11-206ENST00000533018 TCL1BO95988 128 aa9.58□□□□□ -0.88
PCF11-206ENST00000533018 KRTAP19-2Q3LHN2 52 aa9.58□□□□□ -0.88
PCF11-206ENST00000533018 MT1HP80294 61 aa9.57□□□□□ -0.88
PCF11-206ENST00000533018 SNRPEP62304 92 aaKnown RBP9.55□□□□□ -0.88
PCF11-206ENST00000533018 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
PCF11-206ENST00000533018 RPL37P61927 97 aaKnown RBP9.53□□□□□ -0.88
PCF11-206ENST00000533018 HSBP1L1C9JCN9 74 aa9.52□□□□□ -0.89
PCF11-206ENST00000533018 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
PCF11-206ENST00000533018 hADV29S1A0JD25 119 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms