RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 LAMA3Q16787 3333 aa5.88□□□□□ -1.47
CTNND1-232ENST00000532649 DNAH10OSP0CZ25 163 aa5.88□□□□□ -1.47
CTNND1-232ENST00000532649 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
CTNND1-232ENST00000532649 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
CTNND1-232ENST00000532649 IGLV6-57P01721 117 aa5.86□□□□□ -1.47
CTNND1-232ENST00000532649 GVQW2A0A096LPI5 108 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-232ENST00000532649 UQCR11O14957 56 aa5.86□□□□□ -1.47
CTNND1-232ENST00000532649 A8MWP4 228 aa5.85□□□□□ -1.47
CTNND1-232ENST00000532649 DSCR10P59022 87 aa5.85□□□□□ -1.47
CTNND1-232ENST00000532649 C9orf129Q5T035 196 aaKnown RBP5.85□□□□□ -1.47
CTNND1-232ENST00000532649 CD164Q04900 197 aa5.85□□□□□ -1.47
CTNND1-232ENST00000532649 Q6ZQT0 140 aa5.84□□□□□ -1.47
CTNND1-232ENST00000532649 CYP4F30PQ9H0H9 118 aa5.84□□□□□ -1.47
CTNND1-232ENST00000532649 GIG44P09565 113 aaPredicted RBP5.84□□□□□ -1.47
CTNND1-232ENST00000532649 HELZ2Q9BYK8 2649 aaKnown RBP5.84□□□□□ -1.47
CTNND1-232ENST00000532649 OBSCN-AS1Q96MR7 158 aa5.83□□□□□ -1.48
CTNND1-232ENST00000532649 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
CTNND1-232ENST00000532649 FLNAP21333 2647 aaKnown RBP5.83□□□□□ -1.48
CTNND1-232ENST00000532649 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
CTNND1-232ENST00000532649 TRANK1O15050 2925 aa5.82□□□□□ -1.48
CTNND1-232ENST00000532649 COA5Q86WW8 74 aa5.82□□□□□ -1.48
CTNND1-232ENST00000532649 A8MUN3 132 aa5.82□□□□□ -1.48
CTNND1-232ENST00000532649 BRCA2P51587 3418 aa5.82□□□□□ -1.48
CTNND1-232ENST00000532649 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
CTNND1-232ENST00000532649 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
CTNND1-232ENST00000532649 LCA10Q71F78 164 aa5.81□□□□□ -1.48
CTNND1-232ENST00000532649 TM2D3Q9BRN9 247 aa5.81□□□□□ -1.48
CTNND1-232ENST00000532649 TRBV7-4A0A0J9YYF1 115 aa5.81□□□□□ -1.48
CTNND1-232ENST00000532649 ERC2-IT1O76042 136 aa5.81□□□□□ -1.48
CTNND1-232ENST00000532649 ITPR3Q14573 2671 aa5.8□□□□□ -1.48
CTNND1-232ENST00000532649 MGAM2Q2M2H8 2515 aa5.8□□□□□ -1.48
CTNND1-232ENST00000532649 USP24Q9UPU5 2620 aa5.8□□□□□ -1.48
CTNND1-232ENST00000532649 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
CTNND1-232ENST00000532649 M0R2T5 61 aa5.8□□□□□ -1.48
CTNND1-232ENST00000532649 FAM168BA1KXE4 195 aa5.79□□□□□ -1.48
CTNND1-232ENST00000532649 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
CTNND1-232ENST00000532649 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
CTNND1-232ENST00000532649 K7EQZ3 153 aa5.79□□□□□ -1.48
CTNND1-232ENST00000532649 LINC00336Q6ZUF6 198 aa5.79□□□□□ -1.48
CTNND1-232ENST00000532649 CFAP46Q8IYW2 2715 aa5.79□□□□□ -1.48
CTNND1-232ENST00000532649 A0A0D9SG42 100 aa5.78□□□□□ -1.48
CTNND1-232ENST00000532649 SMR3BP02814 79 aaPredicted RBP5.78□□□□□ -1.48
CTNND1-232ENST00000532649 BPTFQ12830 3046 aa5.78□□□□□ -1.48
CTNND1-232ENST00000532649 LINC00612Q8N6U2 182 aa5.78□□□□□ -1.48
CTNND1-232ENST00000532649 ZNF575Q86XF7 245 aa5.77□□□□□ -1.49
CTNND1-232ENST00000532649 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
CTNND1-232ENST00000532649 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
CTNND1-232ENST00000532649 PRUNE2Q8WUY3 3088 aa5.76□□□□□ -1.49
CTNND1-232ENST00000532649 C15orf56Q8N910 161 aa5.75□□□□□ -1.49
CTNND1-232ENST00000532649 ZNF861PO60384 105 aa5.74□□□□□ -1.49
CTNND1-232ENST00000532649 LITAFQ99732 161 aa5.74□□□□□ -1.49
CTNND1-232ENST00000532649 A0A1B0GVX0 72 aa5.74□□□□□ -1.49
CTNND1-232ENST00000532649 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
CTNND1-232ENST00000532649 Q6ZSA8 131 aa5.74□□□□□ -1.49
CTNND1-232ENST00000532649 IGLV1-50A0A075B6I6 118 aa5.74□□□□□ -1.49
CTNND1-232ENST00000532649 A0A087WTM6 91 aa5.73□□□□□ -1.49
CTNND1-232ENST00000532649 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
CTNND1-232ENST00000532649 ZNF292O60281 2723 aa5.73□□□□□ -1.49
CTNND1-232ENST00000532649 MGAQ8IWI9 3026 aa5.72□□□□□ -1.49
CTNND1-232ENST00000532649 CENPEQ02224 2701 aa5.72□□□□□ -1.49
CTNND1-232ENST00000532649 C9orf163Q8N9P6 203 aa5.71□□□□□ -1.49
CTNND1-232ENST00000532649 CR1P17927 2039 aa5.71□□□□□ -1.5
CTNND1-232ENST00000532649 SMCPP49901 116 aaPredicted RBP5.71□□□□□ -1.5
CTNND1-232ENST00000532649 ATRQ13535 2644 aa5.71□□□□□ -1.5
CTNND1-232ENST00000532649 IGFL1Q6UW32 110 aa5.7□□□□□ -1.5
CTNND1-232ENST00000532649 LINC00528Q8N1L1 170 aa5.7□□□□□ -1.5
CTNND1-232ENST00000532649 MAST4O15021 2626 aa5.7□□□□□ -1.5
CTNND1-232ENST00000532649 KCNQ1DNQ9H478 68 aa5.69□□□□□ -1.5
CTNND1-232ENST00000532649 IGLV7-43P04211 117 aa5.69□□□□□ -1.5
CTNND1-232ENST00000532649 PRR15Q8IV56 129 aa5.68□□□□□ -1.5
CTNND1-232ENST00000532649 CASC10Q5T4H9 136 aa5.68□□□□□ -1.5
CTNND1-232ENST00000532649 FAM104AQ969W3 186 aa5.68□□□□□ -1.5
CTNND1-232ENST00000532649 HRES1P13985 223 aa5.67□□□□□ -1.5
CTNND1-232ENST00000532649 PRO0461Q9UI25 63 aa5.67□□□□□ -1.5
CTNND1-232ENST00000532649 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
CTNND1-232ENST00000532649 Q8N1X5 172 aa5.66□□□□□ -1.5
CTNND1-232ENST00000532649 UNC80Q8N2C7 3258 aa5.65□□□□□ -1.5
CTNND1-232ENST00000532649 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.5
CTNND1-232ENST00000532649 LAMA2P24043 3122 aaKnown RBP5.65□□□□□ -1.5
CTNND1-232ENST00000532649 WDFY4Q6ZS81 3184 aa5.65□□□□□ -1.51
CTNND1-232ENST00000532649 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
CTNND1-232ENST00000532649 A0A0C4DFX4 3053 aa5.64□□□□□ -1.51
CTNND1-232ENST00000532649 CDH23Q9H251 3354 aa5.64□□□□□ -1.51
CTNND1-232ENST00000532649 CFAP54Q96N23 3096 aa5.64□□□□□ -1.51
CTNND1-232ENST00000532649 AKAP13Q12802 2813 aa5.64□□□□□ -1.51
CTNND1-232ENST00000532649 H3BS24 57 aa5.63□□□□□ -1.51
CTNND1-232ENST00000532649 IGLV7-46A0A075B6I9 117 aa5.63□□□□□ -1.51
CTNND1-232ENST00000532649 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
CTNND1-232ENST00000532649 ANAPC11Q9NYG5 84 aa5.62□□□□□ -1.51
CTNND1-232ENST00000532649 XIRP2A4UGR9 3374 aa5.62□□□□□ -1.51
CTNND1-232ENST00000532649 CNBPP62633 177 aaKnown RBP5.62□□□□□ -1.51
CTNND1-232ENST00000532649 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
CTNND1-232ENST00000532649 WIPF1O43516 503 aa5.61□□□□□ -1.51
CTNND1-232ENST00000532649 PRR26Q8N8Z3 221 aa5.61□□□□□ -1.51
CTNND1-232ENST00000532649 PSORS1C2Q9UIG4 136 aa5.61□□□□□ -1.51
CTNND1-232ENST00000532649 Q1T7F1 81 aa5.6□□□□□ -1.51
CTNND1-232ENST00000532649 TNP2Q05952 138 aa5.59□□□□□ -1.51
CTNND1-232ENST00000532649 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
CTNND1-232ENST00000532649 TEP1Q99973 2627 aaKnown RBP5.59□□□□□ -1.51
CTNND1-232ENST00000532649 Q8N377 158 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms