RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 ZNF345Q14585 488 aa4.59□□□□□ -1.67
NUP98-219ENST00000532475 TP73-AS1Q9UF72 201 aa4.59□□□□□ -1.67
NUP98-219ENST00000532475 LINC00862A6NCI5 91 aa4.58□□□□□ -1.68
NUP98-219ENST00000532475 CKS1BP61024 79 aa4.58□□□□□ -1.68
NUP98-219ENST00000532475 PRLHP81277 87 aa4.58□□□□□ -1.68
NUP98-219ENST00000532475 MRPL51Q4U2R6 128 aaKnown RBP4.58□□□□□ -1.68
NUP98-219ENST00000532475 FP248Q71RG6 208 aaPredicted RBP4.58□□□□□ -1.68
NUP98-219ENST00000532475 TOMM7Q9P0U1 55 aa4.58□□□□□ -1.68
NUP98-219ENST00000532475 TRBV24-1A0A075B6N3 115 aa4.57□□□□□ -1.68
NUP98-219ENST00000532475 KANTRA0A1W2PQU2 76 aa4.57□□□□□ -1.68
NUP98-219ENST00000532475 PPP1R17O96001 155 aa4.57□□□□□ -1.68
NUP98-219ENST00000532475 RHEBQ15382 184 aa4.57□□□□□ -1.68
NUP98-219ENST00000532475 PLEKHB2Q96CS7 222 aa4.57□□□□□ -1.68
NUP98-219ENST00000532475 HMSDA8MTL9 139 aa4.56□□□□□ -1.68
NUP98-219ENST00000532475 FAM104BQ5XKR9 115 aa4.56□□□□□ -1.68
NUP98-219ENST00000532475 DAND5Q8N907 189 aa4.56□□□□□ -1.68
NUP98-219ENST00000532475 C20orf78Q9BR46 151 aa4.56□□□□□ -1.68
NUP98-219ENST00000532475 SPANXCQ9NY87 97 aa4.56□□□□□ -1.68
NUP98-219ENST00000532475 IGKV2-28A0A075B6P5 120 aa4.55□□□□□ -1.68
NUP98-219ENST00000532475 IGKV2D-28P01615 120 aa4.55□□□□□ -1.68
NUP98-219ENST00000532475 SPAG11AQ6PDA7 123 aa4.55□□□□□ -1.68
NUP98-219ENST00000532475 SMIM2Q9BVW6 85 aa4.55□□□□□ -1.68
NUP98-219ENST00000532475 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
NUP98-219ENST00000532475 CKS2P33552 79 aa4.54□□□□□ -1.68
NUP98-219ENST00000532475 Q8IZM0 81 aa4.54□□□□□ -1.68
NUP98-219ENST00000532475 LST1O00453 97 aa4.53□□□□□ -1.68
NUP98-219ENST00000532475 NPYP01303 97 aa4.53□□□□□ -1.68
NUP98-219ENST00000532475 IFI27P40305 119 aaPredicted RBP4.53□□□□□ -1.68
NUP98-219ENST00000532475 TRAV9-1A0A075B6T8 112 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 A8MUN3 132 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 D6R8Y8 96 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 F8VRH5 84 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 Q6Q795 121 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 TMEM141Q96I45 108 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 V9GYV3 84 aa4.52□□□□□ -1.69
NUP98-219ENST00000532475 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
NUP98-219ENST00000532475 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
NUP98-219ENST00000532475 TMEM126AQ9H061 195 aa4.51□□□□□ -1.69
NUP98-219ENST00000532475 OSTCQ9NRP0 149 aa4.51□□□□□ -1.69
NUP98-219ENST00000532475 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
NUP98-219ENST00000532475 A0A1B0GW54 56 aa4.5□□□□□ -1.69
NUP98-219ENST00000532475 M0R378 163 aa4.5□□□□□ -1.69
NUP98-219ENST00000532475 AMELXQ99217 191 aa4.5□□□□□ -1.69
NUP98-219ENST00000532475 LAMTOR3Q9UHA4 124 aa4.5□□□□□ -1.69
NUP98-219ENST00000532475 M0R2T5 61 aa4.49□□□□□ -1.69
NUP98-219ENST00000532475 SRP19P09132 144 aaKnown RBP4.49□□□□□ -1.69
NUP98-219ENST00000532475 PCOTHQ58A44 107 aa4.49□□□□□ -1.69
NUP98-219ENST00000532475 TOMM6Q96B49 74 aa4.49□□□□□ -1.69
NUP98-219ENST00000532475 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
NUP98-219ENST00000532475 SMIM7Q9BQ49 75 aa4.49□□□□□ -1.69
NUP98-219ENST00000532475 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
NUP98-219ENST00000532475 NAT8BQ9UHF3 227 aa4.49□□□□□ -1.69
NUP98-219ENST00000532475 SPINK1P00995 79 aa4.48□□□□□ -1.69
NUP98-219ENST00000532475 S100A1P23297 94 aa4.48□□□□□ -1.69
NUP98-219ENST00000532475 LYRM7Q5U5X0 104 aa4.48□□□□□ -1.69
NUP98-219ENST00000532475 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
NUP98-219ENST00000532475 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
NUP98-219ENST00000532475 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
NUP98-219ENST00000532475 A0A096LNJ9 63 aa4.47□□□□□ -1.69
NUP98-219ENST00000532475 A0A1B0GVG6 124 aa4.47□□□□□ -1.69
NUP98-219ENST00000532475 SMIM27A0A1W2PRY6 76 aa4.47□□□□□ -1.69
NUP98-219ENST00000532475 IGIPA6NJ69 53 aa4.47□□□□□ -1.69
NUP98-219ENST00000532475 DEFB116Q30KQ4 102 aa4.47□□□□□ -1.69
NUP98-219ENST00000532475 Q8NDZ9 215 aa4.47□□□□□ -1.69
NUP98-219ENST00000532475 A6NED7 52 aa4.46□□□□□ -1.7
NUP98-219ENST00000532475 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
NUP98-219ENST00000532475 MRPL54Q6P161 138 aaKnown RBP4.46□□□□□ -1.7
NUP98-219ENST00000532475 TMEM136Q6ZRR5 245 aa4.46□□□□□ -1.7
NUP98-219ENST00000532475 COX7B2Q8TF08 81 aa4.45□□□□□ -1.7
NUP98-219ENST00000532475 PRELID3AQ96N28 172 aa4.45□□□□□ -1.7
NUP98-219ENST00000532475 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
NUP98-219ENST00000532475 NDUFA12Q9UI09 145 aa4.44□□□□□ -1.7
NUP98-219ENST00000532475 TRAPPC1Q9Y5R8 145 aa4.44□□□□□ -1.7
NUP98-219ENST00000532475 F8W036 122 aa4.43□□□□□ -1.7
NUP98-219ENST00000532475 LAMTOR2Q9Y2Q5 125 aa4.43□□□□□ -1.7
NUP98-219ENST00000532475 J3KT08 172 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 SLC25A20O43772 301 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 SPINK8P0C7L1 97 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST1H2BOP23527 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST1H2BBP33778 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST1H2BDP58876 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 TSPEAR-AS2P59090 65 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST1H2BCP62807 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 SEC11AP67812 179 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST2H2BEQ16778 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.42□□□□□ -1.7
NUP98-219ENST00000532475 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST1H2BHQ93079 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST1H2BNQ99877 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 HIST1H2BMQ99879 126 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
NUP98-219ENST00000532475 MOBPQ13875 183 aa4.41□□□□□ -1.7
NUP98-219ENST00000532475 ADIRFQ15847 76 aa4.41□□□□□ -1.7
NUP98-219ENST00000532475 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
NUP98-219ENST00000532475 ALKAL2Q6UX46 152 aa4.41□□□□□ -1.7
NUP98-219ENST00000532475 Q8N8P6 123 aa4.41□□□□□ -1.7
NUP98-219ENST00000532475 VPS25Q9BRG1 176 aa4.41□□□□□ -1.7
NUP98-219ENST00000532475 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms