RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
TSPAN4-219ENST00000530404 PLNP26678 52 aa11.45□□□□□ -0.58
TSPAN4-219ENST00000530404 NDUFC2O95298 119 aa11.44□□□□□ -0.58
TSPAN4-219ENST00000530404 FABP4P15090 132 aa11.44□□□□□ -0.58
TSPAN4-219ENST00000530404 HERVK_113P61574 105 aa11.44□□□□□ -0.58
TSPAN4-219ENST00000530404 DPM2O94777 84 aa11.43□□□□□ -0.58
TSPAN4-219ENST00000530404 JOSD1Q15040 202 aaPredicted RBP11.43□□□□□ -0.58
TSPAN4-219ENST00000530404 ZNF73O43830 326 aaPredicted RBP11.42□□□□□ -0.58
TSPAN4-219ENST00000530404 IGKCP01834 107 aa11.42□□□□□ -0.58
TSPAN4-219ENST00000530404 NMUP48645 174 aa11.42□□□□□ -0.58
TSPAN4-219ENST00000530404 ADAMTSL4-AS1Q5T5F5 129 aa11.41□□□□□ -0.58
TSPAN4-219ENST00000530404 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
TSPAN4-219ENST00000530404 A0A0J9YXY3 114 aa11.39□□□□□ -0.59
TSPAN4-219ENST00000530404 HRCT1Q6UXD1 115 aa11.39□□□□□ -0.59
TSPAN4-219ENST00000530404 HSPB8Q9UJY1 196 aa11.39□□□□□ -0.59
TSPAN4-219ENST00000530404 LCE2CQ5TA81 110 aa11.38□□□□□ -0.59
TSPAN4-219ENST00000530404 FSIP2Q5CZC0 6907 aa11.37□□□□□ -0.59
TSPAN4-219ENST00000530404 C9orf92A6NGG3 77 aa11.34□□□□□ -0.59
TSPAN4-219ENST00000530404 KRTAP19-2Q3LHN2 52 aa11.33□□□□□ -0.6
TSPAN4-219ENST00000530404 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
TSPAN4-219ENST00000530404 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
TSPAN4-219ENST00000530404 PCOTHQ58A44 107 aa11.32□□□□□ -0.6
TSPAN4-219ENST00000530404 E9PLD3 99 aa11.31□□□□□ -0.6
TSPAN4-219ENST00000530404 LIMD2Q9BT23 127 aa11.3□□□□□ -0.6
TSPAN4-219ENST00000530404 C5orf52A6NGY3 159 aa11.29□□□□□ -0.6
TSPAN4-219ENST00000530404 SPRR1BP22528 89 aa11.29□□□□□ -0.6
TSPAN4-219ENST00000530404 LINC00308Q8TCZ7 52 aa11.29□□□□□ -0.6
TSPAN4-219ENST00000530404 LITAFQ99732 161 aa11.29□□□□□ -0.6
TSPAN4-219ENST00000530404 CRCT1Q9UGL9 99 aa11.29□□□□□ -0.6
TSPAN4-219ENST00000530404 IGLV8-61A0A075B6I0 122 aa11.28□□□□□ -0.6
TSPAN4-219ENST00000530404 MT1HP80294 61 aa11.27□□□□□ -0.61
TSPAN4-219ENST00000530404 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
TSPAN4-219ENST00000530404 DHRS4-AS1Q9P1J3 65 aa11.26□□□□□ -0.61
TSPAN4-219ENST00000530404 LAMTOR3Q9UHA4 124 aa11.26□□□□□ -0.61
TSPAN4-219ENST00000530404 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
TSPAN4-219ENST00000530404 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
TSPAN4-219ENST00000530404 Q1RN00 199 aa11.24□□□□□ -0.61
TSPAN4-219ENST00000530404 DEFB105AQ8NG35 78 aa11.24□□□□□ -0.61
TSPAN4-219ENST00000530404 H7C2G1 150 aa11.23□□□□□ -0.61
TSPAN4-219ENST00000530404 COX7BP24311 80 aa11.22□□□□□ -0.61
TSPAN4-219ENST00000530404 TTTY13Q9BZ97 58 aa11.22□□□□□ -0.61
TSPAN4-219ENST00000530404 COLCA2A8K830 154 aa11.21□□□□□ -0.61
TSPAN4-219ENST00000530404 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
TSPAN4-219ENST00000530404 TAL2Q16559 108 aa11.21□□□□□ -0.61
TSPAN4-219ENST00000530404 C6orf99Q4VX62 202 aa11.21□□□□□ -0.61
TSPAN4-219ENST00000530404 SPANXDQ9BXN6 97 aa11.21□□□□□ -0.61
TSPAN4-219ENST00000530404 SYS1-DBNDD2H3BUS1 97 aa11.2□□□□□ -0.62
TSPAN4-219ENST00000530404 TIMM17BO60830 172 aa11.2□□□□□ -0.62
TSPAN4-219ENST00000530404 ZNF815PA8K554 130 aa11.19□□□□□ -0.62
TSPAN4-219ENST00000530404 A0A0G2JQZ4 141 aa11.17□□□□□ -0.62
TSPAN4-219ENST00000530404 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
TSPAN4-219ENST00000530404 FLGP20930 4061 aaPredicted RBP11.15□□□□□ -0.62
TSPAN4-219ENST00000530404 CD164Q04900 197 aa11.15□□□□□ -0.62
TSPAN4-219ENST00000530404 LINC01545Q5VT33 79 aa11.15□□□□□ -0.62
TSPAN4-219ENST00000530404 TEX49A0A1B0GTD5 131 aa11.14□□□□□ -0.63
TSPAN4-219ENST00000530404 SMIM29Q86T20 159 aa11.13□□□□□ -0.63
TSPAN4-219ENST00000530404 SLC7A5P1Q8MH63 180 aa11.13□□□□□ -0.63
TSPAN4-219ENST00000530404 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
TSPAN4-219ENST00000530404 CFC1BP0CG36 223 aa11.12□□□□□ -0.63
TSPAN4-219ENST00000530404 C1orf195Q5TG92 126 aa11.11□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BKO60814 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BJP06899 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 LORP23490 312 aaPredicted RBP11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BOP23527 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BBP33778 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 AKR1D1P51857 326 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BDP58876 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 KRTAP10-6P60371 365 aaPredicted RBP11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BCP62807 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST2H2BEQ16778 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BHQ93079 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BNQ99877 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 HIST1H2BMQ99879 126 aa11.09□□□□□ -0.63
TSPAN4-219ENST00000530404 Q5XG85 94 aa11.07□□□□□ -0.64
TSPAN4-219ENST00000530404 TRBV7-6A0A0J9YX20 115 aa11.06□□□□□ -0.64
TSPAN4-219ENST00000530404 A0A1B0GWB2 263 aa11.06□□□□□ -0.64
TSPAN4-219ENST00000530404 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
TSPAN4-219ENST00000530404 RPL37P61927 97 aaKnown RBP11.06□□□□□ -0.64
TSPAN4-219ENST00000530404 IGLV5-48A0A075B6I7 105 aa11.05□□□□□ -0.64
TSPAN4-219ENST00000530404 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
TSPAN4-219ENST00000530404 A6NDN8 102 aa11.04□□□□□ -0.64
TSPAN4-219ENST00000530404 M0R2T5 61 aa11.03□□□□□ -0.64
TSPAN4-219ENST00000530404 KRTDAPP60985 99 aa11.01□□□□□ -0.65
TSPAN4-219ENST00000530404 ANKRD39Q53RE8 183 aa11.01□□□□□ -0.65
TSPAN4-219ENST00000530404 COX6B2Q6YFQ2 88 aa11.01□□□□□ -0.65
TSPAN4-219ENST00000530404 MUSTN1Q8IVN3 82 aa11□□□□□ -0.65
TSPAN4-219ENST00000530404 IFITM1P13164 125 aa10.97□□□□□ -0.65
TSPAN4-219ENST00000530404 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
TSPAN4-219ENST00000530404 SMIM11BQ8TCY0 68 aa10.96□□□□□ -0.65
TSPAN4-219ENST00000530404 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
TSPAN4-219ENST00000530404 PCP2Q8IVA1 136 aa10.95□□□□□ -0.66
TSPAN4-219ENST00000530404 TCL1BO95988 128 aa10.94□□□□□ -0.66
TSPAN4-219ENST00000530404 A4D1N5 150 aa10.93□□□□□ -0.66
TSPAN4-219ENST00000530404 NHP2Q9NX24 153 aaKnown RBP10.92□□□□□ -0.66
TSPAN4-219ENST00000530404 Q6ZVH6 145 aa10.91□□□□□ -0.66
TSPAN4-219ENST00000530404 TRAV13-2A0A0B4J235 113 aa10.9□□□□□ -0.66
TSPAN4-219ENST00000530404 C20orf202A1L168 122 aa10.89□□□□□ -0.67
TSPAN4-219ENST00000530404 F8WEM9 126 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 704.7 ms