RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 UBE2BP63146 152 aa6.68□□□□□ -1.34
SOX6-213ENST00000530378 SNHG12Q9BXW3 62 aa6.68□□□□□ -1.34
SOX6-213ENST00000530378 FAT1Q14517 4588 aa6.67□□□□□ -1.34
SOX6-213ENST00000530378 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
SOX6-213ENST00000530378 PPDPFQ9H3Y8 114 aa6.66□□□□□ -1.34
SOX6-213ENST00000530378 HSPG2P98160 4391 aa6.66□□□□□ -1.34
SOX6-213ENST00000530378 KIAA1109Q2LD37 5005 aa6.66□□□□□ -1.34
SOX6-213ENST00000530378 A0A0B4J2C4 111 aa6.66□□□□□ -1.34
SOX6-213ENST00000530378 XGP55808 180 aa6.66□□□□□ -1.34
SOX6-213ENST00000530378 Q1RN00 199 aa6.66□□□□□ -1.34
SOX6-213ENST00000530378 NAA38Q9BRA0 125 aaKnown RBP6.66□□□□□ -1.34
SOX6-213ENST00000530378 TRBV10-2A0A0K0K1G8 114 aa6.65□□□□□ -1.34
SOX6-213ENST00000530378 SMR3BP02814 79 aaPredicted RBP6.65□□□□□ -1.34
SOX6-213ENST00000530378 TRAV13-2A0A0B4J235 113 aa6.64□□□□□ -1.35
SOX6-213ENST00000530378 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
SOX6-213ENST00000530378 XP32Q5T750 250 aa6.64□□□□□ -1.35
SOX6-213ENST00000530378 PRO1854Q9UHT4 67 aa6.64□□□□□ -1.35
SOX6-213ENST00000530378 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
SOX6-213ENST00000530378 VPS13BQ7Z7G8 4022 aa6.63□□□□□ -1.35
SOX6-213ENST00000530378 TRAV23DV6A0A075B6W5 121 aa6.63□□□□□ -1.35
SOX6-213ENST00000530378 A0A1B0GWB2 263 aa6.63□□□□□ -1.35
SOX6-213ENST00000530378 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
SOX6-213ENST00000530378 EPM2AB3EWF7 344 aa6.62□□□□□ -1.35
SOX6-213ENST00000530378 TSPAN13O95857 204 aa6.62□□□□□ -1.35
SOX6-213ENST00000530378 SMIM11BQ8TCY0 68 aa6.62□□□□□ -1.35
SOX6-213ENST00000530378 C6orf99Q4VX62 202 aa6.61□□□□□ -1.35
SOX6-213ENST00000530378 PSORS1C2Q9UIG4 136 aa6.61□□□□□ -1.35
SOX6-213ENST00000530378 REG3GQ6UW15 175 aa6.6□□□□□ -1.35
SOX6-213ENST00000530378 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
SOX6-213ENST00000530378 PRYO14603 147 aa6.6□□□□□ -1.35
SOX6-213ENST00000530378 ZNF73O43830 326 aaPredicted RBP6.6□□□□□ -1.35
SOX6-213ENST00000530378 PSMB2P49721 201 aa6.6□□□□□ -1.35
SOX6-213ENST00000530378 KCNQ1DNQ9H478 68 aa6.6□□□□□ -1.35
SOX6-213ENST00000530378 TAX1BP3O14907 124 aa6.59□□□□□ -1.35
SOX6-213ENST00000530378 TRIAP1O43715 76 aa6.59□□□□□ -1.35
SOX6-213ENST00000530378 PRLHP81277 87 aa6.59□□□□□ -1.35
SOX6-213ENST00000530378 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
SOX6-213ENST00000530378 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
SOX6-213ENST00000530378 FAM19A1Q7Z5A9 133 aa6.58□□□□□ -1.36
SOX6-213ENST00000530378 DIRC1Q969H9 104 aa6.58□□□□□ -1.36
SOX6-213ENST00000530378 ETDCA0A1B0GVM5 59 aa6.57□□□□□ -1.36
SOX6-213ENST00000530378 H3BUT2 72 aa6.57□□□□□ -1.36
SOX6-213ENST00000530378 CDK2AP2O75956 126 aa6.57□□□□□ -1.36
SOX6-213ENST00000530378 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
SOX6-213ENST00000530378 UBE2AP49459 152 aa6.55□□□□□ -1.36
SOX6-213ENST00000530378 CLEC2BQ92478 149 aa6.55□□□□□ -1.36
SOX6-213ENST00000530378 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
SOX6-213ENST00000530378 BCE1O60756 84 aa6.55□□□□□ -1.36
SOX6-213ENST00000530378 COX7BP24311 80 aa6.55□□□□□ -1.36
SOX6-213ENST00000530378 SPRR1AP35321 89 aa6.55□□□□□ -1.36
SOX6-213ENST00000530378 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
SOX6-213ENST00000530378 C9orf118A6NHY6 69 aa6.54□□□□□ -1.36
SOX6-213ENST00000530378 B5MCH6 92 aa6.54□□□□□ -1.36
SOX6-213ENST00000530378 SCGB1C2P0DMR2 95 aa6.54□□□□□ -1.36
SOX6-213ENST00000530378 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
SOX6-213ENST00000530378 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
SOX6-213ENST00000530378 FAM218AQ96MZ4 157 aa6.53□□□□□ -1.36
SOX6-213ENST00000530378 Q6ZRX8 168 aa6.53□□□□□ -1.36
SOX6-213ENST00000530378 Q9BRP9 147 aa6.53□□□□□ -1.36
SOX6-213ENST00000530378 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.37
SOX6-213ENST00000530378 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
SOX6-213ENST00000530378 VAMP3Q15836 100 aa6.52□□□□□ -1.37
SOX6-213ENST00000530378 Q5VSD8 79 aa6.51□□□□□ -1.37
SOX6-213ENST00000530378 A0A1W2PPM0 123 aa6.5□□□□□ -1.37
SOX6-213ENST00000530378 ERC2-IT1O76042 136 aa6.5□□□□□ -1.37
SOX6-213ENST00000530378 COX6CP09669 75 aa6.5□□□□□ -1.37
SOX6-213ENST00000530378 SMCR5Q8TEV8 140 aa6.5□□□□□ -1.37
SOX6-213ENST00000530378 KRTAP13-1Q8IUC0 172 aa6.5□□□□□ -1.37
SOX6-213ENST00000530378 A0A1B0GV72 72 aa6.49□□□□□ -1.37
SOX6-213ENST00000530378 TCL1BO95988 128 aa6.49□□□□□ -1.37
SOX6-213ENST00000530378 FABP2P12104 132 aa6.49□□□□□ -1.37
SOX6-213ENST00000530378 TRBV7-6A0A0J9YX20 115 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 LINC00575Q6W349 94 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 ST20-AS1Q8NBB2 130 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 H0YGX0 51 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 ZNF861PO60384 105 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 SCGB1A1P11684 91 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
SOX6-213ENST00000530378 VPS25Q9BRG1 176 aa6.48□□□□□ -1.37
SOX6-213ENST00000530378 SLC25A20O43772 301 aa6.47□□□□□ -1.37
SOX6-213ENST00000530378 SPCS1Q9Y6A9 102 aa6.47□□□□□ -1.37
SOX6-213ENST00000530378 hADV29S1A0JD25 119 aa6.46□□□□□ -1.37
SOX6-213ENST00000530378 MTURNQ8N3F0 131 aa6.46□□□□□ -1.37
SOX6-213ENST00000530378 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.37
SOX6-213ENST00000530378 LST1O00453 97 aa6.46□□□□□ -1.38
SOX6-213ENST00000530378 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
SOX6-213ENST00000530378 LYRM7Q5U5X0 104 aa6.46□□□□□ -1.38
SOX6-213ENST00000530378 Q6ZQY7 126 aa6.46□□□□□ -1.38
SOX6-213ENST00000530378 DEFB105AQ8NG35 78 aa6.46□□□□□ -1.38
SOX6-213ENST00000530378 DHRS4-AS1Q9P1J3 65 aa6.46□□□□□ -1.38
SOX6-213ENST00000530378 H0Y9J4 135 aa6.45□□□□□ -1.38
SOX6-213ENST00000530378 Q8N1X5 172 aa6.45□□□□□ -1.38
SOX6-213ENST00000530378 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
SOX6-213ENST00000530378 ATXN8Q156A1 80 aa6.44□□□□□ -1.38
SOX6-213ENST00000530378 H3BMG7 143 aa6.43□□□□□ -1.38
SOX6-213ENST00000530378 DNAL4O96015 105 aa6.43□□□□□ -1.38
SOX6-213ENST00000530378 ANAPC11Q9NYG5 84 aa6.43□□□□□ -1.38
SOX6-213ENST00000530378 GAGE2AQ6NT46 116 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms