RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 COA5Q86WW8 74 aa10.21□□□□□ -0.77
PCDHA4-203ENST00000530339 GIG44P09565 113 aaPredicted RBP10.21□□□□□ -0.78
PCDHA4-203ENST00000530339 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.78
PCDHA4-203ENST00000530339 Q8N377 158 aa10.2□□□□□ -0.78
PCDHA4-203ENST00000530339 F8P00451 2351 aa10.18□□□□□ -0.78
PCDHA4-203ENST00000530339 OBSCN-AS1Q96MR7 158 aa10.18□□□□□ -0.78
PCDHA4-203ENST00000530339 IGFL1Q6UW32 110 aa10.18□□□□□ -0.78
PCDHA4-203ENST00000530339 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
PCDHA4-203ENST00000530339 PRR15Q8IV56 129 aa10.16□□□□□ -0.78
PCDHA4-203ENST00000530339 C15orf56Q8N910 161 aa10.16□□□□□ -0.78
PCDHA4-203ENST00000530339 CHTF8P0CG12 524 aa10.15□□□□□ -0.78
PCDHA4-203ENST00000530339 K7EIL1 84 aa10.12□□□□□ -0.79
PCDHA4-203ENST00000530339 SSBP3-AS1Q7Z2R9 100 aa10.11□□□□□ -0.79
PCDHA4-203ENST00000530339 COX6B2Q6YFQ2 88 aa10.1□□□□□ -0.79
PCDHA4-203ENST00000530339 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
PCDHA4-203ENST00000530339 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
PCDHA4-203ENST00000530339 A0A1W2PNM2 257 aa10.06□□□□□ -0.8
PCDHA4-203ENST00000530339 IGLV8-61A0A075B6I0 122 aa10.06□□□□□ -0.8
PCDHA4-203ENST00000530339 KRTAP10-11P60412 298 aa10.06□□□□□ -0.8
PCDHA4-203ENST00000530339 UQCR11O14957 56 aa10.05□□□□□ -0.8
PCDHA4-203ENST00000530339 CD164Q04900 197 aa10.05□□□□□ -0.8
PCDHA4-203ENST00000530339 Q96NJ1 140 aa10.05□□□□□ -0.8
PCDHA4-203ENST00000530339 ZNF861PO60384 105 aa10.05□□□□□ -0.8
PCDHA4-203ENST00000530339 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
PCDHA4-203ENST00000530339 C9orf163Q8N9P6 203 aa10.04□□□□□ -0.8
PCDHA4-203ENST00000530339 IGLV5-37A0A075B6J1 123 aa10.04□□□□□ -0.8
PCDHA4-203ENST00000530339 BPTFQ12830 3046 aa10.03□□□□□ -0.8
PCDHA4-203ENST00000530339 A0A1B0GVX0 72 aa10.03□□□□□ -0.8
PCDHA4-203ENST00000530339 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
PCDHA4-203ENST00000530339 IGLV5-48A0A075B6I7 105 aa10.02□□□□□ -0.81
PCDHA4-203ENST00000530339 SPANXA2-OT1Q8N9U9 137 aa10.02□□□□□ -0.81
PCDHA4-203ENST00000530339 A0A0G2JQZ4 141 aa10.02□□□□□ -0.81
PCDHA4-203ENST00000530339 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
PCDHA4-203ENST00000530339 WIPF1O43516 503 aa10.02□□□□□ -0.81
PCDHA4-203ENST00000530339 LINC00304Q8N9R0 145 aa10.01□□□□□ -0.81
PCDHA4-203ENST00000530339 PCNTO95613 3336 aa10.01□□□□□ -0.81
PCDHA4-203ENST00000530339 KRTAP10-3P60369 221 aa10.01□□□□□ -0.81
PCDHA4-203ENST00000530339 OCR1Q9BZK8 76 aa10□□□□□ -0.81
PCDHA4-203ENST00000530339 USP24Q9UPU5 2620 aa10□□□□□ -0.81
PCDHA4-203ENST00000530339 KTN1-AS1Q86SY8 53 aa9.99□□□□□ -0.81
PCDHA4-203ENST00000530339 A0A087WTM6 91 aa9.98□□□□□ -0.81
PCDHA4-203ENST00000530339 KRTAP1-3Q8IUG1 177 aa9.96□□□□□ -0.81
PCDHA4-203ENST00000530339 CHD7Q9P2D1 2997 aa9.96□□□□□ -0.81
PCDHA4-203ENST00000530339 MIR22HGQ0VDD5 57 aa9.95□□□□□ -0.82
PCDHA4-203ENST00000530339 FLNBO75369 2602 aaKnown RBP9.95□□□□□ -0.82
PCDHA4-203ENST00000530339 A0A0C4DFX4 3053 aa9.93□□□□□ -0.82
PCDHA4-203ENST00000530339 Q1T7F1 81 aa9.92□□□□□ -0.82
PCDHA4-203ENST00000530339 UTRNP46939 3433 aa9.92□□□□□ -0.82
PCDHA4-203ENST00000530339 DSCR10P59022 87 aa9.91□□□□□ -0.82
PCDHA4-203ENST00000530339 SPRR4Q96PI1 79 aa9.91□□□□□ -0.82
PCDHA4-203ENST00000530339 KRTAP1-1Q07627 177 aa9.9□□□□□ -0.83
PCDHA4-203ENST00000530339 LCA10Q71F78 164 aa9.89□□□□□ -0.83
PCDHA4-203ENST00000530339 APLNQ9ULZ1 77 aa9.89□□□□□ -0.83
PCDHA4-203ENST00000530339 IGLV7-43P04211 117 aa9.89□□□□□ -0.83
PCDHA4-203ENST00000530339 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
PCDHA4-203ENST00000530339 C5orf42Q9H799 3197 aa9.88□□□□□ -0.83
PCDHA4-203ENST00000530339 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
PCDHA4-203ENST00000530339 Q5XG85 94 aa9.86□□□□□ -0.83
PCDHA4-203ENST00000530339 CASC10Q5T4H9 136 aa9.85□□□□□ -0.83
PCDHA4-203ENST00000530339 RBM12B-AS1Q9P1G2 102 aa9.85□□□□□ -0.83
PCDHA4-203ENST00000530339 SPINT4Q6UDR6 99 aa9.85□□□□□ -0.83
PCDHA4-203ENST00000530339 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
PCDHA4-203ENST00000530339 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
PCDHA4-203ENST00000530339 CR1P17927 2039 aa9.82□□□□□ -0.84
PCDHA4-203ENST00000530339 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
PCDHA4-203ENST00000530339 FLNAP21333 2647 aaKnown RBP9.81□□□□□ -0.84
PCDHA4-203ENST00000530339 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
PCDHA4-203ENST00000530339 ANAPC11Q9NYG5 84 aa9.78□□□□□ -0.84
PCDHA4-203ENST00000530339 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
PCDHA4-203ENST00000530339 CHD9Q3L8U1 2897 aa9.77□□□□□ -0.85
PCDHA4-203ENST00000530339 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
PCDHA4-203ENST00000530339 Q8NDZ9 215 aa9.75□□□□□ -0.85
PCDHA4-203ENST00000530339 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
PCDHA4-203ENST00000530339 CFAP54Q96N23 3096 aa9.73□□□□□ -0.85
PCDHA4-203ENST00000530339 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
PCDHA4-203ENST00000530339 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
PCDHA4-203ENST00000530339 ATRQ13535 2644 aa9.73□□□□□ -0.85
PCDHA4-203ENST00000530339 ITPR3Q14573 2671 aa9.71□□□□□ -0.85
PCDHA4-203ENST00000530339 Q75L30 129 aa9.71□□□□□ -0.85
PCDHA4-203ENST00000530339 CENPEQ02224 2701 aa9.69□□□□□ -0.86
PCDHA4-203ENST00000530339 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
PCDHA4-203ENST00000530339 Q8N9P0 234 aaPredicted RBP9.68□□□□□ -0.86
PCDHA4-203ENST00000530339 SPRR1AP35321 89 aa9.67□□□□□ -0.86
PCDHA4-203ENST00000530339 HTTP42858 3142 aa9.67□□□□□ -0.86
PCDHA4-203ENST00000530339 AKAP13Q12802 2813 aa9.65□□□□□ -0.87
PCDHA4-203ENST00000530339 OXTP01178 125 aa9.63□□□□□ -0.87
PCDHA4-203ENST00000530339 LINC01558Q9Y6Z2 57 aa9.63□□□□□ -0.87
PCDHA4-203ENST00000530339 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
PCDHA4-203ENST00000530339 Q6ZSA8 131 aa9.62□□□□□ -0.87
PCDHA4-203ENST00000530339 Q8N1X5 172 aa9.61□□□□□ -0.87
PCDHA4-203ENST00000530339 SPRR1BP22528 89 aa9.6□□□□□ -0.87
PCDHA4-203ENST00000530339 MAST4O15021 2626 aa9.6□□□□□ -0.87
PCDHA4-203ENST00000530339 TNP2Q05952 138 aa9.6□□□□□ -0.87
PCDHA4-203ENST00000530339 RANBP2P49792 3224 aaKnown RBP9.59□□□□□ -0.87
PCDHA4-203ENST00000530339 TRANK1O15050 2925 aa9.58□□□□□ -0.88
PCDHA4-203ENST00000530339 HRES1P13985 223 aa9.58□□□□□ -0.88
PCDHA4-203ENST00000530339 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
PCDHA4-203ENST00000530339 LAMA2P24043 3122 aaKnown RBP9.57□□□□□ -0.88
PCDHA4-203ENST00000530339 Q5VV11 94 aa9.57□□□□□ -0.88
PCDHA4-203ENST00000530339 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms