RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 REG3GQ6UW15 175 aa15.29■□□□□ 0.04
LDLRAD3-203ENST00000528989 PRYO14603 147 aa15.28■□□□□ 0.04
LDLRAD3-203ENST00000528989 RPL28P46779 137 aaKnown RBP15.28■□□□□ 0.04
LDLRAD3-203ENST00000528989 FAT1Q14517 4588 aa15.28■□□□□ 0.04
LDLRAD3-203ENST00000528989 KIAA1109Q2LD37 5005 aa15.27■□□□□ 0.04
LDLRAD3-203ENST00000528989 TRIAP1O43715 76 aa15.27■□□□□ 0.04
LDLRAD3-203ENST00000528989 HSPG2P98160 4391 aa15.27■□□□□ 0.03
LDLRAD3-203ENST00000528989 SPRR1AP35321 89 aa15.27■□□□□ 0.03
LDLRAD3-203ENST00000528989 VPS13BQ7Z7G8 4022 aa15.27■□□□□ 0.03
LDLRAD3-203ENST00000528989 KRTAP4-16G5E9R7 235 aaPredicted RBP15.25■□□□□ 0.03
LDLRAD3-203ENST00000528989 CDK2AP2O75956 126 aa15.25■□□□□ 0.03
LDLRAD3-203ENST00000528989 PSMB2P49721 201 aa15.25■□□□□ 0.03
LDLRAD3-203ENST00000528989 DIRC1Q969H9 104 aa15.25■□□□□ 0.03
LDLRAD3-203ENST00000528989 H3BUT2 72 aa15.24■□□□□ 0.03
LDLRAD3-203ENST00000528989 C1orf137Q5JT78 98 aa15.23■□□□□ 0.03
LDLRAD3-203ENST00000528989 C9orf118A6NHY6 69 aa15.22■□□□□ 0.03
LDLRAD3-203ENST00000528989 RYR1P21817 5038 aa15.22■□□□□ 0.03
LDLRAD3-203ENST00000528989 CBY1Q9Y3M2 126 aa15.21■□□□□ 0.03
LDLRAD3-203ENST00000528989 FAM19A1Q7Z5A9 133 aa15.2■□□□□ 0.02
LDLRAD3-203ENST00000528989 LINC00528Q8N1L1 170 aa15.2■□□□□ 0.02
LDLRAD3-203ENST00000528989 PRLHP81277 87 aa15.2■□□□□ 0.02
LDLRAD3-203ENST00000528989 ETDCA0A1B0GVM5 59 aa15.19■□□□□ 0.02
LDLRAD3-203ENST00000528989 BCE1O60756 84 aa15.19■□□□□ 0.02
LDLRAD3-203ENST00000528989 B5MCH6 92 aa15.18■□□□□ 0.02
LDLRAD3-203ENST00000528989 SRRM2Q9UQ35 2752 aaKnown RBP15.17■□□□□ 0.02
LDLRAD3-203ENST00000528989 SCGB1C2P0DMR2 95 aa15.16■□□□□ 0.02
LDLRAD3-203ENST00000528989 ELOF1P60002 83 aaKnown RBP15.16■□□□□ 0.02
LDLRAD3-203ENST00000528989 COX7BP24311 80 aa15.16■□□□□ 0.02
LDLRAD3-203ENST00000528989 KRTAP17-1Q9BYP8 105 aa15.16■□□□□ 0.02
LDLRAD3-203ENST00000528989 Q6ZRX8 168 aa15.15■□□□□ 0.02
LDLRAD3-203ENST00000528989 CLEC2BQ92478 149 aa15.15■□□□□ 0.02
LDLRAD3-203ENST00000528989 FAM218AQ96MZ4 157 aa15.15■□□□□ 0.02
LDLRAD3-203ENST00000528989 VAMP3Q15836 100 aa15.14■□□□□ 0.01
LDLRAD3-203ENST00000528989 Q9BRP9 147 aa15.14■□□□□ 0.01
LDLRAD3-203ENST00000528989 TRBV7-6A0A0J9YX20 115 aa15.13■□□□□ 0.01
LDLRAD3-203ENST00000528989 COX6CP09669 75 aa15.13■□□□□ 0.01
LDLRAD3-203ENST00000528989 UBE2AP49459 152 aa15.13■□□□□ 0.01
LDLRAD3-203ENST00000528989 RPL37AP61513 92 aaKnown RBP15.12■□□□□ 0.01
LDLRAD3-203ENST00000528989 KRTAP13-1Q8IUC0 172 aa15.12■□□□□ 0.01
LDLRAD3-203ENST00000528989 A0A1W2PPM0 123 aa15.11■□□□□ 0.01
LDLRAD3-203ENST00000528989 IGLV7-43P04211 117 aa15.11■□□□□ 0.01
LDLRAD3-203ENST00000528989 H0YGX0 51 aa15.09■□□□□ 0.01
LDLRAD3-203ENST00000528989 LINC00575Q6W349 94 aa15.09■□□□□ 0.01
LDLRAD3-203ENST00000528989 SMCR5Q8TEV8 140 aa15.09■□□□□ 0.01
LDLRAD3-203ENST00000528989 HIGD2AQ9BW72 106 aa15.09■□□□□ 0.01
LDLRAD3-203ENST00000528989 ERC2-IT1O76042 136 aa15.08■□□□□ 0
LDLRAD3-203ENST00000528989 KRTAP10-4P60372 401 aaPredicted RBP15.07■□□□□ 0
LDLRAD3-203ENST00000528989 BIRC6Q9NR09 4857 aa15.07■□□□□ 0
LDLRAD3-203ENST00000528989 H0Y9J4 135 aa15.06■□□□□ 0
LDLRAD3-203ENST00000528989 ZNF861PO60384 105 aa15.06■□□□□ 0
LDLRAD3-203ENST00000528989 TCL1BO95988 128 aa15.06■□□□□ 0
LDLRAD3-203ENST00000528989 FABP2P12104 132 aa15.05■□□□□ -0
LDLRAD3-203ENST00000528989 hADV29S1A0JD25 119 aa15.02■□□□□ -0
LDLRAD3-203ENST00000528989 FAM229AH3BQW9 127 aa15.01□□□□□ -0.01
LDLRAD3-203ENST00000528989 Q5VSD8 79 aa15.01□□□□□ -0.01
LDLRAD3-203ENST00000528989 DHRS4-AS1Q9P1J3 65 aa15.01□□□□□ -0.01
LDLRAD3-203ENST00000528989 INAFM2P0DMQ5 153 aa15□□□□□ -0.01
LDLRAD3-203ENST00000528989 LST1O00453 97 aa14.99□□□□□ -0.01
LDLRAD3-203ENST00000528989 SLC25A20O43772 301 aa14.99□□□□□ -0.01
LDLRAD3-203ENST00000528989 ST20-AS1Q8NBB2 130 aa14.99□□□□□ -0.01
LDLRAD3-203ENST00000528989 SPCS1Q9Y6A9 102 aa14.99□□□□□ -0.01
LDLRAD3-203ENST00000528989 LYRM7Q5U5X0 104 aa14.98□□□□□ -0.01
LDLRAD3-203ENST00000528989 Q8N1X5 172 aa14.96□□□□□ -0.01
LDLRAD3-203ENST00000528989 A0A1B0GV90 55 aa14.95□□□□□ -0.02
LDLRAD3-203ENST00000528989 ATXN8Q156A1 80 aa14.95□□□□□ -0.02
LDLRAD3-203ENST00000528989 Q6ZQY7 126 aa14.95□□□□□ -0.02
LDLRAD3-203ENST00000528989 TRBV20-1A0A075B6N2 111 aa14.95□□□□□ -0.02
LDLRAD3-203ENST00000528989 H3BMG7 143 aa14.95□□□□□ -0.02
LDLRAD3-203ENST00000528989 PLA2G1BP04054 148 aaKnown RBP14.95□□□□□ -0.02
LDLRAD3-203ENST00000528989 DEFB105AQ8NG35 78 aa14.92□□□□□ -0.02
LDLRAD3-203ENST00000528989 A0A1B0GX51 115 aa14.91□□□□□ -0.02
LDLRAD3-203ENST00000528989 TRACP01848 142 aa14.91□□□□□ -0.02
LDLRAD3-203ENST00000528989 K7EP34 96 aa14.9□□□□□ -0.02
LDLRAD3-203ENST00000528989 SNCGO76070 127 aa14.89□□□□□ -0.03
LDLRAD3-203ENST00000528989 DNAL4O96015 105 aa14.89□□□□□ -0.03
LDLRAD3-203ENST00000528989 MTURNQ8N3F0 131 aa14.89□□□□□ -0.03
LDLRAD3-203ENST00000528989 LINC01547P58512 204 aaPredicted RBP14.87□□□□□ -0.03
LDLRAD3-203ENST00000528989 SPINK6Q6UWN8 80 aa14.87□□□□□ -0.03
LDLRAD3-203ENST00000528989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.87□□□□□ -0.03
LDLRAD3-203ENST00000528989 ANAPC11Q9NYG5 84 aa14.87□□□□□ -0.03
LDLRAD3-203ENST00000528989 GAGE2AQ6NT46 116 aa14.86□□□□□ -0.03
LDLRAD3-203ENST00000528989 KRTAP4-5Q9BYR2 181 aa14.85□□□□□ -0.03
LDLRAD3-203ENST00000528989 SPRR4Q96PI1 79 aa14.84□□□□□ -0.03
LDLRAD3-203ENST00000528989 C9JAW5 83 aa14.84□□□□□ -0.03
LDLRAD3-203ENST00000528989 Q8N377 158 aa14.83□□□□□ -0.04
LDLRAD3-203ENST00000528989 IGLV5-48A0A075B6I7 105 aa14.81□□□□□ -0.04
LDLRAD3-203ENST00000528989 GTF2H5Q6ZYL4 71 aa14.81□□□□□ -0.04
LDLRAD3-203ENST00000528989 ORMDL1Q9P0S3 153 aa14.81□□□□□ -0.04
LDLRAD3-203ENST00000528989 C3orf22Q8N5N4 141 aa14.8□□□□□ -0.04
LDLRAD3-203ENST00000528989 HERC2O95714 4834 aa14.79□□□□□ -0.04
LDLRAD3-203ENST00000528989 BAALC-AS2P0C853 105 aa14.79□□□□□ -0.04
LDLRAD3-203ENST00000528989 TEX49A0A1B0GTD5 131 aa14.78□□□□□ -0.04
LDLRAD3-203ENST00000528989 KRTAP1-4P0C5Y4 121 aa14.78□□□□□ -0.04
LDLRAD3-203ENST00000528989 ZNF706Q9Y5V0 76 aaPredicted RBP14.77□□□□□ -0.05
LDLRAD3-203ENST00000528989 OCIAD2Q56VL3 154 aa14.75□□□□□ -0.05
LDLRAD3-203ENST00000528989 LINC00483Q53H64 154 aa14.74□□□□□ -0.05
LDLRAD3-203ENST00000528989 SMIM29Q86T20 159 aa14.74□□□□□ -0.05
LDLRAD3-203ENST00000528989 PKHD1L1Q86WI1 4243 aa14.74□□□□□ -0.05
LDLRAD3-203ENST00000528989 PRO0461Q9UI25 63 aa14.74□□□□□ -0.05
LDLRAD3-203ENST00000528989 SPRR1BP22528 89 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms