RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
TRAPPC4-208ENST00000527680 IGLV6-57P01721 117 aa12.53□□□□□ -0.4
TRAPPC4-208ENST00000527680 LINC00310P59036 64 aa12.52□□□□□ -0.41
TRAPPC4-208ENST00000527680 LINC01547P58512 204 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-208ENST00000527680 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-208ENST00000527680 ZNF73O43830 326 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-208ENST00000527680 A0A0J9YXY3 114 aa12.47□□□□□ -0.41
TRAPPC4-208ENST00000527680 ADAMTSL4-AS1Q5T5F5 129 aa12.47□□□□□ -0.41
TRAPPC4-208ENST00000527680 SOSTDC1Q6X4U4 206 aa12.47□□□□□ -0.41
TRAPPC4-208ENST00000527680 ST20-AS1Q8NBB2 130 aa12.47□□□□□ -0.41
TRAPPC4-208ENST00000527680 CBY1Q9Y3M2 126 aa12.46□□□□□ -0.41
TRAPPC4-208ENST00000527680 EIF4EBP3O60516 100 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-208ENST00000527680 KRTAP4-1Q9BYQ7 146 aa12.45□□□□□ -0.42
TRAPPC4-208ENST00000527680 OR13C6PQ8NH95 151 aa12.44□□□□□ -0.42
TRAPPC4-208ENST00000527680 E9PLD3 99 aa12.42□□□□□ -0.42
TRAPPC4-208ENST00000527680 KRTAP9-6A0A140TA67 174 aa12.41□□□□□ -0.42
TRAPPC4-208ENST00000527680 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
TRAPPC4-208ENST00000527680 XP32Q5T750 250 aa12.38□□□□□ -0.43
TRAPPC4-208ENST00000527680 SLC25A34Q6PIV7 304 aa12.38□□□□□ -0.43
TRAPPC4-208ENST00000527680 HRCT1Q6UXD1 115 aa12.38□□□□□ -0.43
TRAPPC4-208ENST00000527680 LINC00308Q8TCZ7 52 aa12.37□□□□□ -0.43
TRAPPC4-208ENST00000527680 SPANXCQ9NY87 97 aa12.37□□□□□ -0.43
TRAPPC4-208ENST00000527680 COLCA2A8K830 154 aa12.36□□□□□ -0.43
TRAPPC4-208ENST00000527680 DHRS4-AS1Q9P1J3 65 aa12.35□□□□□ -0.43
TRAPPC4-208ENST00000527680 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
TRAPPC4-208ENST00000527680 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
TRAPPC4-208ENST00000527680 LIMD2Q9BT23 127 aa12.33□□□□□ -0.44
TRAPPC4-208ENST00000527680 LITAFQ99732 161 aa12.32□□□□□ -0.44
TRAPPC4-208ENST00000527680 TIMM17BO60830 172 aa12.31□□□□□ -0.44
TRAPPC4-208ENST00000527680 SPRR1BP22528 89 aa12.31□□□□□ -0.44
TRAPPC4-208ENST00000527680 TAL2Q16559 108 aa12.31□□□□□ -0.44
TRAPPC4-208ENST00000527680 SLC7A5P1Q8MH63 180 aa12.31□□□□□ -0.44
TRAPPC4-208ENST00000527680 ZNF815PA8K554 130 aa12.3□□□□□ -0.44
TRAPPC4-208ENST00000527680 SPANXDQ9BXN6 97 aa12.3□□□□□ -0.44
TRAPPC4-208ENST00000527680 COX7BP24311 80 aa12.29□□□□□ -0.44
TRAPPC4-208ENST00000527680 LINC00518Q8N0U6 118 aa12.29□□□□□ -0.44
TRAPPC4-208ENST00000527680 DEFB105AQ8NG35 78 aa12.29□□□□□ -0.44
TRAPPC4-208ENST00000527680 C9orf92A6NGG3 77 aa12.27□□□□□ -0.45
TRAPPC4-208ENST00000527680 C6orf99Q4VX62 202 aa12.27□□□□□ -0.45
TRAPPC4-208ENST00000527680 Q1RN00 199 aa12.26□□□□□ -0.45
TRAPPC4-208ENST00000527680 ELOF1P60002 83 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-208ENST00000527680 LINC01545Q5VT33 79 aa12.25□□□□□ -0.45
TRAPPC4-208ENST00000527680 PET117Q6UWS5 81 aa12.25□□□□□ -0.45
TRAPPC4-208ENST00000527680 PCOTHQ58A44 107 aa12.24□□□□□ -0.45
TRAPPC4-208ENST00000527680 TTTY13Q9BZ97 58 aa12.24□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BKO60814 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BJP06899 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BOP23527 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BBP33778 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BDP58876 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BCP62807 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST2H2BEQ16778 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BHQ93079 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BNQ99877 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 HIST1H2BMQ99879 126 aa12.23□□□□□ -0.45
TRAPPC4-208ENST00000527680 PRO1933Q9H354 126 aa12.22□□□□□ -0.45
TRAPPC4-208ENST00000527680 TEX49A0A1B0GTD5 131 aa12.21□□□□□ -0.45
TRAPPC4-208ENST00000527680 IGLV8-61A0A075B6I0 122 aa12.2□□□□□ -0.46
TRAPPC4-208ENST00000527680 SCGB1D4Q6XE38 83 aa12.2□□□□□ -0.46
TRAPPC4-208ENST00000527680 H7C2G1 150 aa12.19□□□□□ -0.46
TRAPPC4-208ENST00000527680 CD164Q04900 197 aa12.19□□□□□ -0.46
TRAPPC4-208ENST00000527680 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-208ENST00000527680 AKR1D1P51857 326 aa12.17□□□□□ -0.46
TRAPPC4-208ENST00000527680 A6NDN8 102 aa12.16□□□□□ -0.46
TRAPPC4-208ENST00000527680 C3orf79P0CE67 100 aa12.16□□□□□ -0.46
TRAPPC4-208ENST00000527680 COPS9Q8WXC6 57 aa12.16□□□□□ -0.46
TRAPPC4-208ENST00000527680 TRBV7-6A0A0J9YX20 115 aa12.15□□□□□ -0.46
TRAPPC4-208ENST00000527680 KRTDAPP60985 99 aa12.15□□□□□ -0.46
TRAPPC4-208ENST00000527680 LCE2CQ5TA81 110 aa12.15□□□□□ -0.46
TRAPPC4-208ENST00000527680 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
TRAPPC4-208ENST00000527680 IFITM1P13164 125 aa12.11□□□□□ -0.47
TRAPPC4-208ENST00000527680 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
TRAPPC4-208ENST00000527680 A0A0G2JQZ4 141 aa12.09□□□□□ -0.47
TRAPPC4-208ENST00000527680 C20orf202A1L168 122 aa12.08□□□□□ -0.48
TRAPPC4-208ENST00000527680 C1orf195Q5TG92 126 aa12.08□□□□□ -0.48
TRAPPC4-208ENST00000527680 MUSTN1Q8IVN3 82 aa12.08□□□□□ -0.48
TRAPPC4-208ENST00000527680 KRTAP19-2Q3LHN2 52 aa12.07□□□□□ -0.48
TRAPPC4-208ENST00000527680 Q5XG85 94 aa12.07□□□□□ -0.48
TRAPPC4-208ENST00000527680 IGLV5-48A0A075B6I7 105 aa12.06□□□□□ -0.48
TRAPPC4-208ENST00000527680 A4D1N5 150 aa12.06□□□□□ -0.48
TRAPPC4-208ENST00000527680 ANKRD39Q53RE8 183 aa12.06□□□□□ -0.48
TRAPPC4-208ENST00000527680 Q6ZVH6 145 aa12.06□□□□□ -0.48
TRAPPC4-208ENST00000527680 MT1HP80294 61 aa12.05□□□□□ -0.48
TRAPPC4-208ENST00000527680 ATOH7Q8N100 152 aa12.05□□□□□ -0.48
TRAPPC4-208ENST00000527680 NHP2Q9NX24 153 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-208ENST00000527680 TRAV13-2A0A0B4J235 113 aa12.02□□□□□ -0.49
TRAPPC4-208ENST00000527680 CFC1BP0CG36 223 aa12.02□□□□□ -0.49
TRAPPC4-208ENST00000527680 PCP2Q8IVA1 136 aa12.02□□□□□ -0.49
TRAPPC4-208ENST00000527680 FSIP2Q5CZC0 6907 aa12.02□□□□□ -0.49
TRAPPC4-208ENST00000527680 SMIM11BQ8TCY0 68 aa12.01□□□□□ -0.49
TRAPPC4-208ENST00000527680 CRCT1Q9UGL9 99 aa12.01□□□□□ -0.49
TRAPPC4-208ENST00000527680 TCL1BO95988 128 aa12□□□□□ -0.49
TRAPPC4-208ENST00000527680 COA6Q5JTJ3 125 aaKnown RBP12□□□□□ -0.49
TRAPPC4-208ENST00000527680 VAMP3Q15836 100 aa11.98□□□□□ -0.49
TRAPPC4-208ENST00000527680 F8WEM9 126 aa11.97□□□□□ -0.49
TRAPPC4-208ENST00000527680 RPL37P61927 97 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-208ENST00000527680 M0R2T5 61 aa11.95□□□□□ -0.5
TRAPPC4-208ENST00000527680 COX6B2Q6YFQ2 88 aa11.94□□□□□ -0.5
TRAPPC4-208ENST00000527680 SNRPEP62304 92 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms