RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 PCP4L1A6NKN8 68 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 SNCGO76070 127 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 VPREB1P12018 145 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 HINT1P49773 126 aaPredicted RBP2.42□□□□□ -2.02
C11orf54-204ENST00000527003 FXYD2P54710 66 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 NPC2P61916 151 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 COL5A1-AS1Q5SY13 56 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 S100A7L2Q5SY68 101 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 SOSTDC1Q6X4U4 206 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 SPACA4Q8TDM5 124 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 PLAC8Q9NZF1 115 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 PRO1854Q9UHT4 67 aa2.42□□□□□ -2.02
C11orf54-204ENST00000527003 HYDINQ4G0P3 5121 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 IGKV2-28A0A075B6P5 120 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 TRBV7-6A0A0J9YX20 115 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 M0QXV9 152 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 IGKV2D-28P01615 120 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 IGLV6-57P01721 117 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 COX6CP09669 75 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 CFC1BP0CG36 223 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 CFC1P0CG37 223 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 VAMP3Q15836 100 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 BATFQ16520 125 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 LYRM7Q5U5X0 104 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 Q6ZSA8 131 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 MRPL55Q7Z7F7 128 aaKnown RBP2.41□□□□□ -2.02
C11orf54-204ENST00000527003 OR13C6PQ8NH95 151 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 KCNQ1DNQ9H478 68 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 NHP2Q9NX24 153 aaKnown RBP2.41□□□□□ -2.02
C11orf54-204ENST00000527003 C22orf24Q9Y442 160 aa2.41□□□□□ -2.02
C11orf54-204ENST00000527003 IGLV1-50A0A075B6I6 118 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 A0A1W2PNN7 141 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 H0YGX0 51 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 NCR3O14931 201 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 RPL13AP40429 203 aaKnown RBP2.4□□□□□ -2.03
C11orf54-204ENST00000527003 RPL28P46779 137 aaKnown RBP2.4□□□□□ -2.03
C11orf54-204ENST00000527003 KRTAP10-1P60331 282 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 Q1RN00 199 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 LINC01620Q4KN68 170 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 SERTAD4-AS1Q5TG53 156 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 FAM19A5Q7Z5A7 132 aaPredicted RBP2.4□□□□□ -2.03
C11orf54-204ENST00000527003 LINC00337Q8N6G1 96 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 C7orf33Q8WU49 177 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 SNHG12Q9BXW3 62 aa2.4□□□□□ -2.03
C11orf54-204ENST00000527003 RYR3Q15413 4870 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 TRAV23DV6A0A075B6W5 121 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 TRBV10-3A0A0K0K1G6 114 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 FAM168BA1KXE4 195 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 ZNF73O43830 326 aaPredicted RBP2.39□□□□□ -2.03
C11orf54-204ENST00000527003 CHTF8P0CG12 524 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 INAFM2P0DMQ5 153 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 PSMB2P49721 201 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 KRTAP10-12P60413 245 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 UBE2BP63146 152 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 PRR3P79522 188 aaKnown RBP2.39□□□□□ -2.03
C11orf54-204ENST00000527003 CIRBP-AS1Q8TBR5 109 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 DIRC1Q969H9 104 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 LINC00167Q96N53 147 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 FRAS1Q86XX4 4008 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 HECTD4Q9Y4D8 3996 aa2.39□□□□□ -2.03
C11orf54-204ENST00000527003 TRBV20-1A0A075B6N2 111 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 A0A1B0GX51 115 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 GAGE10A6NGK3 116 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 H0Y9J4 135 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 H3BQ85 93 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 H7C2G1 150 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 PANO1I0J062 215 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 K7ERJ3 54 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 SLC25A20O43772 301 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 CDK2AP2O75956 126 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 TSPAN13O95857 204 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 SCGB1C2P0DMR2 95 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 FABP2P12104 132 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 SPRR1AP35321 89 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 FUSP35637 526 aaKnown RBP eCLIP2.38□□□□□ -2.03
C11orf54-204ENST00000527003 REG3GQ6UW15 175 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 SCXQ7RTU7 201 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 KRTAP7-1Q8IUC3 87 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 Q8NDZ9 215 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 SMIM11BQ8TCY0 68 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 DHRS4-AS1Q9P1J3 65 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
C11orf54-204ENST00000527003 ETDCA0A1B0GVM5 59 aa2.37□□□□□ -2.03
C11orf54-204ENST00000527003 RPL37AP8A6NKH3 93 aa2.37□□□□□ -2.03
C11orf54-204ENST00000527003 TAX1BP3O14907 124 aa2.37□□□□□ -2.03
C11orf54-204ENST00000527003 BCE1O60756 84 aa2.37□□□□□ -2.03
C11orf54-204ENST00000527003 COX7BP24311 80 aa2.37□□□□□ -2.03
C11orf54-204ENST00000527003 ELOF1P60002 83 aaKnown RBP2.37□□□□□ -2.03
C11orf54-204ENST00000527003 C6orf99Q4VX62 202 aa2.37□□□□□ -2.03
C11orf54-204ENST00000527003 PHF5AQ7RTV0 110 aaKnown RBP2.37□□□□□ -2.03
C11orf54-204ENST00000527003 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
C11orf54-204ENST00000527003 A0A1W2PPM0 123 aa2.36□□□□□ -2.03
C11orf54-204ENST00000527003 KRTAP4-16G5E9R7 235 aaPredicted RBP2.36□□□□□ -2.03
C11orf54-204ENST00000527003 H3BUT2 72 aa2.36□□□□□ -2.03
C11orf54-204ENST00000527003 TRACP01848 142 aa2.36□□□□□ -2.03
C11orf54-204ENST00000527003 UBE2AP49459 152 aa2.36□□□□□ -2.03
C11orf54-204ENST00000527003 ATXN8Q156A1 80 aa2.36□□□□□ -2.03
C11orf54-204ENST00000527003 OCIAD2Q56VL3 154 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms