RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TRIOBPQ9H2D6 2365 aa1.35□□□□□ -2.19
SKP1-209ENST00000522552 COX6A2Q02221 97 aa1.35□□□□□ -2.19
SKP1-209ENST00000522552 A0A1B0GUL6 1792 aa1.35□□□□□ -2.19
SKP1-209ENST00000522552 FANCD2Q9BXW9 1451 aa1.34□□□□□ -2.19
SKP1-209ENST00000522552 K7EMI3 77 aa1.34□□□□□ -2.19
SKP1-209ENST00000522552 MRPL34Q9BQ48 92 aaKnown RBP1.34□□□□□ -2.19
SKP1-209ENST00000522552 SNRPGP15A8MWD9 76 aa1.33□□□□□ -2.2
SKP1-209ENST00000522552 Q8IZM0 81 aa1.33□□□□□ -2.2
SKP1-209ENST00000522552 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
SKP1-209ENST00000522552 F8P00451 2351 aa1.32□□□□□ -2.2
SKP1-209ENST00000522552 TNRC6CQ9HCJ0 1690 aaKnown RBP1.32□□□□□ -2.2
SKP1-209ENST00000522552 SPTBN1Q01082 2364 aaKnown RBP1.32□□□□□ -2.2
SKP1-209ENST00000522552 ZNF292O60281 2723 aa1.31□□□□□ -2.2
SKP1-209ENST00000522552 C3P01024 1663 aa1.31□□□□□ -2.2
SKP1-209ENST00000522552 ETDCA0A1B0GVM5 59 aa1.31□□□□□ -2.2
SKP1-209ENST00000522552 DEFB114Q30KQ6 69 aa1.31□□□□□ -2.2
SKP1-209ENST00000522552 NCBP2-AS2Q69YL0 99 aa1.3□□□□□ -2.2
SKP1-209ENST00000522552 ANKRD36CQ5JPF3 1778 aa1.3□□□□□ -2.2
SKP1-209ENST00000522552 REV3LO60673 3130 aa1.3□□□□□ -2.2
SKP1-209ENST00000522552 BIVM-ERCC5R4GMW8 1640 aa1.3□□□□□ -2.2
SKP1-209ENST00000522552 PRB3Q04118 309 aaPredicted RBP1.29□□□□□ -2.2
SKP1-209ENST00000522552 POLQO75417 2590 aa1.29□□□□□ -2.2
SKP1-209ENST00000522552 DEFB131BA0A096LNP1 70 aa1.29□□□□□ -2.2
SKP1-209ENST00000522552 M0R1W7 72 aa1.29□□□□□ -2.2
SKP1-209ENST00000522552 MUC6Q6W4X9 2439 aa1.28□□□□□ -2.2
SKP1-209ENST00000522552 MRPL33O75394 65 aaKnown RBP1.28□□□□□ -2.2
SKP1-209ENST00000522552 CRIP1P50238 77 aa1.28□□□□□ -2.2
SKP1-209ENST00000522552 MEGF8Q7Z7M0 2845 aa1.28□□□□□ -2.2
SKP1-209ENST00000522552 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
SKP1-209ENST00000522552 TTC28Q96AY4 2481 aa1.27□□□□□ -2.21
SKP1-209ENST00000522552 GVINP1Q7Z2Y8 2422 aa1.27□□□□□ -2.21
SKP1-209ENST00000522552 COX6B1P14854 86 aa1.27□□□□□ -2.21
SKP1-209ENST00000522552 SPRR1AP35321 89 aa1.27□□□□□ -2.21
SKP1-209ENST00000522552 NMES1Q9C002 83 aa1.27□□□□□ -2.21
SKP1-209ENST00000522552 ADCY10Q96PN6 1610 aa1.27□□□□□ -2.21
SKP1-209ENST00000522552 CCL22O00626 93 aa1.26□□□□□ -2.21
SKP1-209ENST00000522552 NDUFA3O95167 84 aa1.26□□□□□ -2.21
SKP1-209ENST00000522552 COX6B2Q6YFQ2 88 aa1.26□□□□□ -2.21
SKP1-209ENST00000522552 CHD9Q3L8U1 2897 aa1.26□□□□□ -2.21
SKP1-209ENST00000522552 EFCAB6Q5THR3 1501 aa1.26□□□□□ -2.21
SKP1-209ENST00000522552 LELP1Q5T871 98 aa1.26□□□□□ -2.21
SKP1-209ENST00000522552 IGIPA6NJ69 53 aa1.25□□□□□ -2.21
SKP1-209ENST00000522552 Q5VSD8 79 aa1.25□□□□□ -2.21
SKP1-209ENST00000522552 ABCA5Q8WWZ7 1642 aa1.24□□□□□ -2.21
SKP1-209ENST00000522552 SERF2P84101 59 aa1.24□□□□□ -2.21
SKP1-209ENST00000522552 CDKN2A-AS1Q9UH64 79 aa1.24□□□□□ -2.21
SKP1-209ENST00000522552 ALMS1Q8TCU4 4167 aa1.24□□□□□ -2.21
SKP1-209ENST00000522552 APLNQ9ULZ1 77 aa1.23□□□□□ -2.21
SKP1-209ENST00000522552 PKDREJQ9NTG1 2253 aa1.23□□□□□ -2.21
SKP1-209ENST00000522552 AGLP35573 1532 aa1.23□□□□□ -2.21
SKP1-209ENST00000522552 NRXN3Q9Y4C0 1643 aa1.22□□□□□ -2.21
SKP1-209ENST00000522552 SPRR1BP22528 89 aa1.22□□□□□ -2.21
SKP1-209ENST00000522552 H1FX-AS1Q4G0G2 97 aa1.22□□□□□ -2.21
SKP1-209ENST00000522552 ANK2Q01484 3957 aa1.21□□□□□ -2.22
SKP1-209ENST00000522552 KNL1Q8NG31 2342 aa1.21□□□□□ -2.22
SKP1-209ENST00000522552 DEFB105AQ8NG35 78 aa1.21□□□□□ -2.22
SKP1-209ENST00000522552 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
SKP1-209ENST00000522552 C4AP0C0L4 1744 aa1.21□□□□□ -2.22
SKP1-209ENST00000522552 C4BP0C0L5 1744 aa1.21□□□□□ -2.22
SKP1-209ENST00000522552 PRO3102Q9H379 93 aa1.2□□□□□ -2.22
SKP1-209ENST00000522552 CMC2Q9NRP2 79 aa1.2□□□□□ -2.22
SKP1-209ENST00000522552 PRH1P02810 166 aa1.2□□□□□ -2.22
SKP1-209ENST00000522552 BDP1A6H8Y1 2624 aa1.19□□□□□ -2.22
SKP1-209ENST00000522552 ABCC8Q09428 1581 aa1.19□□□□□ -2.22
SKP1-209ENST00000522552 H0YAA0 97 aa1.19□□□□□ -2.22
SKP1-209ENST00000522552 LINC00158P58513 81 aa1.19□□□□□ -2.22
SKP1-209ENST00000522552 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
SKP1-209ENST00000522552 CSMD3Q7Z407 3707 aa1.18□□□□□ -2.22
SKP1-209ENST00000522552 PLNP26678 52 aa1.18□□□□□ -2.22
SKP1-209ENST00000522552 TOGARAM1Q9Y4F4 1720 aa1.18□□□□□ -2.22
SKP1-209ENST00000522552 LOC730098B7Z3J9 87 aa1.17□□□□□ -2.22
SKP1-209ENST00000522552 CELSR2Q9HCU4 2923 aa1.17□□□□□ -2.22
SKP1-209ENST00000522552 TOP2AP11388 1531 aaKnown RBP1.17□□□□□ -2.22
SKP1-209ENST00000522552 WNK2Q9Y3S1 2297 aa1.17□□□□□ -2.22
SKP1-209ENST00000522552 KLK9Q2XQG4 91 aa1.16□□□□□ -2.22
SKP1-209ENST00000522552 WFDC13Q8IUB5 93 aa1.16□□□□□ -2.22
SKP1-209ENST00000522552 AKAP6Q13023 2319 aa1.16□□□□□ -2.22
SKP1-209ENST00000522552 TOMM5Q8N4H5 51 aa1.16□□□□□ -2.22
SKP1-209ENST00000522552 PIEZO1Q92508 2521 aa1.15□□□□□ -2.22
SKP1-209ENST00000522552 LYNX1G3V0Z9 82 aa1.15□□□□□ -2.23
SKP1-209ENST00000522552 DEPDC5O75140 1603 aa1.14□□□□□ -2.23
SKP1-209ENST00000522552 TRANK1O15050 2925 aa1.13□□□□□ -2.23
SKP1-209ENST00000522552 GPR98Q8WXG9 6306 aa1.13□□□□□ -2.23
SKP1-209ENST00000522552 IQGAP2Q13576 1575 aa1.13□□□□□ -2.23
SKP1-209ENST00000522552 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
SKP1-209ENST00000522552 H0YGX0 51 aa1.13□□□□□ -2.23
SKP1-209ENST00000522552 ABRACLQ9P1F3 81 aa1.13□□□□□ -2.23
SKP1-209ENST00000522552 DSPP15924 2871 aaKnown RBP1.12□□□□□ -2.23
SKP1-209ENST00000522552 PDE4DIPQ5VU43 2346 aa1.12□□□□□ -2.23
SKP1-209ENST00000522552 KIAA0586Q9BVV6 1533 aa1.12□□□□□ -2.23
SKP1-209ENST00000522552 SMIM27A0A1W2PRY6 76 aa1.12□□□□□ -2.23
SKP1-209ENST00000522552 ATRQ13535 2644 aa1.1□□□□□ -2.23
SKP1-209ENST00000522552 MINOS1Q5TGZ0 78 aa1.1□□□□□ -2.23
SKP1-209ENST00000522552 APCP25054 2843 aa1.09□□□□□ -2.23
SKP1-209ENST00000522552 TPRP12270 2363 aaKnown RBP1.09□□□□□ -2.23
SKP1-209ENST00000522552 CHD6Q8TD26 2715 aa1.09□□□□□ -2.23
SKP1-209ENST00000522552 SPTA1P02549 2419 aa1.09□□□□□ -2.24
SKP1-209ENST00000522552 CDC42BPAQ5VT25 1732 aa1.09□□□□□ -2.24
SKP1-209ENST00000522552 LINC01546A6NGU7 62 aa1.08□□□□□ -2.24
SKP1-209ENST00000522552 SPINK4O60575 86 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms