RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 SOSTDC1Q6X4U4 206 aa10.45□□□□□ -0.74
TOP1MT-216ENST00000522121 HINT1P49773 126 aaPredicted RBP10.44□□□□□ -0.74
TOP1MT-216ENST00000522121 RPS29P62273 56 aaKnown RBP10.44□□□□□ -0.74
TOP1MT-216ENST00000522121 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
TOP1MT-216ENST00000522121 KRTAP13-3Q3SY46 172 aa10.42□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 SPANXCQ9NY87 97 aa10.41□□□□□ -0.74
TOP1MT-216ENST00000522121 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
TOP1MT-216ENST00000522121 TIMM17BO60830 172 aa10.4□□□□□ -0.74
TOP1MT-216ENST00000522121 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.74
TOP1MT-216ENST00000522121 OR13C6PQ8NH95 151 aa10.4□□□□□ -0.74
TOP1MT-216ENST00000522121 LINC00308Q8TCZ7 52 aa10.4□□□□□ -0.74
TOP1MT-216ENST00000522121 SLC25A20O43772 301 aa10.39□□□□□ -0.75
TOP1MT-216ENST00000522121 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
TOP1MT-216ENST00000522121 PET117Q6UWS5 81 aa10.39□□□□□ -0.75
TOP1MT-216ENST00000522121 Q8N377 158 aa10.39□□□□□ -0.75
TOP1MT-216ENST00000522121 LITAFQ99732 161 aa10.38□□□□□ -0.75
TOP1MT-216ENST00000522121 ZNF815PA8K554 130 aa10.37□□□□□ -0.75
TOP1MT-216ENST00000522121 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
TOP1MT-216ENST00000522121 ST20-AS1Q8NBB2 130 aa10.37□□□□□ -0.75
TOP1MT-216ENST00000522121 MUC17Q685J3 4493 aa10.36□□□□□ -0.75
TOP1MT-216ENST00000522121 FAT4Q6V0I7 4981 aa10.35□□□□□ -0.75
TOP1MT-216ENST00000522121 SPANXDQ9BXN6 97 aa10.35□□□□□ -0.75
TOP1MT-216ENST00000522121 DHRS4-AS1Q9P1J3 65 aa10.35□□□□□ -0.75
TOP1MT-216ENST00000522121 ASB16-AS1Q495Z4 193 aa10.34□□□□□ -0.75
TOP1MT-216ENST00000522121 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
TOP1MT-216ENST00000522121 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
TOP1MT-216ENST00000522121 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
TOP1MT-216ENST00000522121 C3orf79P0CE67 100 aa10.31□□□□□ -0.76
TOP1MT-216ENST00000522121 TTTY13Q9BZ97 58 aa10.31□□□□□ -0.76
TOP1MT-216ENST00000522121 SPRR1BP22528 89 aa10.3□□□□□ -0.76
TOP1MT-216ENST00000522121 COX7BP24311 80 aa10.29□□□□□ -0.76
TOP1MT-216ENST00000522121 KRTDAPP60985 99 aa10.29□□□□□ -0.76
TOP1MT-216ENST00000522121 LAMTOR3Q9UHA4 124 aa10.29□□□□□ -0.76
TOP1MT-216ENST00000522121 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
TOP1MT-216ENST00000522121 COPS9Q8WXC6 57 aa10.28□□□□□ -0.76
TOP1MT-216ENST00000522121 C20orf202A1L168 122 aa10.27□□□□□ -0.77
TOP1MT-216ENST00000522121 ELOF1P60002 83 aaKnown RBP10.27□□□□□ -0.77
TOP1MT-216ENST00000522121 C6orf99Q4VX62 202 aa10.27□□□□□ -0.77
TOP1MT-216ENST00000522121 COA6Q5JTJ3 125 aaKnown RBP10.26□□□□□ -0.77
TOP1MT-216ENST00000522121 LIMD2Q9BT23 127 aa10.26□□□□□ -0.77
TOP1MT-216ENST00000522121 KRTAP9-2Q9BYQ4 174 aa10.26□□□□□ -0.77
TOP1MT-216ENST00000522121 TAL2Q16559 108 aa10.25□□□□□ -0.77
TOP1MT-216ENST00000522121 XP32Q5T750 250 aa10.23□□□□□ -0.77
TOP1MT-216ENST00000522121 HRCT1Q6UXD1 115 aa10.23□□□□□ -0.77
TOP1MT-216ENST00000522121 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
TOP1MT-216ENST00000522121 IFITM1P13164 125 aa10.22□□□□□ -0.77
TOP1MT-216ENST00000522121 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
TOP1MT-216ENST00000522121 AKR1D1P51857 326 aa10.21□□□□□ -0.77
TOP1MT-216ENST00000522121 Q6ZVH6 145 aa10.21□□□□□ -0.77
TOP1MT-216ENST00000522121 TEX49A0A1B0GTD5 131 aa10.2□□□□□ -0.78
TOP1MT-216ENST00000522121 A6NDN8 102 aa10.2□□□□□ -0.78
TOP1MT-216ENST00000522121 Q1RN00 199 aa10.2□□□□□ -0.78
TOP1MT-216ENST00000522121 A0A1B0GWB2 263 aa10.19□□□□□ -0.78
TOP1MT-216ENST00000522121 LINC01547P58512 204 aaPredicted RBP10.19□□□□□ -0.78
TOP1MT-216ENST00000522121 ANKRD39Q53RE8 183 aa10.19□□□□□ -0.78
TOP1MT-216ENST00000522121 PRO1933Q9H354 126 aa10.19□□□□□ -0.78
TOP1MT-216ENST00000522121 ATOH7Q8N100 152 aa10.18□□□□□ -0.78
TOP1MT-216ENST00000522121 KRTAP4-1Q9BYQ7 146 aa10.18□□□□□ -0.78
TOP1MT-216ENST00000522121 CD164Q04900 197 aa10.17□□□□□ -0.78
TOP1MT-216ENST00000522121 MUSTN1Q8IVN3 82 aa10.16□□□□□ -0.78
TOP1MT-216ENST00000522121 A4D1N5 150 aa10.14□□□□□ -0.79
TOP1MT-216ENST00000522121 H7C2G1 150 aa10.14□□□□□ -0.79
TOP1MT-216ENST00000522121 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
TOP1MT-216ENST00000522121 TRAV13-2A0A0B4J235 113 aa10.13□□□□□ -0.79
TOP1MT-216ENST00000522121 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
TOP1MT-216ENST00000522121 NHP2Q9NX24 153 aaKnown RBP10.12□□□□□ -0.79
TOP1MT-216ENST00000522121 IGLV5-48A0A075B6I7 105 aa10.11□□□□□ -0.79
TOP1MT-216ENST00000522121 SMIM29Q86T20 159 aa10.11□□□□□ -0.79
TOP1MT-216ENST00000522121 C9orf92A6NGG3 77 aa10.1□□□□□ -0.79
TOP1MT-216ENST00000522121 Q5XG85 94 aa10.08□□□□□ -0.8
TOP1MT-216ENST00000522121 SMIM11BQ8TCY0 68 aa10.08□□□□□ -0.8
TOP1MT-216ENST00000522121 VAMP3Q15836 100 aa10.06□□□□□ -0.8
TOP1MT-216ENST00000522121 HSBP1L1C9JCN9 74 aa10.05□□□□□ -0.8
TOP1MT-216ENST00000522121 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
TOP1MT-216ENST00000522121 S100A2P29034 98 aa10.04□□□□□ -0.8
TOP1MT-216ENST00000522121 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
TOP1MT-216ENST00000522121 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
TOP1MT-216ENST00000522121 A0A0G2JQZ4 141 aa10.02□□□□□ -0.81
TOP1MT-216ENST00000522121 F8WEM9 126 aa10.02□□□□□ -0.81
TOP1MT-216ENST00000522121 HIST3H2BBQ8N257 126 aa10.01□□□□□ -0.81
TOP1MT-216ENST00000522121 HIST1H2BLQ99880 126 aa10.01□□□□□ -0.81
TOP1MT-216ENST00000522121 TCL1BO95988 128 aa10□□□□□ -0.81
TOP1MT-216ENST00000522121 LINC00575Q6W349 94 aa9.99□□□□□ -0.81
TOP1MT-216ENST00000522121 hADV29S1A0JD25 119 aa9.97□□□□□ -0.81
TOP1MT-216ENST00000522121 KRTAP9-6A0A140TA67 174 aa9.96□□□□□ -0.82
TOP1MT-216ENST00000522121 S100A6P06703 90 aa9.95□□□□□ -0.82
TOP1MT-216ENST00000522121 LCE2CQ5TA81 110 aa9.95□□□□□ -0.82
TOP1MT-216ENST00000522121 Q6ZQY7 126 aa9.95□□□□□ -0.82
TOP1MT-216ENST00000522121 Q6JHZ5 121 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms