RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ZNF73O43830 326 aaPredicted RBP13.36□□□□□ -0.27
R3HCC1-208ENST00000522012 SCGB1C2P0DMR2 95 aa13.36□□□□□ -0.27
R3HCC1-208ENST00000522012 PRYO14603 147 aa13.35□□□□□ -0.27
R3HCC1-208ENST00000522012 KRTAP11-1Q8IUC1 163 aa13.35□□□□□ -0.27
R3HCC1-208ENST00000522012 COX6CP09669 75 aa13.34□□□□□ -0.27
R3HCC1-208ENST00000522012 DIRC1Q969H9 104 aa13.34□□□□□ -0.27
R3HCC1-208ENST00000522012 A0A1W2PPM0 123 aa13.34□□□□□ -0.27
R3HCC1-208ENST00000522012 REG3GQ6UW15 175 aa13.34□□□□□ -0.27
R3HCC1-208ENST00000522012 VAMP3Q15836 100 aa13.32□□□□□ -0.28
R3HCC1-208ENST00000522012 FABP2P12104 132 aa13.31□□□□□ -0.28
R3HCC1-208ENST00000522012 LYRM7Q5U5X0 104 aa13.29□□□□□ -0.28
R3HCC1-208ENST00000522012 SPRR1AP35321 89 aa13.29□□□□□ -0.28
R3HCC1-208ENST00000522012 ETDCA0A1B0GVM5 59 aa13.28□□□□□ -0.28
R3HCC1-208ENST00000522012 H0YGX0 51 aa13.28□□□□□ -0.28
R3HCC1-208ENST00000522012 COX7BP24311 80 aa13.28□□□□□ -0.28
R3HCC1-208ENST00000522012 CLEC2BQ92478 149 aa13.28□□□□□ -0.28
R3HCC1-208ENST00000522012 TRBV7-6A0A0J9YX20 115 aa13.26□□□□□ -0.29
R3HCC1-208ENST00000522012 XGP55808 180 aa13.26□□□□□ -0.29
R3HCC1-208ENST00000522012 A0A1B0GV90 55 aa13.25□□□□□ -0.29
R3HCC1-208ENST00000522012 DNAH8Q96JB1 4490 aa13.24□□□□□ -0.29
R3HCC1-208ENST00000522012 KIAA1109Q2LD37 5005 aa13.24□□□□□ -0.29
R3HCC1-208ENST00000522012 KRTAP4-16G5E9R7 235 aaPredicted RBP13.24□□□□□ -0.29
R3HCC1-208ENST00000522012 ELOF1P60002 83 aaKnown RBP13.24□□□□□ -0.29
R3HCC1-208ENST00000522012 FAM19A1Q7Z5A9 133 aa13.24□□□□□ -0.29
R3HCC1-208ENST00000522012 PSORS1C2Q9UIG4 136 aa13.24□□□□□ -0.29
R3HCC1-208ENST00000522012 B5MCH6 92 aa13.23□□□□□ -0.29
R3HCC1-208ENST00000522012 SPCS1Q9Y6A9 102 aa13.23□□□□□ -0.29
R3HCC1-208ENST00000522012 PCLOQ9Y6V0 5065 aa13.23□□□□□ -0.29
R3HCC1-208ENST00000522012 TCL1BO95988 128 aa13.23□□□□□ -0.29
R3HCC1-208ENST00000522012 FAM218AQ96MZ4 157 aa13.23□□□□□ -0.29
R3HCC1-208ENST00000522012 PKHD1P08F94 4074 aa13.22□□□□□ -0.29
R3HCC1-208ENST00000522012 BCE1O60756 84 aa13.22□□□□□ -0.29
R3HCC1-208ENST00000522012 DYNC1H1Q14204 4646 aaKnown RBP13.22□□□□□ -0.29
R3HCC1-208ENST00000522012 TRBV20-1A0A075B6N2 111 aa13.21□□□□□ -0.29
R3HCC1-208ENST00000522012 LRP1BQ9NZR2 4599 aa13.2□□□□□ -0.3
R3HCC1-208ENST00000522012 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
R3HCC1-208ENST00000522012 LINC00575Q6W349 94 aa13.2□□□□□ -0.3
R3HCC1-208ENST00000522012 Q6ZRX8 168 aa13.2□□□□□ -0.3
R3HCC1-208ENST00000522012 LINC00528Q8N1L1 170 aa13.2□□□□□ -0.3
R3HCC1-208ENST00000522012 PRLHP81277 87 aa13.19□□□□□ -0.3
R3HCC1-208ENST00000522012 ATXN8Q156A1 80 aa13.19□□□□□ -0.3
R3HCC1-208ENST00000522012 UBE2AP49459 152 aa13.18□□□□□ -0.3
R3HCC1-208ENST00000522012 K7EP34 96 aa13.18□□□□□ -0.3
R3HCC1-208ENST00000522012 LST1O00453 97 aa13.18□□□□□ -0.3
R3HCC1-208ENST00000522012 SLC25A20O43772 301 aa13.18□□□□□ -0.3
R3HCC1-208ENST00000522012 hADV29S1A0JD25 119 aa13.16□□□□□ -0.3
R3HCC1-208ENST00000522012 SNCGO76070 127 aa13.16□□□□□ -0.3
R3HCC1-208ENST00000522012 SMR3BP02814 79 aaPredicted RBP13.16□□□□□ -0.3
R3HCC1-208ENST00000522012 GTF2H5Q6ZYL4 71 aa13.15□□□□□ -0.3
R3HCC1-208ENST00000522012 Q9BRP9 147 aa13.15□□□□□ -0.3
R3HCC1-208ENST00000522012 H3BMG7 143 aa13.14□□□□□ -0.31
R3HCC1-208ENST00000522012 INAFM2P0DMQ5 153 aa13.14□□□□□ -0.31
R3HCC1-208ENST00000522012 DHRS4-AS1Q9P1J3 65 aa13.14□□□□□ -0.31
R3HCC1-208ENST00000522012 A0A1B0GX51 115 aa13.13□□□□□ -0.31
R3HCC1-208ENST00000522012 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
R3HCC1-208ENST00000522012 H0Y9J4 135 aa13.12□□□□□ -0.31
R3HCC1-208ENST00000522012 TRACP01848 142 aa13.12□□□□□ -0.31
R3HCC1-208ENST00000522012 CDK2AP2O75956 126 aa13.11□□□□□ -0.31
R3HCC1-208ENST00000522012 DNAL4O96015 105 aa13.11□□□□□ -0.31
R3HCC1-208ENST00000522012 IGLV7-43P04211 117 aa13.1□□□□□ -0.31
R3HCC1-208ENST00000522012 KRTAP13-1Q8IUC0 172 aa13.1□□□□□ -0.31
R3HCC1-208ENST00000522012 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
R3HCC1-208ENST00000522012 ERC2-IT1O76042 136 aa13.08□□□□□ -0.31
R3HCC1-208ENST00000522012 RPL37AP61513 92 aaKnown RBP13.08□□□□□ -0.31
R3HCC1-208ENST00000522012 C9JAW5 83 aa13.07□□□□□ -0.32
R3HCC1-208ENST00000522012 ZNF861PO60384 105 aa13.07□□□□□ -0.32
R3HCC1-208ENST00000522012 Q6ZQY7 126 aa13.06□□□□□ -0.32
R3HCC1-208ENST00000522012 UBE2V1Q13404 147 aa13.05□□□□□ -0.32
R3HCC1-208ENST00000522012 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
R3HCC1-208ENST00000522012 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.04□□□□□ -0.32
R3HCC1-208ENST00000522012 RYR1P21817 5038 aa13.04□□□□□ -0.32
R3HCC1-208ENST00000522012 APOBP04114 4563 aaKnown RBP13.03□□□□□ -0.32
R3HCC1-208ENST00000522012 ST20-AS1Q8NBB2 130 aa13.03□□□□□ -0.32
R3HCC1-208ENST00000522012 ORMDL1Q9P0S3 153 aa13.02□□□□□ -0.33
R3HCC1-208ENST00000522012 DEFB105AQ8NG35 78 aa13.01□□□□□ -0.33
R3HCC1-208ENST00000522012 BAALC-AS2P0C853 105 aa13□□□□□ -0.33
R3HCC1-208ENST00000522012 FAM229AH3BQW9 127 aa12.98□□□□□ -0.33
R3HCC1-208ENST00000522012 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
R3HCC1-208ENST00000522012 PRO0461Q9UI25 63 aa12.97□□□□□ -0.33
R3HCC1-208ENST00000522012 GHRHP01286 108 aa12.95□□□□□ -0.34
R3HCC1-208ENST00000522012 F8W1H4 67 aa12.94□□□□□ -0.34
R3HCC1-208ENST00000522012 H3BT86 120 aa12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 TMEM256-PLSCR3K7ERE1 68 aa12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 PLA2G1BP04054 148 aaKnown RBP12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 SMCPP49901 116 aaPredicted RBP12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 LINC01547P58512 204 aaPredicted RBP12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 GAGE2AQ6NT46 116 aa12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 ANKRD29Q8N6D5 301 aa12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 IGLV5-48A0A075B6I7 105 aa12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 H3BQ85 93 aa12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 Q8N377 158 aa12.93□□□□□ -0.34
R3HCC1-208ENST00000522012 ABCA13Q86UQ4 5058 aa12.92□□□□□ -0.34
R3HCC1-208ENST00000522012 TEX49A0A1B0GTD5 131 aa12.92□□□□□ -0.34
R3HCC1-208ENST00000522012 KRTAP10-4P60372 401 aaPredicted RBP12.92□□□□□ -0.34
R3HCC1-208ENST00000522012 ZNF706Q9Y5V0 76 aaPredicted RBP12.92□□□□□ -0.34
R3HCC1-208ENST00000522012 SPRR4Q96PI1 79 aa12.91□□□□□ -0.34
R3HCC1-208ENST00000522012 Q5VSD8 79 aa12.9□□□□□ -0.34
R3HCC1-208ENST00000522012 KRTAP4-5Q9BYR2 181 aa12.9□□□□□ -0.34
R3HCC1-208ENST00000522012 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
R3HCC1-208ENST00000522012 PPDPFLQ8WWR9 84 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms