RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 LINC00612Q8N6U2 182 aa11.73□□□□□ -0.53
TRAM1-205ENST00000521425 TM2D3Q9BRN9 247 aa11.72□□□□□ -0.53
TRAM1-205ENST00000521425 Q6ZRU5 148 aa11.72□□□□□ -0.53
TRAM1-205ENST00000521425 C6orf48Q9UBA6 75 aa11.72□□□□□ -0.53
TRAM1-205ENST00000521425 COL7A1Q02388 2944 aa11.71□□□□□ -0.53
TRAM1-205ENST00000521425 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.53
TRAM1-205ENST00000521425 M0R2N4 97 aa11.71□□□□□ -0.54
TRAM1-205ENST00000521425 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
TRAM1-205ENST00000521425 Q8N814 137 aa11.68□□□□□ -0.54
TRAM1-205ENST00000521425 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
TRAM1-205ENST00000521425 JMJD7-PLA2G4BH0Y9G9 81 aa11.66□□□□□ -0.54
TRAM1-205ENST00000521425 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
TRAM1-205ENST00000521425 ATP5EP2Q5VTU8 51 aa11.65□□□□□ -0.54
TRAM1-205ENST00000521425 LINC01547P58512 204 aaPredicted RBP11.65□□□□□ -0.54
TRAM1-205ENST00000521425 Q8N9L7 120 aa11.65□□□□□ -0.54
TRAM1-205ENST00000521425 OBSCN-AS1Q96MR7 158 aa11.65□□□□□ -0.54
TRAM1-205ENST00000521425 TGP01266 2768 aa11.63□□□□□ -0.55
TRAM1-205ENST00000521425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.62□□□□□ -0.55
TRAM1-205ENST00000521425 TMEM256-PLSCR3K7ERE1 68 aa11.62□□□□□ -0.55
TRAM1-205ENST00000521425 KLKP1Q107X0 134 aa11.62□□□□□ -0.55
TRAM1-205ENST00000521425 FAM168BA1KXE4 195 aa11.61□□□□□ -0.55
TRAM1-205ENST00000521425 PMAIP1Q13794 54 aa11.61□□□□□ -0.55
TRAM1-205ENST00000521425 PSPHP1O15172 72 aa11.61□□□□□ -0.55
TRAM1-205ENST00000521425 Q6ZVQ6 151 aa11.61□□□□□ -0.55
TRAM1-205ENST00000521425 FUSP35637 526 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAM1-205ENST00000521425 NKAPP1Q8N9T2 125 aa11.59□□□□□ -0.55
TRAM1-205ENST00000521425 PRR4Q16378 134 aa11.59□□□□□ -0.55
TRAM1-205ENST00000521425 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
TRAM1-205ENST00000521425 C3orf84H3BNL1 204 aa11.58□□□□□ -0.56
TRAM1-205ENST00000521425 Q6ZRP5 223 aa11.58□□□□□ -0.56
TRAM1-205ENST00000521425 NREPQ16612 68 aa11.58□□□□□ -0.56
TRAM1-205ENST00000521425 TMEM254Q8TBM7 123 aa11.58□□□□□ -0.56
TRAM1-205ENST00000521425 DIRC1Q969H9 104 aa11.58□□□□□ -0.56
TRAM1-205ENST00000521425 ZNF73O43830 326 aaPredicted RBP11.56□□□□□ -0.56
TRAM1-205ENST00000521425 PSCAO43653 123 aa11.56□□□□□ -0.56
TRAM1-205ENST00000521425 SYCNQ0VAF6 134 aa11.56□□□□□ -0.56
TRAM1-205ENST00000521425 UBE2DNLQ8IWF7 75 aa11.54□□□□□ -0.56
TRAM1-205ENST00000521425 PRR34Q9NV39 138 aa11.54□□□□□ -0.56
TRAM1-205ENST00000521425 A0A0G2JQZ4 141 aa11.54□□□□□ -0.56
TRAM1-205ENST00000521425 A0A1W2PNN7 141 aa11.54□□□□□ -0.56
TRAM1-205ENST00000521425 LINC00575Q6W349 94 aa11.53□□□□□ -0.56
TRAM1-205ENST00000521425 C15orf56Q8N910 161 aa11.53□□□□□ -0.56
TRAM1-205ENST00000521425 COX7BP24311 80 aa11.53□□□□□ -0.56
TRAM1-205ENST00000521425 COX17Q14061 63 aa11.53□□□□□ -0.56
TRAM1-205ENST00000521425 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.57
TRAM1-205ENST00000521425 LYSTQ99698 3801 aa11.52□□□□□ -0.57
TRAM1-205ENST00000521425 BPY2O14599 106 aa11.51□□□□□ -0.57
TRAM1-205ENST00000521425 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
TRAM1-205ENST00000521425 HIGD2AQ9BW72 106 aa11.51□□□□□ -0.57
TRAM1-205ENST00000521425 A0A096LNI7 61 aa11.51□□□□□ -0.57
TRAM1-205ENST00000521425 Q6ZQT0 140 aa11.5□□□□□ -0.57
TRAM1-205ENST00000521425 NDUFC1O43677 76 aa11.48□□□□□ -0.57
TRAM1-205ENST00000521425 K7EIL1 84 aa11.47□□□□□ -0.57
TRAM1-205ENST00000521425 UBE2BP63146 152 aa11.47□□□□□ -0.57
TRAM1-205ENST00000521425 PRYO14603 147 aa11.46□□□□□ -0.57
TRAM1-205ENST00000521425 TRBV7-4A0A0J9YYF1 115 aa11.45□□□□□ -0.58
TRAM1-205ENST00000521425 VPREB1P12018 145 aa11.43□□□□□ -0.58
TRAM1-205ENST00000521425 ST20-AS1Q8NBB2 130 aa11.43□□□□□ -0.58
TRAM1-205ENST00000521425 FAM30AQ9NZY2 134 aa11.43□□□□□ -0.58
TRAM1-205ENST00000521425 SPTSSBQ8NFR3 76 aa11.42□□□□□ -0.58
TRAM1-205ENST00000521425 IGLV6-57P01721 117 aa11.41□□□□□ -0.58
TRAM1-205ENST00000521425 ATP5EP56381 51 aaPredicted RBP11.41□□□□□ -0.58
TRAM1-205ENST00000521425 EGFEM1PQ0D2K5 195 aa11.41□□□□□ -0.58
TRAM1-205ENST00000521425 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
TRAM1-205ENST00000521425 A8MU10 97 aa11.41□□□□□ -0.58
TRAM1-205ENST00000521425 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
TRAM1-205ENST00000521425 MDFIQ99750 246 aa11.41□□□□□ -0.58
TRAM1-205ENST00000521425 DEFB116Q30KQ4 102 aa11.41□□□□□ -0.58
TRAM1-205ENST00000521425 ETDCA0A1B0GVM5 59 aa11.4□□□□□ -0.58
TRAM1-205ENST00000521425 M0R378 163 aa11.39□□□□□ -0.59
TRAM1-205ENST00000521425 MUC7Q8TAX7 377 aa11.39□□□□□ -0.59
TRAM1-205ENST00000521425 LINC01556Q5JQF7 62 aa11.38□□□□□ -0.59
TRAM1-205ENST00000521425 PRLHP81277 87 aa11.37□□□□□ -0.59
TRAM1-205ENST00000521425 MRPL55Q7Z7F7 128 aaKnown RBP11.36□□□□□ -0.59
TRAM1-205ENST00000521425 KRTAP26-1Q6PEX3 210 aa11.35□□□□□ -0.59
TRAM1-205ENST00000521425 BCE1O60756 84 aa11.34□□□□□ -0.59
TRAM1-205ENST00000521425 CXCL6P80162 114 aa11.34□□□□□ -0.59
TRAM1-205ENST00000521425 LINC00167Q96N53 147 aa11.33□□□□□ -0.6
TRAM1-205ENST00000521425 KRTAP1-5Q9BYS1 174 aa11.33□□□□□ -0.6
TRAM1-205ENST00000521425 A8MUN3 132 aa11.32□□□□□ -0.6
TRAM1-205ENST00000521425 DNAH10Q8IVF4 4471 aa11.31□□□□□ -0.6
TRAM1-205ENST00000521425 DNAH10OSP0CZ25 163 aa11.31□□□□□ -0.6
TRAM1-205ENST00000521425 ERC2-IT1O76042 136 aa11.31□□□□□ -0.6
TRAM1-205ENST00000521425 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
TRAM1-205ENST00000521425 C1orf64Q8NEQ6 169 aa11.3□□□□□ -0.6
TRAM1-205ENST00000521425 ELOF1P60002 83 aaKnown RBP11.3□□□□□ -0.6
TRAM1-205ENST00000521425 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
TRAM1-205ENST00000521425 TRAV22A0A0B4J277 110 aa11.27□□□□□ -0.61
TRAM1-205ENST00000521425 SMIM29Q86T20 159 aa11.26□□□□□ -0.61
TRAM1-205ENST00000521425 CD164Q04900 197 aa11.25□□□□□ -0.61
TRAM1-205ENST00000521425 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
TRAM1-205ENST00000521425 LINC00528Q8N1L1 170 aa11.24□□□□□ -0.61
TRAM1-205ENST00000521425 hDV103S1A0JD37 113 aa11.24□□□□□ -0.61
TRAM1-205ENST00000521425 CHKB-CPT1BH3BT56 60 aa11.24□□□□□ -0.61
TRAM1-205ENST00000521425 H3BNG1 76 aa11.23□□□□□ -0.61
TRAM1-205ENST00000521425 OCR1Q9BZK8 76 aa11.22□□□□□ -0.61
TRAM1-205ENST00000521425 IGKV4-1P06312 121 aa11.22□□□□□ -0.61
TRAM1-205ENST00000521425 PHF5AQ7RTV0 110 aaKnown RBP11.22□□□□□ -0.61
TRAM1-205ENST00000521425 PDE6GP18545 87 aa11.21□□□□□ -0.61
TRAM1-205ENST00000521425 Q8N377 158 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms