RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 Q6ZRP5 223 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 C14orf178Q8N769 122 aaPredicted RBP3.04□□□□□ -1.92
SDCBP-207ENST00000520168 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 HIST1H4GQ99525 98 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 LINC00474Q9P2X8 69 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 TRAV12-1A0A0B4J245 112 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 TRBV27A0A0K0K1C4 114 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 H3BUT2 72 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 ATOX1O00244 68 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 PSPHP1O15172 72 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 ANGP03950 147 aaKnown RBP3.03□□□□□ -1.92
SDCBP-207ENST00000520168 MGPP08493 103 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 COX8AP10176 69 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 PLNP26678 52 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 POLR2KP53803 58 aaKnown RBP3.03□□□□□ -1.92
SDCBP-207ENST00000520168 MPV17L2Q567V2 206 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 PAPPA-AS1Q5QFB9 102 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 TEN1Q86WV5 123 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 SCGB3A1Q96QR1 104 aa3.03□□□□□ -1.92
SDCBP-207ENST00000520168 IGLV10-54A0A075B6I4 117 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 TRBV10-1A0A0K0K1A3 114 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 TRBV7-7A0A0K0K1E9 115 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 M0QY20 66 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 IGKCP01834 107 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 SMIM13P0DJ93 91 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 RPL36AP83881 106 aaKnown RBP3.02□□□□□ -1.93
SDCBP-207ENST00000520168 RPL36ALQ969Q0 106 aaKnown RBP3.02□□□□□ -1.93
SDCBP-207ENST00000520168 TMEM141Q96I45 108 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
SDCBP-207ENST00000520168 TRBV7-3A0A075B6L6 115 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 TRBV6-8A0A0A6YYG3 113 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 I3L3M4 83 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 CHTF8P0CG12 524 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 CXCL6P80162 114 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 ZNF56Q15929 161 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 PRR4Q16378 134 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 ETDBQ3ZM63 59 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 SUMO4Q6EEV6 95 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 C2orf66Q6UXQ4 117 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 LCA10Q71F78 164 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 RPL39LQ96EH5 51 aaKnown RBP3.01□□□□□ -1.93
SDCBP-207ENST00000520168 TIMM17AQ99595 171 aa3.01□□□□□ -1.93
SDCBP-207ENST00000520168 SDHAF1A6NFY7 115 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 IGIPA6NJ69 53 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 F8VRH5 84 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 UBE2D3P61077 147 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 UBE2D2P62837 147 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 UBE2BP63146 152 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 COX6A2Q02221 97 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 FAM74A4Q5TZK3 123 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 NEXN-AS1Q8NBZ9 246 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 HIGD1BQ9P298 99 aa3□□□□□ -1.93
SDCBP-207ENST00000520168 IGLV1-50A0A075B6I6 118 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 IGKV2-24A0A0C4DH68 120 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 COX7A2LO14548 114 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 ACYP1P07311 99 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 HERVK_113P61574 105 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 ZC2HC1BQ5TFG8 222 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 LINC00269Q8N2A0 174 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 CHCHD5Q9BSY4 110 aa2.99□□□□□ -1.93
SDCBP-207ENST00000520168 MRPL35Q9NZE8 188 aaKnown RBP2.99□□□□□ -1.93
SDCBP-207ENST00000520168 A0A1B0GW54 56 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 M0R378 163 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 LST1O00453 97 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 ZNF73O43830 326 aaPredicted RBP2.98□□□□□ -1.93
SDCBP-207ENST00000520168 TSHBP01222 138 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 REG3AQ06141 175 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 C6orf99Q4VX62 202 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 LINC00242Q5T6M2 205 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 PHF5AQ7RTV0 110 aaKnown RBP2.98□□□□□ -1.93
SDCBP-207ENST00000520168 NKAPP1Q8N9T2 125 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 C20orf203Q8NBC4 194 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 DIRC1Q969H9 104 aa2.98□□□□□ -1.93
SDCBP-207ENST00000520168 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 TRBV25-1A0A075B6N4 114 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 MYMXA0A1B0GTQ4 84 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 A8MUN3 132 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 TMEM256-PLSCR3K7ERE1 68 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 CLPSL2Q6UWE3 100 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 C2orf91Q6ZV80 131 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 FAM19A3Q7Z5A8 133 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 PCP2Q8IVA1 136 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 CEND1Q8N111 149 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 TIMM21Q9BVV7 248 aa2.97□□□□□ -1.93
SDCBP-207ENST00000520168 A0A096LNI7 61 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 IGKV2D-26A0A0A0MRZ7 120 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 IGHV6-1A0A0B4J1U7 121 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 A0A1B0GUV1 79 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 C11orf86A6NJI1 115 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 NDUFC1O43677 76 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 UBE2D1P51668 147 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 RPL39P62891 51 aaKnown RBP2.96□□□□□ -1.94
SDCBP-207ENST00000520168 KIAA0087Q14695 138 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 AMELXQ99217 191 aa2.96□□□□□ -1.94
SDCBP-207ENST00000520168 IGLV4-69A0A075B6H9 119 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 IGLV4-3A0A075B6K6 122 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms