RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 LINC00336Q6ZUF6 198 aa5.53□□□□□ -1.52
CTNNA1-210ENST00000518825 DNAH9Q9NYC9 4486 aa5.53□□□□□ -1.52
CTNNA1-210ENST00000518825 GHRHP01286 108 aa5.53□□□□□ -1.52
CTNNA1-210ENST00000518825 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-210ENST00000518825 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
CTNNA1-210ENST00000518825 M0R378 163 aa5.53□□□□□ -1.52
CTNNA1-210ENST00000518825 TRBV7-6A0A0J9YX20 115 aa5.52□□□□□ -1.53
CTNNA1-210ENST00000518825 SERTAD4-AS1Q5TG53 156 aa5.52□□□□□ -1.53
CTNNA1-210ENST00000518825 LINC01556Q5JQF7 62 aa5.52□□□□□ -1.53
CTNNA1-210ENST00000518825 C1orf195Q5TG92 126 aa5.52□□□□□ -1.53
CTNNA1-210ENST00000518825 DNAH7Q8WXX0 4024 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 TRAV10A0A0B4J240 114 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 OXTP01178 125 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 CASC10Q5T4H9 136 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 IGKV2D-24A0A075B6R9 120 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 DEFB131BA0A096LNP1 70 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 HAMPP81172 84 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
CTNNA1-210ENST00000518825 KRTAP24-1Q3LI83 254 aa5.5□□□□□ -1.53
CTNNA1-210ENST00000518825 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
CTNNA1-210ENST00000518825 BAHCC1Q9P281 2608 aa5.5□□□□□ -1.53
CTNNA1-210ENST00000518825 COL7A1Q02388 2944 aa5.49□□□□□ -1.53
CTNNA1-210ENST00000518825 SCXQ7RTU7 201 aa5.49□□□□□ -1.53
CTNNA1-210ENST00000518825 DPH3Q96FX2 82 aa5.49□□□□□ -1.53
CTNNA1-210ENST00000518825 FAM168BA1KXE4 195 aa5.49□□□□□ -1.53
CTNNA1-210ENST00000518825 SYCNQ0VAF6 134 aa5.49□□□□□ -1.53
CTNNA1-210ENST00000518825 KCNQ1DNQ9H478 68 aa5.49□□□□□ -1.53
CTNNA1-210ENST00000518825 H3BQ85 93 aa5.48□□□□□ -1.53
CTNNA1-210ENST00000518825 PDE6GP18545 87 aa5.48□□□□□ -1.53
CTNNA1-210ENST00000518825 CXCL6P80162 114 aa5.48□□□□□ -1.53
CTNNA1-210ENST00000518825 C11orf45Q8TAV5 145 aa5.48□□□□□ -1.53
CTNNA1-210ENST00000518825 C7orf33Q8WU49 177 aa5.48□□□□□ -1.53
CTNNA1-210ENST00000518825 DNAH10OSP0CZ25 163 aa5.48□□□□□ -1.53
CTNNA1-210ENST00000518825 TMEM258P61165 79 aa5.47□□□□□ -1.53
CTNNA1-210ENST00000518825 Q8N377 158 aa5.47□□□□□ -1.53
CTNNA1-210ENST00000518825 KRTAP4-16G5E9R7 235 aaPredicted RBP5.47□□□□□ -1.53
CTNNA1-210ENST00000518825 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
CTNNA1-210ENST00000518825 LINC00588Q9Y4M8 146 aa5.47□□□□□ -1.53
CTNNA1-210ENST00000518825 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
CTNNA1-210ENST00000518825 Q9BRP9 147 aa5.46□□□□□ -1.54
CTNNA1-210ENST00000518825 COL6A5A8TX70 2615 aa5.46□□□□□ -1.54
CTNNA1-210ENST00000518825 PRB2P02812 416 aaPredicted RBP5.46□□□□□ -1.54
CTNNA1-210ENST00000518825 RPL37AP8A6NKH3 93 aa5.45□□□□□ -1.54
CTNNA1-210ENST00000518825 Q5XG85 94 aa5.45□□□□□ -1.54
CTNNA1-210ENST00000518825 Q8N9L7 120 aa5.45□□□□□ -1.54
CTNNA1-210ENST00000518825 TLX1NBP0CAT3 122 aa5.45□□□□□ -1.54
CTNNA1-210ENST00000518825 TRAV7A0A075B6U4 112 aa5.44□□□□□ -1.54
CTNNA1-210ENST00000518825 TM2D3Q9BRN9 247 aa5.44□□□□□ -1.54
CTNNA1-210ENST00000518825 DEFB105AQ8NG35 78 aa5.44□□□□□ -1.54
CTNNA1-210ENST00000518825 H7BZZ5 65 aa5.44□□□□□ -1.54
CTNNA1-210ENST00000518825 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 BCE1O60756 84 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 SRRM2Q9UQ35 2752 aaKnown RBP5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 IGLV5-48A0A075B6I7 105 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 SPRR1AP35321 89 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 NKAPP1Q8N9T2 125 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 Q6ZRX8 168 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 PLA2G2DQ9UNK4 145 aa5.43□□□□□ -1.54
CTNNA1-210ENST00000518825 C3orf84H3BNL1 204 aa5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 J3QL48 77 aa5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 IGKV4-1P06312 121 aa5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 TENM2Q9NT68 2774 aa5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 ERC2-IT1O76042 136 aa5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 TNP2Q05952 138 aa5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 DYNC2H1Q8NCM8 4307 aaKnown RBP5.42□□□□□ -1.54
CTNNA1-210ENST00000518825 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
CTNNA1-210ENST00000518825 BPY2O14599 106 aa5.41□□□□□ -1.54
CTNNA1-210ENST00000518825 KLKP1Q107X0 134 aa5.41□□□□□ -1.54
CTNNA1-210ENST00000518825 RMI2Q96E14 147 aa5.41□□□□□ -1.54
CTNNA1-210ENST00000518825 STAB2Q8WWQ8 2551 aa5.41□□□□□ -1.54
CTNNA1-210ENST00000518825 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
CTNNA1-210ENST00000518825 PLECQ15149 4684 aaKnown RBP5.41□□□□□ -1.54
CTNNA1-210ENST00000518825 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.55
CTNNA1-210ENST00000518825 KRTAP1-5Q9BYS1 174 aa5.39□□□□□ -1.55
CTNNA1-210ENST00000518825 EPM2AB3EWF7 344 aa5.38□□□□□ -1.55
CTNNA1-210ENST00000518825 NREPQ16612 68 aa5.38□□□□□ -1.55
CTNNA1-210ENST00000518825 MGAM2Q2M2H8 2515 aa5.38□□□□□ -1.55
CTNNA1-210ENST00000518825 PRYO14603 147 aa5.38□□□□□ -1.55
CTNNA1-210ENST00000518825 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
CTNNA1-210ENST00000518825 K7EIL1 84 aa5.37□□□□□ -1.55
CTNNA1-210ENST00000518825 MRPL55Q7Z7F7 128 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-210ENST00000518825 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
CTNNA1-210ENST00000518825 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
CTNNA1-210ENST00000518825 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
CTNNA1-210ENST00000518825 SMIM29Q86T20 159 aa5.37□□□□□ -1.55
CTNNA1-210ENST00000518825 F8WEM9 126 aa5.36□□□□□ -1.55
CTNNA1-210ENST00000518825 ETDCA0A1B0GVM5 59 aa5.36□□□□□ -1.55
CTNNA1-210ENST00000518825 C1orf137Q5JT78 98 aa5.35□□□□□ -1.55
CTNNA1-210ENST00000518825 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
CTNNA1-210ENST00000518825 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
CTNNA1-210ENST00000518825 A0A096LNI7 61 aa5.34□□□□□ -1.55
CTNNA1-210ENST00000518825 KRTAP11-1Q8IUC1 163 aa5.34□□□□□ -1.55
CTNNA1-210ENST00000518825 Q8NBF4 154 aa5.34□□□□□ -1.55
CTNNA1-210ENST00000518825 TMEM254Q8TBM7 123 aa5.34□□□□□ -1.55
CTNNA1-210ENST00000518825 DSCR10P59022 87 aa5.34□□□□□ -1.56
CTNNA1-210ENST00000518825 STARD9Q9P2P6 4700 aa5.33□□□□□ -1.56
CTNNA1-210ENST00000518825 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
CTNNA1-210ENST00000518825 UBE2BP63146 152 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms