RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 ATOX1O00244 68 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 LST1O00453 97 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 EIF4EBP3O60516 100 aaPredicted RBP3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 SLPIP03973 132 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 CRYGAP11844 174 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 POLR2KP53803 58 aaKnown RBP3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 HERVK_113P63121 156 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 RPL39LQ96EH5 51 aaKnown RBP3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 AMELXQ99217 191 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 JPT2Q9H910 190 aa3.66□□□□□ -1.82
LINCR-0001-202ENST00000518098 A0A096LNI7 61 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 IGHV1-58A0A0C4DH39 117 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 A0A0J9YXY3 114 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 FAM236AA0A1B0GUQ0 79 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 FAM236BA0A1B0GV22 79 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 H0Y9J4 135 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 H7C2G1 150 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 ZNF561-AS1K7EIQ3 104 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 TRIAP1O43715 76 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 TIMM17BO60830 172 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 TSHBP01222 138 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 TRACP01848 142 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 TMEM258P61165 79 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 GAGE2AQ6NT46 116 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 CLPSL2Q6UWE3 100 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 C15orf56Q8N910 161 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 C20orf203Q8NBC4 194 aa3.65□□□□□ -1.83
LINCR-0001-202ENST00000518098 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 ZNF22P17026 224 aaPredicted RBP3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 SYCNQ0VAF6 134 aa3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 C1orf137Q5JT78 98 aa3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 NTM-AS1Q6ZSK4 140 aa3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 C5orf38Q86SI9 138 aa3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 DAND5Q8N907 189 aa3.64□□□□□ -1.83
LINCR-0001-202ENST00000518098 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
LINCR-0001-202ENST00000518098 F8WDY8 70 aa3.63□□□□□ -1.83
LINCR-0001-202ENST00000518098 IGLV7-43P04211 117 aa3.63□□□□□ -1.83
LINCR-0001-202ENST00000518098 PRR26Q8N8Z3 221 aa3.63□□□□□ -1.83
LINCR-0001-202ENST00000518098 TIMM21Q9BVV7 248 aa3.63□□□□□ -1.83
LINCR-0001-202ENST00000518098 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
LINCR-0001-202ENST00000518098 PYGO1Q9Y3Y4 419 aa3.63□□□□□ -1.83
LINCR-0001-202ENST00000518098 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 NDUFC2-KCTD14E9PQ53 114 aa3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 I3L3M4 83 aa3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 COX7A2LO14548 114 aa3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 LINC01547P58512 204 aaPredicted RBP3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 HIST1H4AP62805 103 aaKnown RBP3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 HIGD2BQ4VC39 106 aa3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 SUMO4Q6EEV6 95 aa3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 CHCHD10Q8WYQ3 142 aaPredicted RBP3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
LINCR-0001-202ENST00000518098 IGLV4-60A0A075B6I1 120 aa3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 TINCRA0A1B0GVN0 87 aa3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 M0QY20 66 aa3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 PRSS2P07478 247 aa3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 RPL39P62891 51 aaKnown RBP3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 SS18Q15532 418 aa3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 C2orf48Q96LS8 159 aa3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 LITAFQ99732 161 aa3.61□□□□□ -1.83
LINCR-0001-202ENST00000518098 IGLV4-3A0A075B6K6 122 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 A0A087WZ39 114 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 MALP21145 153 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 C9orf116Q5BN46 136 aaPredicted RBP3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 S100A7L2Q5SY68 101 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 Q6JHZ5 121 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 SERP2Q8N6R1 65 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 CLEC2BQ92478 149 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 NDUFA12Q9UI09 145 aa3.6□□□□□ -1.83
LINCR-0001-202ENST00000518098 NDUFA1O15239 70 aa3.59□□□□□ -1.83
LINCR-0001-202ENST00000518098 BAALC-AS2P0C853 105 aa3.59□□□□□ -1.83
LINCR-0001-202ENST00000518098 CAMK2N2Q96S95 79 aa3.59□□□□□ -1.83
LINCR-0001-202ENST00000518098 NDUFC2O95298 119 aa3.58□□□□□ -1.84
LINCR-0001-202ENST00000518098 XCL1P47992 114 aa3.58□□□□□ -1.84
LINCR-0001-202ENST00000518098 SMCR5Q8TEV8 140 aa3.58□□□□□ -1.84
LINCR-0001-202ENST00000518098 TRAV13-1A0A0B4J241 112 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 IGKV3OR2-268A0A0C4DH90 116 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 LINC00959A0A1B0GUT2 108 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 A0A1W2PNN7 141 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 hADV29S1A0JD25 119 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 BCE1O60756 84 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 DNAL4O96015 105 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 ADAMTSL4-AS1Q5T5F5 129 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 ATP5EP2Q5VTU8 51 aa3.57□□□□□ -1.84
LINCR-0001-202ENST00000518098 IGLV5-45A0A087WSX0 123 aa3.56□□□□□ -1.84
LINCR-0001-202ENST00000518098 TRAV13-2A0A0B4J235 113 aa3.56□□□□□ -1.84
LINCR-0001-202ENST00000518098 H0YGX0 51 aa3.56□□□□□ -1.84
LINCR-0001-202ENST00000518098 ZNF861PO60384 105 aa3.56□□□□□ -1.84
LINCR-0001-202ENST00000518098 KRTAP1-4P0C5Y4 121 aa3.56□□□□□ -1.84
LINCR-0001-202ENST00000518098 TLX1NBP0CAT3 122 aa3.56□□□□□ -1.84
LINCR-0001-202ENST00000518098 UBE2BP63146 152 aa3.56□□□□□ -1.84
LINCR-0001-202ENST00000518098 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms