RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 TRAV23DV6A0A075B6W5 121 aa11.41□□□□□ -0.58
LMNA-225ENST00000515824 B5MCH6 92 aa11.41□□□□□ -0.58
LMNA-225ENST00000515824 KRTAP13-2Q52LG2 175 aa11.4□□□□□ -0.58
LMNA-225ENST00000515824 SPRR4Q96PI1 79 aa11.4□□□□□ -0.58
LMNA-225ENST00000515824 PCP2Q8IVA1 136 aa11.39□□□□□ -0.59
LMNA-225ENST00000515824 LINC00518Q8N0U6 118 aa11.39□□□□□ -0.59
LMNA-225ENST00000515824 OR13C6PQ8NH95 151 aa11.39□□□□□ -0.59
LMNA-225ENST00000515824 COPS9Q8WXC6 57 aa11.39□□□□□ -0.59
LMNA-225ENST00000515824 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
LMNA-225ENST00000515824 HSBP1L1C9JCN9 74 aa11.38□□□□□ -0.59
LMNA-225ENST00000515824 ZNF73O43830 326 aaPredicted RBP11.37□□□□□ -0.59
LMNA-225ENST00000515824 HINT1P49773 126 aaPredicted RBP11.37□□□□□ -0.59
LMNA-225ENST00000515824 Q6ZVH6 145 aa11.37□□□□□ -0.59
LMNA-225ENST00000515824 TSPAN13O95857 204 aa11.36□□□□□ -0.59
LMNA-225ENST00000515824 JOSD1Q15040 202 aaPredicted RBP11.36□□□□□ -0.59
LMNA-225ENST00000515824 Q6ZRX8 168 aa11.36□□□□□ -0.59
LMNA-225ENST00000515824 LRP2P98164 4655 aa11.36□□□□□ -0.59
LMNA-225ENST00000515824 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
LMNA-225ENST00000515824 C5orf52A6NGY3 159 aa11.35□□□□□ -0.59
LMNA-225ENST00000515824 IFITM1P13164 125 aa11.35□□□□□ -0.59
LMNA-225ENST00000515824 SCGB1D1O95968 90 aa11.33□□□□□ -0.6
LMNA-225ENST00000515824 LINC00304Q8N9R0 145 aa11.33□□□□□ -0.6
LMNA-225ENST00000515824 Q9BRP9 147 aa11.33□□□□□ -0.6
LMNA-225ENST00000515824 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
LMNA-225ENST00000515824 C3orf22Q8N5N4 141 aa11.32□□□□□ -0.6
LMNA-225ENST00000515824 ERC2-IT1O76042 136 aa11.31□□□□□ -0.6
LMNA-225ENST00000515824 GAGE2AQ6NT46 116 aa11.31□□□□□ -0.6
LMNA-225ENST00000515824 MUSTN1Q8IVN3 82 aa11.3□□□□□ -0.6
LMNA-225ENST00000515824 PRR4Q16378 134 aa11.29□□□□□ -0.6
LMNA-225ENST00000515824 LINC00483Q53H64 154 aa11.29□□□□□ -0.6
LMNA-225ENST00000515824 CTAG1AP78358 180 aa11.27□□□□□ -0.61
LMNA-225ENST00000515824 LPAP08519 4548 aa11.26□□□□□ -0.61
LMNA-225ENST00000515824 A6NDN8 102 aa11.25□□□□□ -0.61
LMNA-225ENST00000515824 SPAG11AQ6PDA7 123 aa11.25□□□□□ -0.61
LMNA-225ENST00000515824 C6orf99Q4VX62 202 aa11.24□□□□□ -0.61
LMNA-225ENST00000515824 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
LMNA-225ENST00000515824 DHRS4-AS1Q9P1J3 65 aa11.23□□□□□ -0.61
LMNA-225ENST00000515824 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
LMNA-225ENST00000515824 COX7BP24311 80 aa11.22□□□□□ -0.61
LMNA-225ENST00000515824 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
LMNA-225ENST00000515824 IGLV9-49A0A0B4J1Y8 123 aa11.2□□□□□ -0.62
LMNA-225ENST00000515824 ST20-AS1Q8NBB2 130 aa11.2□□□□□ -0.62
LMNA-225ENST00000515824 Q8NBF4 154 aa11.2□□□□□ -0.62
LMNA-225ENST00000515824 TRBV7-6A0A0J9YX20 115 aa11.19□□□□□ -0.62
LMNA-225ENST00000515824 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
LMNA-225ENST00000515824 COX8AP10176 69 aa11.18□□□□□ -0.62
LMNA-225ENST00000515824 MOBPQ13875 183 aa11.17□□□□□ -0.62
LMNA-225ENST00000515824 A0A1B0GWB2 263 aa11.16□□□□□ -0.62
LMNA-225ENST00000515824 DLEU1O43261 78 aa11.15□□□□□ -0.62
LMNA-225ENST00000515824 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
LMNA-225ENST00000515824 A4D1N5 150 aa11.14□□□□□ -0.63
LMNA-225ENST00000515824 SPINK1P00995 79 aa11.14□□□□□ -0.63
LMNA-225ENST00000515824 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
LMNA-225ENST00000515824 HIST1H4GQ99525 98 aa11.14□□□□□ -0.63
LMNA-225ENST00000515824 C9orf153Q5TBE3 101 aa11.13□□□□□ -0.63
LMNA-225ENST00000515824 SMIM11BQ8TCY0 68 aa11.13□□□□□ -0.63
LMNA-225ENST00000515824 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
LMNA-225ENST00000515824 SPRR1BP22528 89 aa11.12□□□□□ -0.63
LMNA-225ENST00000515824 TAL2Q16559 108 aa11.12□□□□□ -0.63
LMNA-225ENST00000515824 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
LMNA-225ENST00000515824 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
LMNA-225ENST00000515824 VAMP8Q9BV40 100 aa11.12□□□□□ -0.63
LMNA-225ENST00000515824 LAMTOR3Q9UHA4 124 aa11.1□□□□□ -0.63
LMNA-225ENST00000515824 VAMP3Q15836 100 aa11.09□□□□□ -0.63
LMNA-225ENST00000515824 DEFB105AQ8NG35 78 aa11.09□□□□□ -0.63
LMNA-225ENST00000515824 NHP2Q9NX24 153 aaKnown RBP11.09□□□□□ -0.63
LMNA-225ENST00000515824 IGLV7-46A0A075B6I9 117 aa11.07□□□□□ -0.64
LMNA-225ENST00000515824 TEX49A0A1B0GTD5 131 aa11.07□□□□□ -0.64
LMNA-225ENST00000515824 HIGD1BQ9P298 99 aa11.06□□□□□ -0.64
LMNA-225ENST00000515824 SLC25A20O43772 301 aa11.05□□□□□ -0.64
LMNA-225ENST00000515824 RPS29P62273 56 aaKnown RBP11.05□□□□□ -0.64
LMNA-225ENST00000515824 C12orf57Q99622 126 aa11.05□□□□□ -0.64
LMNA-225ENST00000515824 FP248Q71RG6 208 aaPredicted RBP11.03□□□□□ -0.64
LMNA-225ENST00000515824 TMA7Q9Y2S6 64 aaKnown RBP11.02□□□□□ -0.65
LMNA-225ENST00000515824 IGLV5-48A0A075B6I7 105 aa11.01□□□□□ -0.65
LMNA-225ENST00000515824 TPRXLQ17RH7 258 aa11.01□□□□□ -0.65
LMNA-225ENST00000515824 Q1RN00 199 aa11.01□□□□□ -0.65
LMNA-225ENST00000515824 LINC00575Q6W349 94 aa11□□□□□ -0.65
LMNA-225ENST00000515824 LINC01547P58512 204 aaPredicted RBP10.99□□□□□ -0.65
LMNA-225ENST00000515824 PYY3Q5JQD4 70 aa10.99□□□□□ -0.65
LMNA-225ENST00000515824 C2orf91Q6ZV80 131 aa10.99□□□□□ -0.65
LMNA-225ENST00000515824 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
LMNA-225ENST00000515824 BVES-AS1Q5T3Y7 98 aa10.98□□□□□ -0.65
LMNA-225ENST00000515824 Q8N377 158 aa10.98□□□□□ -0.65
LMNA-225ENST00000515824 RAB37Q96AX2 223 aa10.98□□□□□ -0.65
LMNA-225ENST00000515824 CDIP1Q9H305 208 aa10.98□□□□□ -0.65
LMNA-225ENST00000515824 hADV29S1A0JD25 119 aa10.97□□□□□ -0.65
LMNA-225ENST00000515824 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
LMNA-225ENST00000515824 CFC1P0CG37 223 aa10.97□□□□□ -0.65
LMNA-225ENST00000515824 SMIM29Q86T20 159 aa10.97□□□□□ -0.65
LMNA-225ENST00000515824 PRO1933Q9H354 126 aa10.97□□□□□ -0.65
LMNA-225ENST00000515824 H7C2G1 150 aa10.95□□□□□ -0.66
LMNA-225ENST00000515824 A0A0B4J2C4 111 aa10.94□□□□□ -0.66
LMNA-225ENST00000515824 HRCT1Q6UXD1 115 aa10.94□□□□□ -0.66
LMNA-225ENST00000515824 CEND1Q8N111 149 aa10.94□□□□□ -0.66
LMNA-225ENST00000515824 LIMD2Q9BT23 127 aa10.93□□□□□ -0.66
LMNA-225ENST00000515824 TMEM238LA0A1B0GVL6 79 aa10.92□□□□□ -0.66
LMNA-225ENST00000515824 A6NJY4 79 aa10.92□□□□□ -0.66
LMNA-225ENST00000515824 CD164Q04900 197 aa10.92□□□□□ -0.66
LMNA-225ENST00000515824 Q6ZQY7 126 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms