RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 IGKV2D-28P01615 120 aa4.58□□□□□ -1.68
NIPBL-208ENST00000514335 TLX1NBP0CAT3 122 aa4.58□□□□□ -1.68
NIPBL-208ENST00000514335 KRTAP10-9P60411 292 aa4.58□□□□□ -1.68
NIPBL-208ENST00000514335 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
NIPBL-208ENST00000514335 PRCDQ00LT1 54 aa4.58□□□□□ -1.68
NIPBL-208ENST00000514335 CCDC168Q8NDH2 2452 aa4.58□□□□□ -1.68
NIPBL-208ENST00000514335 SPENQ96T58 3664 aaKnown RBP4.58□□□□□ -1.68
NIPBL-208ENST00000514335 TRGV2A0A075B6R0 118 aa4.57□□□□□ -1.68
NIPBL-208ENST00000514335 CCL19Q99731 98 aa4.57□□□□□ -1.68
NIPBL-208ENST00000514335 FBN1P35555 2871 aaKnown RBP4.57□□□□□ -1.68
NIPBL-208ENST00000514335 IGHV4-4A0A075B6R2 117 aa4.56□□□□□ -1.68
NIPBL-208ENST00000514335 CRYBG3Q68DQ2 2970 aa4.56□□□□□ -1.68
NIPBL-208ENST00000514335 TRGV4A0A0C4DH28 118 aa4.56□□□□□ -1.68
NIPBL-208ENST00000514335 C7orf33Q8WU49 177 aa4.56□□□□□ -1.68
NIPBL-208ENST00000514335 H0YGG7 62 aa4.56□□□□□ -1.68
NIPBL-208ENST00000514335 SUMO4Q6EEV6 95 aa4.56□□□□□ -1.68
NIPBL-208ENST00000514335 IGLV4-3A0A075B6K6 122 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 ETDCA0A1B0GVM5 59 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 KRTAP26-1Q6PEX3 210 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 C9orf163Q8N9P6 203 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 CELSR1Q9NYQ6 3014 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 IGKV3OR2-268A0A0C4DH90 116 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 A6NDX4 124 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-208ENST00000514335 Q8N9W7 124 aa4.55□□□□□ -1.68
NIPBL-208ENST00000514335 RP1L1Q8IWN7 2480 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-208ENST00000514335 POLR2KP53803 58 aaKnown RBP4.54□□□□□ -1.68
NIPBL-208ENST00000514335 ZNF861PO60384 105 aa4.54□□□□□ -1.68
NIPBL-208ENST00000514335 PDE6HQ13956 83 aa4.54□□□□□ -1.68
NIPBL-208ENST00000514335 NIPBLQ6KC79 2804 aaeCLIP4.53□□□□□ -1.68
NIPBL-208ENST00000514335 ATRQ13535 2644 aa4.53□□□□□ -1.68
NIPBL-208ENST00000514335 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
NIPBL-208ENST00000514335 DEFB134Q4QY38 66 aa4.53□□□□□ -1.68
NIPBL-208ENST00000514335 RPL39P5Q59GN2 51 aa4.53□□□□□ -1.68
NIPBL-208ENST00000514335 LYZP61626 148 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 PKDREJQ9NTG1 2253 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 NBEAL1Q6ZS30 2694 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 IGKV3-7A0A075B6H7 116 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 CCL18P55774 89 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 LINC00158P58513 81 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 IGFL4Q6B9Z1 124 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 SPRR4Q96PI1 79 aa4.52□□□□□ -1.69
NIPBL-208ENST00000514335 CSMD1Q96PZ7 3565 aa4.51□□□□□ -1.69
NIPBL-208ENST00000514335 BOD1L1Q8NFC6 3051 aa4.51□□□□□ -1.69
NIPBL-208ENST00000514335 JMJD1CQ15652 2540 aa4.51□□□□□ -1.69
NIPBL-208ENST00000514335 IGLV8-61A0A075B6I0 122 aa4.51□□□□□ -1.69
NIPBL-208ENST00000514335 ERHP84090 104 aaKnown RBP4.51□□□□□ -1.69
NIPBL-208ENST00000514335 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
NIPBL-208ENST00000514335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.51□□□□□ -1.69
NIPBL-208ENST00000514335 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
NIPBL-208ENST00000514335 IGLV10-54A0A075B6I4 117 aa4.5□□□□□ -1.69
NIPBL-208ENST00000514335 A0A087WSZ3 146 aa4.49□□□□□ -1.69
NIPBL-208ENST00000514335 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
NIPBL-208ENST00000514335 IGLV5-37A0A075B6J1 123 aa4.49□□□□□ -1.69
NIPBL-208ENST00000514335 SMR3AQ99954 134 aa4.49□□□□□ -1.69
NIPBL-208ENST00000514335 CDKN2A-AS1Q9UH64 79 aa4.49□□□□□ -1.69
NIPBL-208ENST00000514335 DNAH3Q8TD57 4116 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 IGLV1-50A0A075B6I6 118 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 IGHV4OR15-8A0A075B7B6 117 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 A0A087WW49 117 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 IGLV1-40P01703 118 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 CHCHD7Q9BUK0 85 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 ACANP16112 2415 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 COL6A5A8TX70 2615 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 ODF3BA8MYP8 253 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 WT1-ASQ06250 92 aa4.48□□□□□ -1.69
NIPBL-208ENST00000514335 IGHV3-23P01764 117 aa4.47□□□□□ -1.69
NIPBL-208ENST00000514335 CCL3L1P16619 93 aa4.47□□□□□ -1.69
NIPBL-208ENST00000514335 STAB1Q9NY15 2570 aa4.47□□□□□ -1.69
NIPBL-208ENST00000514335 IGHV4-30-2A0A087WSY4 118 aa4.46□□□□□ -1.7
NIPBL-208ENST00000514335 DEFB114Q30KQ6 69 aa4.46□□□□□ -1.7
NIPBL-208ENST00000514335 IGHV3-66A0A0C4DH42 116 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 H3BPC8 53 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 H3BRN7 92 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 C1orf137Q5JT78 98 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 LINC00472Q9H8W2 130 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 IGLV5-39A0A0G2JS06 123 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
NIPBL-208ENST00000514335 LINC00315P59091 139 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
NIPBL-208ENST00000514335 NSD1Q96L73 2696 aaPredicted RBP4.44□□□□□ -1.7
NIPBL-208ENST00000514335 NUPR2A6NF83 97 aa4.44□□□□□ -1.7
NIPBL-208ENST00000514335 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
NIPBL-208ENST00000514335 C15orf56Q8N910 161 aa4.44□□□□□ -1.7
NIPBL-208ENST00000514335 KLK12Q9UKR0 248 aa4.44□□□□□ -1.7
NIPBL-208ENST00000514335 IGLV7-46A0A075B6I9 117 aa4.43□□□□□ -1.7
NIPBL-208ENST00000514335 C10orf55Q5SWW7 151 aa4.43□□□□□ -1.7
NIPBL-208ENST00000514335 Q5W150 140 aa4.43□□□□□ -1.7
NIPBL-208ENST00000514335 A0A087WTM6 91 aa4.42□□□□□ -1.7
NIPBL-208ENST00000514335 PANO1I0J062 215 aa4.42□□□□□ -1.7
NIPBL-208ENST00000514335 KRTAP17-1Q9BYP8 105 aa4.42□□□□□ -1.7
NIPBL-208ENST00000514335 PRAC2D3DTV9 90 aa4.42□□□□□ -1.7
NIPBL-208ENST00000514335 IGLV11-55A0A075B6I3 123 aa4.42□□□□□ -1.7
NIPBL-208ENST00000514335 COX7BP24311 80 aa4.41□□□□□ -1.7
NIPBL-208ENST00000514335 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
NIPBL-208ENST00000514335 IGHV3-64DA0A0J9YX35 117 aa4.41□□□□□ -1.7
NIPBL-208ENST00000514335 INSP01308 110 aa4.41□□□□□ -1.7
NIPBL-208ENST00000514335 COX6A2Q02221 97 aa4.41□□□□□ -1.7
NIPBL-208ENST00000514335 LINC00575Q6W349 94 aa4.41□□□□□ -1.7
NIPBL-208ENST00000514335 Q8NBF4 154 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms