RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 C21orf62-AS1Q17RA5 79 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 C9orf163Q8N9P6 203 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 NKAPP1Q8N9T2 125 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 ORMDL1Q9P0S3 153 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 HERC2O95714 4834 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 TEX49A0A1B0GTD5 131 aa5.37□□□□□ -1.55
RNF4-220ENST00000513578 hADV29S1A0JD25 119 aa5.37□□□□□ -1.55
RNF4-220ENST00000513578 PRYO14603 147 aa5.37□□□□□ -1.55
RNF4-220ENST00000513578 GHRHP01286 108 aa5.37□□□□□ -1.55
RNF4-220ENST00000513578 INAFM2P0DMQ5 153 aa5.37□□□□□ -1.55
RNF4-220ENST00000513578 COX7BP24311 80 aa5.37□□□□□ -1.55
RNF4-220ENST00000513578 OBSCN-AS1Q96MR7 158 aa5.37□□□□□ -1.55
RNF4-220ENST00000513578 IGLV1-50A0A075B6I6 118 aa5.36□□□□□ -1.55
RNF4-220ENST00000513578 FAM240AA0A1B0GVK7 77 aa5.36□□□□□ -1.55
RNF4-220ENST00000513578 TMEM256-PLSCR3K7ERE1 68 aa5.36□□□□□ -1.55
RNF4-220ENST00000513578 SPRR1AP35321 89 aa5.36□□□□□ -1.55
RNF4-220ENST00000513578 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
RNF4-220ENST00000513578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.36□□□□□ -1.55
RNF4-220ENST00000513578 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
RNF4-220ENST00000513578 VPS25Q9BRG1 176 aa5.36□□□□□ -1.55
RNF4-220ENST00000513578 DNAH10Q8IVF4 4471 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 ALMS1Q8TCU4 4167 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 A0A087WTM6 91 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 A0A096LNI7 61 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 KRTAP4-16G5E9R7 235 aaPredicted RBP5.34□□□□□ -1.55
RNF4-220ENST00000513578 JMJD7-PLA2G4BH0Y9G9 81 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 C3orf84H3BNL1 204 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 ACYP1P07311 99 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 MRPL55Q7Z7F7 128 aaKnown RBP5.34□□□□□ -1.55
RNF4-220ENST00000513578 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
RNF4-220ENST00000513578 DNAH17Q9UFH2 4485 aa5.34□□□□□ -1.56
RNF4-220ENST00000513578 FAM168BA1KXE4 195 aa5.33□□□□□ -1.56
RNF4-220ENST00000513578 EPM2AB3EWF7 344 aa5.33□□□□□ -1.56
RNF4-220ENST00000513578 SDIM1Q6ZPB5 146 aa5.33□□□□□ -1.56
RNF4-220ENST00000513578 CDIP1Q9H305 208 aa5.33□□□□□ -1.56
RNF4-220ENST00000513578 DNAH2Q9P225 4427 aa5.32□□□□□ -1.56
RNF4-220ENST00000513578 TENM2Q9NT68 2774 aa5.32□□□□□ -1.56
RNF4-220ENST00000513578 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.32□□□□□ -1.56
RNF4-220ENST00000513578 LINC00476Q8WZB0 136 aa5.32□□□□□ -1.56
RNF4-220ENST00000513578 B5MCH6 92 aa5.31□□□□□ -1.56
RNF4-220ENST00000513578 M0R2N4 97 aa5.31□□□□□ -1.56
RNF4-220ENST00000513578 C1orf134Q5TEV5 83 aa5.31□□□□□ -1.56
RNF4-220ENST00000513578 Q6ZQY7 126 aa5.31□□□□□ -1.56
RNF4-220ENST00000513578 Q6ZRX8 168 aa5.31□□□□□ -1.56
RNF4-220ENST00000513578 FAM19A5Q7Z5A7 132 aaPredicted RBP5.31□□□□□ -1.56
RNF4-220ENST00000513578 DHRS4-AS1Q9P1J3 65 aa5.31□□□□□ -1.56
RNF4-220ENST00000513578 A0A1W2PNN7 141 aa5.3□□□□□ -1.56
RNF4-220ENST00000513578 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
RNF4-220ENST00000513578 LYSTQ99698 3801 aa5.29□□□□□ -1.56
RNF4-220ENST00000513578 ETDCA0A1B0GVM5 59 aa5.29□□□□□ -1.56
RNF4-220ENST00000513578 REG3GQ6UW15 175 aa5.29□□□□□ -1.56
RNF4-220ENST00000513578 LOC110117498A0A087WWA1 95 aa5.28□□□□□ -1.56
RNF4-220ENST00000513578 IGKV2-24A0A0C4DH68 120 aa5.28□□□□□ -1.56
RNF4-220ENST00000513578 RPL37AP8A6NKH3 93 aa5.28□□□□□ -1.56
RNF4-220ENST00000513578 LY6G6CO95867 125 aa5.28□□□□□ -1.56
RNF4-220ENST00000513578 PDE6GP18545 87 aa5.28□□□□□ -1.56
RNF4-220ENST00000513578 H0Y9J4 135 aa5.27□□□□□ -1.57
RNF4-220ENST00000513578 CCKP06307 115 aa5.27□□□□□ -1.57
RNF4-220ENST00000513578 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
RNF4-220ENST00000513578 IGLV5-48A0A075B6I7 105 aa5.26□□□□□ -1.57
RNF4-220ENST00000513578 RTL8CO15255 209 aa5.26□□□□□ -1.57
RNF4-220ENST00000513578 CHTF8P0CG12 524 aa5.26□□□□□ -1.57
RNF4-220ENST00000513578 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
RNF4-220ENST00000513578 RBM3P98179 157 aaKnown RBP5.26□□□□□ -1.57
RNF4-220ENST00000513578 Q9BRP9 147 aa5.26□□□□□ -1.57
RNF4-220ENST00000513578 C14orf132Q9NPU4 83 aa5.26□□□□□ -1.57
RNF4-220ENST00000513578 XGP55808 180 aa5.25□□□□□ -1.57
RNF4-220ENST00000513578 NDUFV3P56181 108 aaKnown RBP5.25□□□□□ -1.57
RNF4-220ENST00000513578 LINC01547P58512 204 aaPredicted RBP5.25□□□□□ -1.57
RNF4-220ENST00000513578 TRBV7-4A0A0J9YYF1 115 aa5.24□□□□□ -1.57
RNF4-220ENST00000513578 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
RNF4-220ENST00000513578 Q6ZQT0 140 aa5.24□□□□□ -1.57
RNF4-220ENST00000513578 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
RNF4-220ENST00000513578 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
RNF4-220ENST00000513578 LAMTOR3Q9UHA4 124 aa5.24□□□□□ -1.57
RNF4-220ENST00000513578 IGLV5-52A0A0A0MRZ9 124 aa5.23□□□□□ -1.57
RNF4-220ENST00000513578 PANO1I0J062 215 aa5.23□□□□□ -1.57
RNF4-220ENST00000513578 Q6Q795 121 aa5.23□□□□□ -1.57
RNF4-220ENST00000513578 Q8N377 158 aa5.23□□□□□ -1.57
RNF4-220ENST00000513578 SMCR5Q8TEV8 140 aa5.23□□□□□ -1.57
RNF4-220ENST00000513578 DSCR8Q96T75 97 aa5.23□□□□□ -1.57
RNF4-220ENST00000513578 PLAC8Q9NZF1 115 aa5.23□□□□□ -1.57
RNF4-220ENST00000513578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
RNF4-220ENST00000513578 MT-ATP8P03928 68 aa5.22□□□□□ -1.57
RNF4-220ENST00000513578 UBE2BP63146 152 aa5.22□□□□□ -1.57
RNF4-220ENST00000513578 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
RNF4-220ENST00000513578 KMT2AQ03164 3969 aa5.22□□□□□ -1.57
RNF4-220ENST00000513578 BCE1O60756 84 aa5.21□□□□□ -1.58
RNF4-220ENST00000513578 FAM19A1Q7Z5A9 133 aa5.21□□□□□ -1.58
RNF4-220ENST00000513578 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
RNF4-220ENST00000513578 IMUPQ9GZP8 106 aa5.21□□□□□ -1.58
RNF4-220ENST00000513578 DNAH8Q96JB1 4490 aa5.21□□□□□ -1.58
RNF4-220ENST00000513578 TRBV7-7A0A0K0K1E9 115 aa5.2□□□□□ -1.58
RNF4-220ENST00000513578 A0A1B0GW54 56 aa5.2□□□□□ -1.58
RNF4-220ENST00000513578 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
RNF4-220ENST00000513578 SPRR1BP22528 89 aa5.2□□□□□ -1.58
RNF4-220ENST00000513578 KRTAP13-1Q8IUC0 172 aa5.2□□□□□ -1.58
RNF4-220ENST00000513578 LINC00846Q9NV44 126 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms