RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 CDSNQ15517 529 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 ZNF575Q86XF7 245 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 LINC00588Q9Y4M8 146 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 MRPL34Q9BQ48 92 aaKnown RBP3.3□□□□□ -1.88
PTPN13-209ENST00000511467 CHD7Q9P2D1 2997 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 A0A0C4DFX4 3053 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 LINC00476Q8WZB0 136 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 RETNLBQ9BQ08 111 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 LINC00304Q8N9R0 145 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 XGP55808 180 aa3.3□□□□□ -1.88
PTPN13-209ENST00000511467 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 UQCR11O14957 56 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 OBSCN-AS1Q96MR7 158 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 IGHV6-1A0A0B4J1U7 121 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 C18orf65Q6ZTR6 163 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 EPM2AB3EWF7 344 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 TSPEAR-AS2P59090 65 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 C10orf99Q6UWK7 81 aa3.29□□□□□ -1.88
PTPN13-209ENST00000511467 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
PTPN13-209ENST00000511467 ITPR1Q14643 2758 aa3.28□□□□□ -1.88
PTPN13-209ENST00000511467 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
PTPN13-209ENST00000511467 DEFB1P60022 68 aa3.28□□□□□ -1.88
PTPN13-209ENST00000511467 LINC00846Q9NV44 126 aa3.28□□□□□ -1.88
PTPN13-209ENST00000511467 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
PTPN13-209ENST00000511467 CHD9Q3L8U1 2897 aa3.27□□□□□ -1.89
PTPN13-209ENST00000511467 IGLV8-61A0A075B6I0 122 aa3.27□□□□□ -1.89
PTPN13-209ENST00000511467 HRES1P13985 223 aa3.27□□□□□ -1.89
PTPN13-209ENST00000511467 TTTY13Q9BZ97 58 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 CEP350Q5VT06 3117 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 SLPIP03973 132 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 A0A087WTM6 91 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 Q6ZSN1 163 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 KRTAP24-1Q3LI83 254 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 LITAFQ99732 161 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 SPRR1BP22528 89 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 SOSTDC1Q6X4U4 206 aa3.26□□□□□ -1.89
PTPN13-209ENST00000511467 PRM2P04554 102 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 DEFB104AQ8WTQ1 72 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 ST20-AS1Q8NBB2 130 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 KRTAP10-9P60411 292 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 IGLV7-43P04211 117 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 SELENOKQ9Y6D0 94 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 LRCOL1A6NCL2 159 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 CDIP1Q9H305 208 aa3.25□□□□□ -1.89
PTPN13-209ENST00000511467 SVIPQ8NHG7 77 aa3.24□□□□□ -1.89
PTPN13-209ENST00000511467 C5orf42Q9H799 3197 aa3.23□□□□□ -1.89
PTPN13-209ENST00000511467 OXTP01178 125 aa3.23□□□□□ -1.89
PTPN13-209ENST00000511467 PRLHP81277 87 aa3.23□□□□□ -1.89
PTPN13-209ENST00000511467 A0A087X002 238 aa3.23□□□□□ -1.89
PTPN13-209ENST00000511467 K7EIL1 84 aa3.23□□□□□ -1.89
PTPN13-209ENST00000511467 Q5XG85 94 aa3.23□□□□□ -1.89
PTPN13-209ENST00000511467 PLAC8Q9NZF1 115 aa3.22□□□□□ -1.89
PTPN13-209ENST00000511467 SNURFQ9Y675 71 aa3.22□□□□□ -1.89
PTPN13-209ENST00000511467 VPS13AQ96RL7 3174 aa3.22□□□□□ -1.89
PTPN13-209ENST00000511467 SPRR1AP35321 89 aa3.22□□□□□ -1.89
PTPN13-209ENST00000511467 APLNQ9ULZ1 77 aa3.22□□□□□ -1.89
PTPN13-209ENST00000511467 C8orf17Q9NRJ1 99 aa3.21□□□□□ -1.89
PTPN13-209ENST00000511467 MPLKIPQ8TAP9 179 aa3.21□□□□□ -1.9
PTPN13-209ENST00000511467 GAS8-AS1O95177 125 aa3.21□□□□□ -1.9
PTPN13-209ENST00000511467 Q1T7F1 81 aa3.21□□□□□ -1.9
PTPN13-209ENST00000511467 KRTAP1-3Q8IUG1 177 aa3.21□□□□□ -1.9
PTPN13-209ENST00000511467 TENM1Q9UKZ4 2725 aa3.21□□□□□ -1.9
PTPN13-209ENST00000511467 GIG44P09565 113 aaPredicted RBP3.21□□□□□ -1.9
PTPN13-209ENST00000511467 SPACA4Q8TDM5 124 aa3.21□□□□□ -1.9
PTPN13-209ENST00000511467 A0A096LNI7 61 aa3.2□□□□□ -1.9
PTPN13-209ENST00000511467 SEC61BP60468 96 aaKnown RBP3.2□□□□□ -1.9
PTPN13-209ENST00000511467 LRBAP50851 2863 aa3.2□□□□□ -1.9
PTPN13-209ENST00000511467 COX6B2Q6YFQ2 88 aa3.2□□□□□ -1.9
PTPN13-209ENST00000511467 J3QL48 77 aa3.2□□□□□ -1.9
PTPN13-209ENST00000511467 IGKV2D-30A0A075B6S6 120 aa3.19□□□□□ -1.9
PTPN13-209ENST00000511467 IGKV2-30P06310 120 aa3.19□□□□□ -1.9
PTPN13-209ENST00000511467 LAMA2P24043 3122 aaKnown RBP3.19□□□□□ -1.9
PTPN13-209ENST00000511467 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
PTPN13-209ENST00000511467 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
PTPN13-209ENST00000511467 Q8N377 158 aa3.19□□□□□ -1.9
PTPN13-209ENST00000511467 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
PTPN13-209ENST00000511467 HIVEP1P15822 2718 aa3.19□□□□□ -1.9
PTPN13-209ENST00000511467 IGFL1Q6UW32 110 aa3.18□□□□□ -1.9
PTPN13-209ENST00000511467 RETNQ9HD89 108 aa3.18□□□□□ -1.9
PTPN13-209ENST00000511467 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
PTPN13-209ENST00000511467 LINC00483Q53H64 154 aa3.18□□□□□ -1.9
PTPN13-209ENST00000511467 KRTAP1-1Q07627 177 aa3.17□□□□□ -1.9
PTPN13-209ENST00000511467 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
PTPN13-209ENST00000511467 SMR3AQ99954 134 aa3.17□□□□□ -1.9
PTPN13-209ENST00000511467 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
PTPN13-209ENST00000511467 TRIOO75962 3097 aa3.17□□□□□ -1.9
PTPN13-209ENST00000511467 IGLV7-46A0A075B6I9 117 aa3.17□□□□□ -1.9
PTPN13-209ENST00000511467 PRB4P10163 310 aaPredicted RBP3.17□□□□□ -1.9
PTPN13-209ENST00000511467 NBEAL2Q6ZNJ1 2754 aa3.17□□□□□ -1.9
PTPN13-209ENST00000511467 Q96NJ1 140 aa3.16□□□□□ -1.9
PTPN13-209ENST00000511467 HRCT1Q6UXD1 115 aa3.15□□□□□ -1.9
PTPN13-209ENST00000511467 FRYQ5TBA9 3013 aa3.15□□□□□ -1.9
PTPN13-209ENST00000511467 DMAC1Q96GE9 116 aa3.15□□□□□ -1.9
PTPN13-209ENST00000511467 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.91
PTPN13-209ENST00000511467 PHF5AQ7RTV0 110 aaKnown RBP3.15□□□□□ -1.91
PTPN13-209ENST00000511467 NF1P21359 2839 aa3.15□□□□□ -1.91
PTPN13-209ENST00000511467 SMCPP49901 116 aaPredicted RBP3.15□□□□□ -1.91
PTPN13-209ENST00000511467 COA5Q86WW8 74 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms