RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CSPG4Q6UVK1 2322 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 CUBNO60494 3623 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 CELSR1Q9NYQ6 3014 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 ABCA1O95477 2261 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 TRBV10-1A0A0K0K1A3 114 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 UBE2G1P62253 170 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 Q0VG73 95 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 PYY3Q5JQD4 70 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 UNQ5815/PRO19632Q6UWF5 114 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 C5orf56Q8N8D9 126 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 DYNLRB2Q8TF09 96 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 TSKUQ8WUA8 353 aa1.35□□□□□ -2.19
HMGB1P47-201ENST00000511281 CCDC168Q8NDH2 2452 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 PCNX1Q96RV3 2341 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 OTOGQ6ZRI0 2925 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 UTP20O75691 2785 aaKnown RBP1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 VPS13CQ709C8 3753 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 A0A096LNT2 108 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 TRBV7-1A0A0A6YYK4 115 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 CLPSL1A2RUU4 121 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 FAM223BA6NKX1 122 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 LINC00587B1AMM8 73 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 G3V318 75 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 H3BUA1 57 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 H3BUX3 64 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 M0R3E3 92 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 SPINK4O60575 86 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 TPPP2P59282 170 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 PKIAP61925 76 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 IQCJQ1A5X6 159 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 Q6AWC8 147 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 MRPL54Q6P161 138 aaKnown RBP1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 BAGE3Q86Y29 109 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 FAM223AQ8IWN6 122 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 USMG5Q96IX5 58 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 RABAC1Q9UI14 185 aa1.34□□□□□ -2.19
HMGB1P47-201ENST00000511281 WNK2Q9Y3S1 2297 aa1.34□□□□□ -2.2
HMGB1P47-201ENST00000511281 POLQO75417 2590 aa1.34□□□□□ -2.2
HMGB1P47-201ENST00000511281 FLNBO75369 2602 aaKnown RBP1.34□□□□□ -2.2
HMGB1P47-201ENST00000511281 CELSR2Q9HCU4 2923 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 MYO7BQ6PIF6 2116 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 HIVEP3Q5T1R4 2406 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 A0A1B0GUT8 65 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 RBAKDNA6NC62 111 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 F2Z2F3 143 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 NDUFA4O00483 81 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 CRIP1P50238 77 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 DEFB112Q30KQ8 113 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 VPS25Q9BRG1 176 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 CNFNQ9BYD5 112 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 CRYBG3Q68DQ2 2970 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 ABCA12Q86UK0 2595 aa1.33□□□□□ -2.2
HMGB1P47-201ENST00000511281 MTORP42345 2549 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 LOC101927531A0A1B0GV80 90 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 C20orf202A1L168 122 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 ARMS2P0C7Q2 107 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 PRB4P10163 310 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 KRTDAPP60985 99 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 NDUFA11Q86Y39 141 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 C18orf32Q8TCD1 76 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 MYOZ3Q8TDC0 251 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 VAMP8Q9BV40 100 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 RHPN1-AS1Q9BWJ2 59 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 AGPAT4-IT1Q9H0P7 198 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 PRO1933Q9H354 126 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 MYO9AB2RTY4 2548 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 ZFHX3Q15911 3703 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 UNC79Q9P2D8 2635 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 NAV3Q8IVL0 2385 aa1.32□□□□□ -2.2
HMGB1P47-201ENST00000511281 TEX15Q9BXT5 2789 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 TNCP24821 2201 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 MAST4O15021 2626 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 TRAV21A0A0B4J279 112 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 D6R8Y8 96 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 SYS1-DBNDD2H3BUS1 97 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 C3orf79P0CE67 100 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 ASIPP42127 132 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 PMCHL1Q16048 86 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 C14orf144Q96I85 54 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 C2orf88Q9BSF0 95 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 TMEM191AQ9H0A3 160 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 ERG28Q9UKR5 140 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 LENEPQ9Y5L5 61 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 SONP18583 2426 aaKnown RBP1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 APCP25054 2843 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 TLN2Q9Y4G6 2542 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 DCHS2Q6V1P9 2916 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 FLNCQ14315 2725 aa1.31□□□□□ -2.2
HMGB1P47-201ENST00000511281 F8P00451 2351 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 LINC01546A6NGU7 62 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 H3BVH4 76 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 LEPROTL1O95214 131 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 CCKP06307 115 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 DEFB1P60022 68 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 TDRG1Q3Y452 100 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 PSMG4Q5JS54 123 aa1.3□□□□□ -2.2
HMGB1P47-201ENST00000511281 SPANXN1Q5VSR9 72 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms