RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
NEK1-206ENST00000510533 POLQO75417 2590 aa6.94□□□□□ -1.3
NEK1-206ENST00000510533 LINC00612Q8N6U2 182 aa6.94□□□□□ -1.3
NEK1-206ENST00000510533 PLA2G2DQ9UNK4 145 aa6.94□□□□□ -1.3
NEK1-206ENST00000510533 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 LINC00336Q6ZUF6 198 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 F8P00451 2351 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 EP400Q96L91 3159 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 ZNF861PO60384 105 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 A0A0G2JQZ4 141 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
NEK1-206ENST00000510533 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
NEK1-206ENST00000510533 KRTAP10-11P60412 298 aa6.91□□□□□ -1.3
NEK1-206ENST00000510533 ACANP16112 2415 aa6.91□□□□□ -1.3
NEK1-206ENST00000510533 OBSCN-AS1Q96MR7 158 aa6.9□□□□□ -1.31
NEK1-206ENST00000510533 K7EIL1 84 aa6.89□□□□□ -1.31
NEK1-206ENST00000510533 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
NEK1-206ENST00000510533 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
NEK1-206ENST00000510533 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
NEK1-206ENST00000510533 C9orf163Q8N9P6 203 aa6.88□□□□□ -1.31
NEK1-206ENST00000510533 A0A096LNT2 108 aa6.88□□□□□ -1.31
NEK1-206ENST00000510533 A0A1W2PNM2 257 aa6.88□□□□□ -1.31
NEK1-206ENST00000510533 A0A087WTM6 91 aa6.86□□□□□ -1.31
NEK1-206ENST00000510533 CD164Q04900 197 aa6.86□□□□□ -1.31
NEK1-206ENST00000510533 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
NEK1-206ENST00000510533 KRTAP10-3P60369 221 aa6.85□□□□□ -1.31
NEK1-206ENST00000510533 C9orf92A6NGG3 77 aa6.85□□□□□ -1.31
NEK1-206ENST00000510533 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
NEK1-206ENST00000510533 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
NEK1-206ENST00000510533 SPRR4Q96PI1 79 aa6.83□□□□□ -1.32
NEK1-206ENST00000510533 FASNP49327 2511 aaKnown RBP6.83□□□□□ -1.32
NEK1-206ENST00000510533 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
NEK1-206ENST00000510533 IGLV5-48A0A075B6I7 105 aa6.82□□□□□ -1.32
NEK1-206ENST00000510533 CASC10Q5T4H9 136 aa6.82□□□□□ -1.32
NEK1-206ENST00000510533 LCA10Q71F78 164 aa6.82□□□□□ -1.32
NEK1-206ENST00000510533 PSORS1C2Q9UIG4 136 aa6.81□□□□□ -1.32
NEK1-206ENST00000510533 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
NEK1-206ENST00000510533 COX6B2Q6YFQ2 88 aa6.81□□□□□ -1.32
NEK1-206ENST00000510533 J3QL48 77 aa6.8□□□□□ -1.32
NEK1-206ENST00000510533 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
NEK1-206ENST00000510533 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
NEK1-206ENST00000510533 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
NEK1-206ENST00000510533 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
NEK1-206ENST00000510533 ZNF575Q86XF7 245 aa6.76□□□□□ -1.33
NEK1-206ENST00000510533 Q8N1X5 172 aa6.75□□□□□ -1.33
NEK1-206ENST00000510533 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
NEK1-206ENST00000510533 Q1T7F1 81 aa6.73□□□□□ -1.33
NEK1-206ENST00000510533 A0A0D9SG42 100 aa6.72□□□□□ -1.33
NEK1-206ENST00000510533 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
NEK1-206ENST00000510533 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.33
NEK1-206ENST00000510533 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
NEK1-206ENST00000510533 KRTAP1-3Q8IUG1 177 aa6.69□□□□□ -1.34
NEK1-206ENST00000510533 IGLV7-46A0A075B6I9 117 aa6.68□□□□□ -1.34
NEK1-206ENST00000510533 USP24Q9UPU5 2620 aa6.66□□□□□ -1.34
NEK1-206ENST00000510533 KRTAP1-1Q07627 177 aa6.65□□□□□ -1.34
NEK1-206ENST00000510533 EPG5Q9HCE0 2579 aa6.65□□□□□ -1.35
NEK1-206ENST00000510533 CR1P17927 2039 aa6.64□□□□□ -1.35
NEK1-206ENST00000510533 WIPF1O43516 503 aa6.64□□□□□ -1.35
NEK1-206ENST00000510533 HRES1P13985 223 aa6.63□□□□□ -1.35
NEK1-206ENST00000510533 Q75L30 129 aa6.63□□□□□ -1.35
NEK1-206ENST00000510533 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
NEK1-206ENST00000510533 A0A1B0GU33 70 aa6.6□□□□□ -1.35
NEK1-206ENST00000510533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
NEK1-206ENST00000510533 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
NEK1-206ENST00000510533 TNP2Q05952 138 aa6.59□□□□□ -1.35
NEK1-206ENST00000510533 PRRC2CQ9Y520 2896 aaKnown RBP6.59□□□□□ -1.35
NEK1-206ENST00000510533 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
NEK1-206ENST00000510533 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
NEK1-206ENST00000510533 FAM229BQ4G0N7 80 aa6.58□□□□□ -1.36
NEK1-206ENST00000510533 Q5XG85 94 aa6.58□□□□□ -1.36
NEK1-206ENST00000510533 Q8N9P0 234 aaPredicted RBP6.58□□□□□ -1.36
NEK1-206ENST00000510533 Q8NDZ9 215 aa6.57□□□□□ -1.36
NEK1-206ENST00000510533 SPRR1AP35321 89 aa6.56□□□□□ -1.36
NEK1-206ENST00000510533 HECTD1Q9ULT8 2610 aa6.56□□□□□ -1.36
NEK1-206ENST00000510533 Q6ZSA8 131 aa6.55□□□□□ -1.36
NEK1-206ENST00000510533 CYSTM1Q9H1C7 97 aa6.55□□□□□ -1.36
NEK1-206ENST00000510533 BPTFQ12830 3046 aa6.55□□□□□ -1.36
NEK1-206ENST00000510533 FP248Q71RG6 208 aaPredicted RBP6.54□□□□□ -1.36
NEK1-206ENST00000510533 FLNBO75369 2602 aaKnown RBP6.54□□□□□ -1.36
NEK1-206ENST00000510533 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
NEK1-206ENST00000510533 GOLGB1Q14789 3259 aaKnown RBP6.51□□□□□ -1.37
NEK1-206ENST00000510533 PLAC8Q9NZF1 115 aa6.51□□□□□ -1.37
NEK1-206ENST00000510533 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
NEK1-206ENST00000510533 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
NEK1-206ENST00000510533 SPRR1BP22528 89 aa6.49□□□□□ -1.37
NEK1-206ENST00000510533 Q5VV11 94 aa6.49□□□□□ -1.37
NEK1-206ENST00000510533 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
NEK1-206ENST00000510533 Q5W150 140 aa6.48□□□□□ -1.37
NEK1-206ENST00000510533 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
NEK1-206ENST00000510533 FLNAP21333 2647 aaKnown RBP6.47□□□□□ -1.37
NEK1-206ENST00000510533 LINC00483Q53H64 154 aa6.45□□□□□ -1.38
NEK1-206ENST00000510533 SPINK7P58062 85 aa6.44□□□□□ -1.38
NEK1-206ENST00000510533 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
NEK1-206ENST00000510533 S4R3F8 94 aa6.43□□□□□ -1.38
NEK1-206ENST00000510533 ATRQ13535 2644 aa6.43□□□□□ -1.38
NEK1-206ENST00000510533 ITPR3Q14573 2671 aa6.41□□□□□ -1.38
NEK1-206ENST00000510533 DNAH12Q6ZR08 3092 aa6.41□□□□□ -1.38
NEK1-206ENST00000510533 MAST4O15021 2626 aa6.39□□□□□ -1.39
NEK1-206ENST00000510533 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms