RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 FAM236BA0A1B0GV22 79 aa3.27□□□□□ -1.89
PHF3-210ENST00000509876 KRTAP1-5Q9BYS1 174 aa3.27□□□□□ -1.89
PHF3-210ENST00000509876 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
PHF3-210ENST00000509876 MGAM2Q2M2H8 2515 aa3.27□□□□□ -1.89
PHF3-210ENST00000509876 ATP11AUNQ6ZP68 121 aa3.27□□□□□ -1.89
PHF3-210ENST00000509876 C3orf22Q8N5N4 141 aa3.27□□□□□ -1.89
PHF3-210ENST00000509876 SPRR4Q96PI1 79 aa3.26□□□□□ -1.89
PHF3-210ENST00000509876 CDIP1Q9H305 208 aa3.26□□□□□ -1.89
PHF3-210ENST00000509876 FRYQ5TBA9 3013 aa3.26□□□□□ -1.89
PHF3-210ENST00000509876 LINC00313P59037 77 aa3.26□□□□□ -1.89
PHF3-210ENST00000509876 Q6ZVQ6 151 aa3.26□□□□□ -1.89
PHF3-210ENST00000509876 RETNLBQ9BQ08 111 aa3.26□□□□□ -1.89
PHF3-210ENST00000509876 DEFB116Q30KQ4 102 aa3.26□□□□□ -1.89
PHF3-210ENST00000509876 DMXL1Q9Y485 3027 aa3.25□□□□□ -1.89
PHF3-210ENST00000509876 SPINK1P00995 79 aa3.25□□□□□ -1.89
PHF3-210ENST00000509876 FLNCQ14315 2725 aa3.25□□□□□ -1.89
PHF3-210ENST00000509876 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
PHF3-210ENST00000509876 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 C8orf87E5RJ46 101 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 KRTAP10-1P60331 282 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 KRTAP10-2P60368 255 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 Q6Q795 121 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 DMXL2Q8TDJ6 3036 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 Q96NJ1 140 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 LAMA1P25391 3075 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 USP34Q70CQ2 3546 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 TRBV7-4A0A0J9YYF1 115 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 HCG22E2RYF7 251 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 FAM229BQ4G0N7 80 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 FAM218AQ96MZ4 157 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
PHF3-210ENST00000509876 FAM30AQ9NZY2 134 aa3.24□□□□□ -1.89
PHF3-210ENST00000509876 COL6A5A8TX70 2615 aa3.23□□□□□ -1.89
PHF3-210ENST00000509876 TRBV7-7A0A0K0K1E9 115 aa3.23□□□□□ -1.89
PHF3-210ENST00000509876 PCP4P48539 62 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 ITPR1Q14643 2758 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 ITPR2Q14571 2701 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 IMUPQ9GZP8 106 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 HIVEP1P15822 2718 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 ANAPC11Q9NYG5 84 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 CXCL6P80162 114 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 TEX15Q9BXT5 2789 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 APCP25054 2843 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 UTP20O75691 2785 aaKnown RBP3.22□□□□□ -1.89
PHF3-210ENST00000509876 FRYLO94915 3013 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 hDV103S1A0JD37 113 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
PHF3-210ENST00000509876 IGFL1Q6UW32 110 aa3.21□□□□□ -1.89
PHF3-210ENST00000509876 Q8N9L7 120 aa3.21□□□□□ -1.89
PHF3-210ENST00000509876 KRTAP26-1Q6PEX3 210 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 Q6ZQT0 140 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 PRR26Q8N8Z3 221 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 FAM104AQ969W3 186 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 VCANP13611 3396 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 CD164Q04900 197 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 TMEM258P61165 79 aa3.21□□□□□ -1.9
PHF3-210ENST00000509876 DNAH14Q0VDD8 3507 aa3.2□□□□□ -1.9
PHF3-210ENST00000509876 SETXQ7Z333 2677 aaKnown RBP3.2□□□□□ -1.9
PHF3-210ENST00000509876 IGKV2D-30A0A075B6S6 120 aa3.2□□□□□ -1.9
PHF3-210ENST00000509876 C9orf92A6NGG3 77 aa3.2□□□□□ -1.9
PHF3-210ENST00000509876 IGKV2-30P06310 120 aa3.2□□□□□ -1.9
PHF3-210ENST00000509876 Q8N377 158 aa3.2□□□□□ -1.9
PHF3-210ENST00000509876 VPS13AQ96RL7 3174 aa3.2□□□□□ -1.9
PHF3-210ENST00000509876 UQCRQO14949 82 aa3.19□□□□□ -1.9
PHF3-210ENST00000509876 IGLV7-46A0A075B6I9 117 aa3.19□□□□□ -1.9
PHF3-210ENST00000509876 A8MWP4 228 aa3.19□□□□□ -1.9
PHF3-210ENST00000509876 H0Y9P7 68 aa3.19□□□□□ -1.9
PHF3-210ENST00000509876 ERC2-IT1O76042 136 aa3.19□□□□□ -1.9
PHF3-210ENST00000509876 STAB1Q9NY15 2570 aa3.19□□□□□ -1.9
PHF3-210ENST00000509876 MT-ATP8P03928 68 aa3.19□□□□□ -1.9
PHF3-210ENST00000509876 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
PHF3-210ENST00000509876 Q6ZRN7 208 aaPredicted RBP3.18□□□□□ -1.9
PHF3-210ENST00000509876 ATMQ13315 3056 aa3.18□□□□□ -1.9
PHF3-210ENST00000509876 NDUFC1O43677 76 aa3.18□□□□□ -1.9
PHF3-210ENST00000509876 EIF4EBP3O60516 100 aaPredicted RBP3.18□□□□□ -1.9
PHF3-210ENST00000509876 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
PHF3-210ENST00000509876 OBSCN-AS1Q96MR7 158 aa3.18□□□□□ -1.9
PHF3-210ENST00000509876 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
PHF3-210ENST00000509876 OXTP01178 125 aa3.17□□□□□ -1.9
PHF3-210ENST00000509876 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
PHF3-210ENST00000509876 DSCR10P59022 87 aa3.17□□□□□ -1.9
PHF3-210ENST00000509876 C5orf47Q569G3 176 aa3.17□□□□□ -1.9
PHF3-210ENST00000509876 SERP1Q9Y6X1 66 aa3.17□□□□□ -1.9
PHF3-210ENST00000509876 SERP2Q8N6R1 65 aa3.17□□□□□ -1.9
PHF3-210ENST00000509876 MYO15AQ9UKN7 3530 aa3.16□□□□□ -1.9
PHF3-210ENST00000509876 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
PHF3-210ENST00000509876 TRAV7A0A075B6U4 112 aa3.16□□□□□ -1.9
PHF3-210ENST00000509876 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
PHF3-210ENST00000509876 C7orf65Q6ZTY9 151 aa3.16□□□□□ -1.9
PHF3-210ENST00000509876 MRPL34Q9BQ48 92 aaKnown RBP3.16□□□□□ -1.9
PHF3-210ENST00000509876 ATP5EP56381 51 aaPredicted RBP3.16□□□□□ -1.9
PHF3-210ENST00000509876 NBEAQ8NFP9 2946 aa3.16□□□□□ -1.9
PHF3-210ENST00000509876 COL12A1Q99715 3063 aa3.15□□□□□ -1.9
PHF3-210ENST00000509876 SMIM29Q86T20 159 aa3.15□□□□□ -1.9
PHF3-210ENST00000509876 KALRNO60229 2985 aa3.15□□□□□ -1.91
PHF3-210ENST00000509876 IGLV5-48A0A075B6I7 105 aa3.15□□□□□ -1.91
PHF3-210ENST00000509876 RBM12B-AS1Q9P1G2 102 aa3.15□□□□□ -1.91
PHF3-210ENST00000509876 SPRR1AP35321 89 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms