RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 Q9BRP9 147 aa8.19□□□□□ -1.1
HMGCS1-203ENST00000507004 IGLV9-49A0A0B4J1Y8 123 aa8.18□□□□□ -1.1
HMGCS1-203ENST00000507004 SYS1-DBNDD2H3BUS1 97 aa8.18□□□□□ -1.1
HMGCS1-203ENST00000507004 SLC25A20O43772 301 aa8.18□□□□□ -1.1
HMGCS1-203ENST00000507004 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
HMGCS1-203ENST00000507004 SLC25A34Q6PIV7 304 aa8.18□□□□□ -1.1
HMGCS1-203ENST00000507004 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
HMGCS1-203ENST00000507004 PET117Q6UWS5 81 aa8.17□□□□□ -1.1
HMGCS1-203ENST00000507004 KRTAP13-3Q3SY46 172 aa8.16□□□□□ -1.1
HMGCS1-203ENST00000507004 ADAMTSL4-AS1Q5T5F5 129 aa8.15□□□□□ -1.1
HMGCS1-203ENST00000507004 SOSTDC1Q6X4U4 206 aa8.15□□□□□ -1.1
HMGCS1-203ENST00000507004 SLC7A5P1Q8MH63 180 aa8.15□□□□□ -1.1
HMGCS1-203ENST00000507004 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
HMGCS1-203ENST00000507004 MUC17Q685J3 4493 aa8.15□□□□□ -1.1
HMGCS1-203ENST00000507004 C9orf153Q5TBE3 101 aa8.14□□□□□ -1.11
HMGCS1-203ENST00000507004 LINC01545Q5VT33 79 aa8.14□□□□□ -1.11
HMGCS1-203ENST00000507004 LINC00308Q8TCZ7 52 aa8.14□□□□□ -1.11
HMGCS1-203ENST00000507004 COPS9Q8WXC6 57 aa8.14□□□□□ -1.11
HMGCS1-203ENST00000507004 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
HMGCS1-203ENST00000507004 DHRS4-AS1Q9P1J3 65 aa8.14□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BKO60814 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BJP06899 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BOP23527 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BBP33778 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BDP58876 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 SEC61BP60468 96 aaKnown RBP8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 NPC2P61916 151 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BCP62807 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST2H2BEQ16778 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 Q8N377 158 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BHQ93079 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BNQ99877 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 HIST1H2BMQ99879 126 aa8.13□□□□□ -1.11
HMGCS1-203ENST00000507004 AKR1D1P51857 326 aa8.12□□□□□ -1.11
HMGCS1-203ENST00000507004 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
HMGCS1-203ENST00000507004 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
HMGCS1-203ENST00000507004 ZNF815PA8K554 130 aa8.11□□□□□ -1.11
HMGCS1-203ENST00000507004 SPRR1BP22528 89 aa8.11□□□□□ -1.11
HMGCS1-203ENST00000507004 LCE2AQ5TA79 106 aaPredicted RBP8.11□□□□□ -1.11
HMGCS1-203ENST00000507004 LITAFQ99732 161 aa8.11□□□□□ -1.11
HMGCS1-203ENST00000507004 LIMD2Q9BT23 127 aa8.1□□□□□ -1.11
HMGCS1-203ENST00000507004 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
HMGCS1-203ENST00000507004 C20orf202A1L168 122 aa8.09□□□□□ -1.11
HMGCS1-203ENST00000507004 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
HMGCS1-203ENST00000507004 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
HMGCS1-203ENST00000507004 COA6Q5JTJ3 125 aaKnown RBP8.07□□□□□ -1.12
HMGCS1-203ENST00000507004 Q6ZVH6 145 aa8.07□□□□□ -1.12
HMGCS1-203ENST00000507004 ST20-AS1Q8NBB2 130 aa8.07□□□□□ -1.12
HMGCS1-203ENST00000507004 TRBV7-6A0A0J9YX20 115 aa8.06□□□□□ -1.12
HMGCS1-203ENST00000507004 IFITM1P13164 125 aa8.06□□□□□ -1.12
HMGCS1-203ENST00000507004 COX7BP24311 80 aa8.06□□□□□ -1.12
HMGCS1-203ENST00000507004 ELOF1P60002 83 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-203ENST00000507004 SCGB1D4Q6XE38 83 aa8.06□□□□□ -1.12
HMGCS1-203ENST00000507004 C3orf79P0CE67 100 aa8.05□□□□□ -1.12
HMGCS1-203ENST00000507004 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
HMGCS1-203ENST00000507004 KRTDAPP60985 99 aa8.03□□□□□ -1.12
HMGCS1-203ENST00000507004 CD164Q04900 197 aa8.03□□□□□ -1.12
HMGCS1-203ENST00000507004 TAL2Q16559 108 aa8.03□□□□□ -1.12
HMGCS1-203ENST00000507004 XP32Q5T750 250 aa8.03□□□□□ -1.12
HMGCS1-203ENST00000507004 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
HMGCS1-203ENST00000507004 A0A1B0GWB2 263 aa8.02□□□□□ -1.13
HMGCS1-203ENST00000507004 A4D1N5 150 aa8.02□□□□□ -1.13
HMGCS1-203ENST00000507004 SNRPEP62304 92 aaKnown RBP8.02□□□□□ -1.13
HMGCS1-203ENST00000507004 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
HMGCS1-203ENST00000507004 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
HMGCS1-203ENST00000507004 KRTAP9-2Q9BYQ4 174 aa8□□□□□ -1.13
HMGCS1-203ENST00000507004 NHP2Q9NX24 153 aaKnown RBP8□□□□□ -1.13
HMGCS1-203ENST00000507004 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
HMGCS1-203ENST00000507004 TRAV13-2A0A0B4J235 113 aa7.98□□□□□ -1.13
HMGCS1-203ENST00000507004 A6NDN8 102 aa7.98□□□□□ -1.13
HMGCS1-203ENST00000507004 Q5XG85 94 aa7.97□□□□□ -1.13
HMGCS1-203ENST00000507004 H7C2G1 150 aa7.96□□□□□ -1.14
HMGCS1-203ENST00000507004 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.14
HMGCS1-203ENST00000507004 IGLV5-48A0A075B6I7 105 aa7.95□□□□□ -1.14
HMGCS1-203ENST00000507004 ANKRD39Q53RE8 183 aa7.95□□□□□ -1.14
HMGCS1-203ENST00000507004 Q1RN00 199 aa7.94□□□□□ -1.14
HMGCS1-203ENST00000507004 HRCT1Q6UXD1 115 aa7.94□□□□□ -1.14
HMGCS1-203ENST00000507004 MUSTN1Q8IVN3 82 aa7.94□□□□□ -1.14
HMGCS1-203ENST00000507004 VAMP3Q15836 100 aa7.93□□□□□ -1.14
HMGCS1-203ENST00000507004 PCP2Q8IVA1 136 aa7.91□□□□□ -1.14
HMGCS1-203ENST00000507004 HSBP1L1C9JCN9 74 aa7.9□□□□□ -1.14
HMGCS1-203ENST00000507004 SMIM29Q86T20 159 aa7.9□□□□□ -1.14
HMGCS1-203ENST00000507004 ATOH7Q8N100 152 aa7.9□□□□□ -1.14
HMGCS1-203ENST00000507004 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
HMGCS1-203ENST00000507004 F8WEM9 126 aa7.88□□□□□ -1.15
HMGCS1-203ENST00000507004 TCL1BO95988 128 aa7.88□□□□□ -1.15
HMGCS1-203ENST00000507004 S100A2P29034 98 aa7.88□□□□□ -1.15
HMGCS1-203ENST00000507004 SMIM11BQ8TCY0 68 aa7.88□□□□□ -1.15
HMGCS1-203ENST00000507004 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
HMGCS1-203ENST00000507004 PCOTHQ58A44 107 aa7.84□□□□□ -1.15
HMGCS1-203ENST00000507004 C1orf195Q5TG92 126 aa7.84□□□□□ -1.15
HMGCS1-203ENST00000507004 Q6JHZ5 121 aa7.84□□□□□ -1.15
HMGCS1-203ENST00000507004 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
HMGCS1-203ENST00000507004 hADV29S1A0JD25 119 aa7.82□□□□□ -1.16
HMGCS1-203ENST00000507004 LINC00575Q6W349 94 aa7.82□□□□□ -1.16
HMGCS1-203ENST00000507004 HIST3H2BBQ8N257 126 aa7.82□□□□□ -1.16
HMGCS1-203ENST00000507004 PPDPFLQ8WWR9 84 aa7.82□□□□□ -1.16
HMGCS1-203ENST00000507004 HIST1H2BLQ99880 126 aa7.82□□□□□ -1.16
HMGCS1-203ENST00000507004 S100A6P06703 90 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms