RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ATXN8Q156A1 80 aa3.17□□□□□ -1.9
NIPBL-205ENST00000505998 TIMM8BQ9Y5J9 83 aaPredicted RBP3.17□□□□□ -1.9
NIPBL-205ENST00000505998 U3KQK5 164 aa3.17□□□□□ -1.9
NIPBL-205ENST00000505998 TRBV27A0A0K0K1C4 114 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 A0A1B0GXF2 115 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 H3BNG1 76 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 UBE2L6O14933 153 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 TIMM17BO60830 172 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 FXYD7P58549 80 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 HBBP68871 147 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 SDIM1Q6ZPB5 146 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 TENM2Q9NT68 2774 aa3.16□□□□□ -1.9
NIPBL-205ENST00000505998 GNRH2O43555 120 aa3.15□□□□□ -1.91
NIPBL-205ENST00000505998 NDUFC1O43677 76 aa3.15□□□□□ -1.91
NIPBL-205ENST00000505998 BCE1O60756 84 aa3.15□□□□□ -1.91
NIPBL-205ENST00000505998 ARMS2P0C7Q2 107 aa3.15□□□□□ -1.91
NIPBL-205ENST00000505998 SPART-AS1P0CW21 52 aa3.15□□□□□ -1.91
NIPBL-205ENST00000505998 FAM222AQ5U5X8 452 aa3.15□□□□□ -1.91
NIPBL-205ENST00000505998 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
NIPBL-205ENST00000505998 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
NIPBL-205ENST00000505998 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
NIPBL-205ENST00000505998 ZNF73O43830 326 aaPredicted RBP3.14□□□□□ -1.91
NIPBL-205ENST00000505998 PRM2P04554 102 aa3.14□□□□□ -1.91
NIPBL-205ENST00000505998 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
NIPBL-205ENST00000505998 IGFL1Q6UW32 110 aa3.14□□□□□ -1.91
NIPBL-205ENST00000505998 Q6ZTI0 123 aa3.14□□□□□ -1.91
NIPBL-205ENST00000505998 Q8N8P6 123 aa3.14□□□□□ -1.91
NIPBL-205ENST00000505998 KMT2AQ03164 3969 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 TEX49A0A1B0GTD5 131 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 TRBV6-4A0A1B0GX49 114 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 IBA57-AS1B1ANH7 110 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 M0R378 163 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 IGHV3-53P01767 116 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 FCER1GP30273 86 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 UBE2BP63146 152 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 SS18Q15532 418 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 NOP10Q9NPE3 64 aaKnown RBP3.13□□□□□ -1.91
NIPBL-205ENST00000505998 SACSQ9NZJ4 4579 aa3.13□□□□□ -1.91
NIPBL-205ENST00000505998 TRAV10A0A0B4J240 114 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 TRBV10-1A0A0K0K1A3 114 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 TRBV6-5A0A0K0K1A5 114 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 A0A1B0GUT8 65 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 NUPR2A6NF83 97 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 C3orf84H3BNL1 204 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 TMEM256-PLSCR3K7ERE1 68 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 M0R381 172 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 CCKP06307 115 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 IFI27P40305 119 aaPredicted RBP3.12□□□□□ -1.91
NIPBL-205ENST00000505998 Q6JHZ5 121 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 LYZL1Q6UWQ5 148 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 C2orf82Q6UX34 121 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 LCA10Q71F78 164 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 DAND5Q8N907 189 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 MUC7Q8TAX7 377 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 PHLDA3Q9Y5J5 127 aa3.12□□□□□ -1.91
NIPBL-205ENST00000505998 KMT2CQ8NEZ4 4911 aaKnown RBP3.12□□□□□ -1.91
NIPBL-205ENST00000505998 FRAS1Q86XX4 4008 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 RYR2Q92736 4967 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 IGLV2-18A0A075B6J9 118 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 IGKV2D-26A0A0A0MRZ7 120 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 TRGV1A0A0A0MS02 117 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 H7BZZ5 65 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 M0QY20 66 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 DEFB4AO15263 64 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 S100A4P26447 101 aaKnown RBP3.11□□□□□ -1.91
NIPBL-205ENST00000505998 CKS2P33552 79 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 RBM3P98179 157 aaKnown RBP3.11□□□□□ -1.91
NIPBL-205ENST00000505998 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
NIPBL-205ENST00000505998 TOMM6Q96B49 74 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 C8orf17Q9NRJ1 99 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 PRO1854Q9UHT4 67 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 PRO0255Q9UI72 69 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 LINC00588Q9Y4M8 146 aa3.11□□□□□ -1.91
NIPBL-205ENST00000505998 DEFB131BA0A096LNP1 70 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 TRAV13-2A0A0B4J235 113 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 TRBV30A0A0K0K1B3 111 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 PLNP26678 52 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 XCL1P47992 114 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 KLKP1Q107X0 134 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 RHOHQ15669 191 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 RNASE13Q5GAN3 156 aaKnown RBP3.1□□□□□ -1.91
NIPBL-205ENST00000505998 SPANXN1Q5VSR9 72 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 ATP5EP2Q5VTU8 51 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 SLC25A29Q8N8R3 303 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 CHCHD7Q9BUK0 85 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 APLNQ9ULZ1 77 aa3.1□□□□□ -1.91
NIPBL-205ENST00000505998 TRGV2A0A075B6R0 118 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 A0A096LPF7 62 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 LINC01546A6NGU7 62 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 A8MUN3 132 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 LST1O00453 97 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 INAFM2P0DMQ5 153 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 DEFB130BP0DP73 79 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 DEFB130AP0DP74 79 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 HTN1P15515 57 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 ZNF22P17026 224 aaPredicted RBP3.09□□□□□ -1.91
NIPBL-205ENST00000505998 POLR2KP53803 58 aaKnown RBP3.09□□□□□ -1.91
NIPBL-205ENST00000505998 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 C7orf65Q6ZTY9 151 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms