RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SEC61BP60468 96 aaKnown RBP13.82□□□□□ -0.2
HERC4-212ENST00000505760 NPC2P61916 151 aa13.82□□□□□ -0.2
HERC4-212ENST00000505760 C9orf153Q5TBE3 101 aa13.81□□□□□ -0.2
HERC4-212ENST00000505760 ZNF73O43830 326 aaPredicted RBP13.8□□□□□ -0.2
HERC4-212ENST00000505760 SOSTDC1Q6X4U4 206 aa13.79□□□□□ -0.2
HERC4-212ENST00000505760 A0A0J9YXY3 114 aa13.78□□□□□ -0.2
HERC4-212ENST00000505760 ADAMTSL4-AS1Q5T5F5 129 aa13.78□□□□□ -0.2
HERC4-212ENST00000505760 EIF4EBP3O60516 100 aaPredicted RBP13.77□□□□□ -0.21
HERC4-212ENST00000505760 HINT1P49773 126 aaPredicted RBP13.75□□□□□ -0.21
HERC4-212ENST00000505760 CBY1Q9Y3M2 126 aa13.75□□□□□ -0.21
HERC4-212ENST00000505760 E9PLD3 99 aa13.74□□□□□ -0.21
HERC4-212ENST00000505760 ST20-AS1Q8NBB2 130 aa13.74□□□□□ -0.21
HERC4-212ENST00000505760 LINC01547P58512 204 aaPredicted RBP13.73□□□□□ -0.21
HERC4-212ENST00000505760 KRTAP4-1Q9BYQ7 146 aa13.72□□□□□ -0.21
HERC4-212ENST00000505760 C5orf52A6NGY3 159 aa13.71□□□□□ -0.21
HERC4-212ENST00000505760 COLCA2A8K830 154 aa13.69□□□□□ -0.22
HERC4-212ENST00000505760 OR13C6PQ8NH95 151 aa13.69□□□□□ -0.22
HERC4-212ENST00000505760 SPANXCQ9NY87 97 aa13.68□□□□□ -0.22
HERC4-212ENST00000505760 XP32Q5T750 250 aa13.67□□□□□ -0.22
HERC4-212ENST00000505760 LINC00308Q8TCZ7 52 aa13.67□□□□□ -0.22
HERC4-212ENST00000505760 SYS1-DBNDD2H3BUS1 97 aa13.65□□□□□ -0.22
HERC4-212ENST00000505760 SLC25A34Q6PIV7 304 aa13.65□□□□□ -0.22
HERC4-212ENST00000505760 LITAFQ99732 161 aa13.65□□□□□ -0.22
HERC4-212ENST00000505760 KRTAP9-6A0A140TA67 174 aa13.64□□□□□ -0.23
HERC4-212ENST00000505760 DHRS4-AS1Q9P1J3 65 aa13.64□□□□□ -0.23
HERC4-212ENST00000505760 TIMM17BO60830 172 aa13.62□□□□□ -0.23
HERC4-212ENST00000505760 SLC7A5P1Q8MH63 180 aa13.62□□□□□ -0.23
HERC4-212ENST00000505760 SPRR1BP22528 89 aa13.61□□□□□ -0.23
HERC4-212ENST00000505760 LIMD2Q9BT23 127 aa13.61□□□□□ -0.23
HERC4-212ENST00000505760 HRCT1Q6UXD1 115 aa13.6□□□□□ -0.23
HERC4-212ENST00000505760 SPANXDQ9BXN6 97 aa13.6□□□□□ -0.23
HERC4-212ENST00000505760 ZNF815PA8K554 130 aa13.59□□□□□ -0.23
HERC4-212ENST00000505760 LAMTOR3Q9UHA4 124 aa13.59□□□□□ -0.23
HERC4-212ENST00000505760 LINC01545Q5VT33 79 aa13.57□□□□□ -0.24
HERC4-212ENST00000505760 COX7BP24311 80 aa13.56□□□□□ -0.24
HERC4-212ENST00000505760 LINC00518Q8N0U6 118 aa13.56□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BKO60814 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BJP06899 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BOP23527 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BBP33778 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BDP58876 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 ELOF1P60002 83 aaKnown RBP13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BCP62807 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST2H2BEQ16778 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.55□□□□□ -0.24
HERC4-212ENST00000505760 PET117Q6UWS5 81 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BHQ93079 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BNQ99877 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 HIST1H2BMQ99879 126 aa13.55□□□□□ -0.24
HERC4-212ENST00000505760 C6orf99Q4VX62 202 aa13.54□□□□□ -0.24
HERC4-212ENST00000505760 TTTY13Q9BZ97 58 aa13.53□□□□□ -0.24
HERC4-212ENST00000505760 TAL2Q16559 108 aa13.52□□□□□ -0.25
HERC4-212ENST00000505760 DEFB105AQ8NG35 78 aa13.52□□□□□ -0.25
HERC4-212ENST00000505760 Q1RN00 199 aa13.5□□□□□ -0.25
HERC4-212ENST00000505760 C9orf92A6NGG3 77 aa13.49□□□□□ -0.25
HERC4-212ENST00000505760 SCGB1D4Q6XE38 83 aa13.47□□□□□ -0.25
HERC4-212ENST00000505760 PRO1933Q9H354 126 aa13.47□□□□□ -0.25
HERC4-212ENST00000505760 TEX49A0A1B0GTD5 131 aa13.46□□□□□ -0.25
HERC4-212ENST00000505760 C3orf79P0CE67 100 aa13.46□□□□□ -0.25
HERC4-212ENST00000505760 CD164Q04900 197 aa13.46□□□□□ -0.25
HERC4-212ENST00000505760 PCOTHQ58A44 107 aa13.46□□□□□ -0.25
HERC4-212ENST00000505760 TRBV7-6A0A0J9YX20 115 aa13.45□□□□□ -0.26
HERC4-212ENST00000505760 IGLV8-61A0A075B6I0 122 aa13.43□□□□□ -0.26
HERC4-212ENST00000505760 H7C2G1 150 aa13.43□□□□□ -0.26
HERC4-212ENST00000505760 COPS9Q8WXC6 57 aa13.43□□□□□ -0.26
HERC4-212ENST00000505760 KRTDAPP60985 99 aa13.42□□□□□ -0.26
HERC4-212ENST00000505760 LCE2DQ5TA82 110 aaPredicted RBP13.42□□□□□ -0.26
HERC4-212ENST00000505760 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
HERC4-212ENST00000505760 LCE2CQ5TA81 110 aa13.41□□□□□ -0.26
HERC4-212ENST00000505760 A6NDN8 102 aa13.4□□□□□ -0.26
HERC4-212ENST00000505760 AKR1D1P51857 326 aa13.4□□□□□ -0.26
HERC4-212ENST00000505760 IFITM1P13164 125 aa13.38□□□□□ -0.27
HERC4-212ENST00000505760 C20orf202A1L168 122 aa13.37□□□□□ -0.27
HERC4-212ENST00000505760 SMIM29Q86T20 159 aa13.37□□□□□ -0.27
HERC4-212ENST00000505760 IGLV5-48A0A075B6I7 105 aa13.35□□□□□ -0.27
HERC4-212ENST00000505760 KRTAP19-2Q3LHN2 52 aa13.35□□□□□ -0.27
HERC4-212ENST00000505760 ANKRD39Q53RE8 183 aa13.35□□□□□ -0.27
HERC4-212ENST00000505760 Q5XG85 94 aa13.35□□□□□ -0.27
HERC4-212ENST00000505760 Q6ZVH6 145 aa13.35□□□□□ -0.27
HERC4-212ENST00000505760 A0A0G2JQZ4 141 aa13.32□□□□□ -0.28
HERC4-212ENST00000505760 A4D1N5 150 aa13.32□□□□□ -0.28
HERC4-212ENST00000505760 COA6Q5JTJ3 125 aaKnown RBP13.32□□□□□ -0.28
HERC4-212ENST00000505760 C1orf195Q5TG92 126 aa13.32□□□□□ -0.28
HERC4-212ENST00000505760 MUSTN1Q8IVN3 82 aa13.32□□□□□ -0.28
HERC4-212ENST00000505760 ATOH7Q8N100 152 aa13.31□□□□□ -0.28
HERC4-212ENST00000505760 NHP2Q9NX24 153 aaKnown RBP13.3□□□□□ -0.28
HERC4-212ENST00000505760 MT1HP80294 61 aa13.29□□□□□ -0.28
HERC4-212ENST00000505760 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
HERC4-212ENST00000505760 PCP2Q8IVA1 136 aa13.28□□□□□ -0.28
HERC4-212ENST00000505760 SMIM11BQ8TCY0 68 aa13.26□□□□□ -0.29
HERC4-212ENST00000505760 CFC1BP0CG36 223 aa13.24□□□□□ -0.29
HERC4-212ENST00000505760 TCL1BO95988 128 aa13.23□□□□□ -0.29
HERC4-212ENST00000505760 FSIP2Q5CZC0 6907 aa13.23□□□□□ -0.29
HERC4-212ENST00000505760 RPL37P61927 97 aaKnown RBP13.21□□□□□ -0.29
HERC4-212ENST00000505760 CRCT1Q9UGL9 99 aa13.21□□□□□ -0.29
HERC4-212ENST00000505760 F8WEM9 126 aa13.2□□□□□ -0.3
HERC4-212ENST00000505760 VAMP3Q15836 100 aa13.19□□□□□ -0.3
HERC4-212ENST00000505760 SNRPEP62304 92 aaKnown RBP13.17□□□□□ -0.3
HERC4-212ENST00000505760 LINC00575Q6W349 94 aa13.13□□□□□ -0.31
HERC4-212ENST00000505760 COX6B2Q6YFQ2 88 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms