RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SPRR1AP35321 89 aa12.59□□□□□ -0.39
CDC42SE2-206ENST00000503291 RYR1P21817 5038 aa12.58□□□□□ -0.39
CDC42SE2-206ENST00000503291 HSPG2P98160 4391 aa12.58□□□□□ -0.4
CDC42SE2-206ENST00000503291 C1orf137Q5JT78 98 aa12.58□□□□□ -0.4
CDC42SE2-206ENST00000503291 C6orf99Q4VX62 202 aa12.57□□□□□ -0.4
CDC42SE2-206ENST00000503291 Q1RN00 199 aa12.56□□□□□ -0.4
CDC42SE2-206ENST00000503291 FAT1Q14517 4588 aa12.56□□□□□ -0.4
CDC42SE2-206ENST00000503291 KRTAP4-16G5E9R7 235 aaPredicted RBP12.55□□□□□ -0.4
CDC42SE2-206ENST00000503291 BCE1O60756 84 aa12.55□□□□□ -0.4
CDC42SE2-206ENST00000503291 RPL28P46779 137 aaKnown RBP12.55□□□□□ -0.4
CDC42SE2-206ENST00000503291 RPL37AP61513 92 aaKnown RBP12.55□□□□□ -0.4
CDC42SE2-206ENST00000503291 DIRC1Q969H9 104 aa12.55□□□□□ -0.4
CDC42SE2-206ENST00000503291 BIRC6Q9NR09 4857 aa12.54□□□□□ -0.4
CDC42SE2-206ENST00000503291 FAM229AH3BQW9 127 aa12.53□□□□□ -0.4
CDC42SE2-206ENST00000503291 TSPAN13O95857 204 aa12.53□□□□□ -0.4
CDC42SE2-206ENST00000503291 FAM19A1Q7Z5A9 133 aa12.53□□□□□ -0.4
CDC42SE2-206ENST00000503291 ETDCA0A1B0GVM5 59 aa12.52□□□□□ -0.4
CDC42SE2-206ENST00000503291 KRTAP17-1Q9BYP8 105 aa12.51□□□□□ -0.41
CDC42SE2-206ENST00000503291 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
CDC42SE2-206ENST00000503291 B5MCH6 92 aa12.5□□□□□ -0.41
CDC42SE2-206ENST00000503291 PRLHP81277 87 aa12.5□□□□□ -0.41
CDC42SE2-206ENST00000503291 IGLV7-43P04211 117 aa12.5□□□□□ -0.41
CDC42SE2-206ENST00000503291 UBE2AP49459 152 aa12.49□□□□□ -0.41
CDC42SE2-206ENST00000503291 TRBV7-6A0A0J9YX20 115 aa12.48□□□□□ -0.41
CDC42SE2-206ENST00000503291 KRTAP10-4P60372 401 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE2-206ENST00000503291 Q5VSD8 79 aa12.48□□□□□ -0.41
CDC42SE2-206ENST00000503291 Q6ZRX8 168 aa12.48□□□□□ -0.41
CDC42SE2-206ENST00000503291 Q8N1X5 172 aa12.48□□□□□ -0.41
CDC42SE2-206ENST00000503291 TRIAP1O43715 76 aa12.47□□□□□ -0.41
CDC42SE2-206ENST00000503291 COX7BP24311 80 aa12.47□□□□□ -0.41
CDC42SE2-206ENST00000503291 PSMB2P49721 201 aa12.47□□□□□ -0.41
CDC42SE2-206ENST00000503291 ELOF1P60002 83 aaKnown RBP12.47□□□□□ -0.41
CDC42SE2-206ENST00000503291 VAMP3Q15836 100 aa12.47□□□□□ -0.41
CDC42SE2-206ENST00000503291 KRTAP13-1Q8IUC0 172 aa12.47□□□□□ -0.41
CDC42SE2-206ENST00000503291 PLA2G1BP04054 148 aaKnown RBP12.47□□□□□ -0.41
CDC42SE2-206ENST00000503291 COL5A1-AS1Q5SY13 56 aa12.46□□□□□ -0.41
CDC42SE2-206ENST00000503291 H0Y9J4 135 aa12.45□□□□□ -0.42
CDC42SE2-206ENST00000503291 ZNF861PO60384 105 aa12.45□□□□□ -0.42
CDC42SE2-206ENST00000503291 NAA38Q9BRA0 125 aaKnown RBP12.45□□□□□ -0.42
CDC42SE2-206ENST00000503291 SRRM2Q9UQ35 2752 aaKnown RBP12.45□□□□□ -0.42
CDC42SE2-206ENST00000503291 TAX1BP3O14907 124 aa12.45□□□□□ -0.42
CDC42SE2-206ENST00000503291 Q9BRP9 147 aa12.44□□□□□ -0.42
CDC42SE2-206ENST00000503291 HIGD2AQ9BW72 106 aa12.43□□□□□ -0.42
CDC42SE2-206ENST00000503291 COX6CP09669 75 aa12.42□□□□□ -0.42
CDC42SE2-206ENST00000503291 H0YGX0 51 aa12.41□□□□□ -0.42
CDC42SE2-206ENST00000503291 SMCR5Q8TEV8 140 aa12.41□□□□□ -0.42
CDC42SE2-206ENST00000503291 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
CDC42SE2-206ENST00000503291 H3BUT2 72 aa12.4□□□□□ -0.42
CDC42SE2-206ENST00000503291 SCGB1C2P0DMR2 95 aa12.4□□□□□ -0.42
CDC42SE2-206ENST00000503291 LINC00575Q6W349 94 aa12.39□□□□□ -0.43
CDC42SE2-206ENST00000503291 INAFM2P0DMQ5 153 aa12.38□□□□□ -0.43
CDC42SE2-206ENST00000503291 DHRS4-AS1Q9P1J3 65 aa12.38□□□□□ -0.43
CDC42SE2-206ENST00000503291 ERC2-IT1O76042 136 aa12.37□□□□□ -0.43
CDC42SE2-206ENST00000503291 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
CDC42SE2-206ENST00000503291 FAM218AQ96MZ4 157 aa12.37□□□□□ -0.43
CDC42SE2-206ENST00000503291 SLC25A20O43772 301 aa12.36□□□□□ -0.43
CDC42SE2-206ENST00000503291 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
CDC42SE2-206ENST00000503291 hADV29S1A0JD25 119 aa12.34□□□□□ -0.43
CDC42SE2-206ENST00000503291 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
CDC42SE2-206ENST00000503291 KRTAP4-5Q9BYR2 181 aa12.31□□□□□ -0.44
CDC42SE2-206ENST00000503291 SNCGO76070 127 aa12.3□□□□□ -0.44
CDC42SE2-206ENST00000503291 LYRM7Q5U5X0 104 aa12.3□□□□□ -0.44
CDC42SE2-206ENST00000503291 ST20-AS1Q8NBB2 130 aa12.3□□□□□ -0.44
CDC42SE2-206ENST00000503291 HERC2O95714 4834 aa12.29□□□□□ -0.44
CDC42SE2-206ENST00000503291 A0A1B0GX51 115 aa12.28□□□□□ -0.44
CDC42SE2-206ENST00000503291 FABP2P12104 132 aa12.28□□□□□ -0.44
CDC42SE2-206ENST00000503291 TCL1BO95988 128 aa12.28□□□□□ -0.44
CDC42SE2-206ENST00000503291 LST1O00453 97 aa12.27□□□□□ -0.45
CDC42SE2-206ENST00000503291 Q6ZQY7 126 aa12.27□□□□□ -0.45
CDC42SE2-206ENST00000503291 SPRR4Q96PI1 79 aa12.25□□□□□ -0.45
CDC42SE2-206ENST00000503291 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE2-206ENST00000503291 TRBV20-1A0A075B6N2 111 aa12.24□□□□□ -0.45
CDC42SE2-206ENST00000503291 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.24□□□□□ -0.45
CDC42SE2-206ENST00000503291 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
CDC42SE2-206ENST00000503291 ATXN8Q156A1 80 aa12.23□□□□□ -0.45
CDC42SE2-206ENST00000503291 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
CDC42SE2-206ENST00000503291 TRACP01848 142 aa12.23□□□□□ -0.45
CDC42SE2-206ENST00000503291 DNAL4O96015 105 aa12.22□□□□□ -0.45
CDC42SE2-206ENST00000503291 ANAPC11Q9NYG5 84 aa12.21□□□□□ -0.45
CDC42SE2-206ENST00000503291 KRTAP1-4P0C5Y4 121 aa12.21□□□□□ -0.46
CDC42SE2-206ENST00000503291 LINC01547P58512 204 aaPredicted RBP12.21□□□□□ -0.46
CDC42SE2-206ENST00000503291 SPCS1Q9Y6A9 102 aa12.21□□□□□ -0.46
CDC42SE2-206ENST00000503291 IGLV5-48A0A075B6I7 105 aa12.2□□□□□ -0.46
CDC42SE2-206ENST00000503291 TEX49A0A1B0GTD5 131 aa12.18□□□□□ -0.46
CDC42SE2-206ENST00000503291 Q8N377 158 aa12.18□□□□□ -0.46
CDC42SE2-206ENST00000503291 LINC00483Q53H64 154 aa12.18□□□□□ -0.46
CDC42SE2-206ENST00000503291 OCIAD2Q56VL3 154 aa12.17□□□□□ -0.46
CDC42SE2-206ENST00000503291 H3BMG7 143 aa12.16□□□□□ -0.46
CDC42SE2-206ENST00000503291 SPRR1BP22528 89 aa12.16□□□□□ -0.46
CDC42SE2-206ENST00000503291 PKHD1L1Q86WI1 4243 aa12.16□□□□□ -0.46
CDC42SE2-206ENST00000503291 ORMDL1Q9P0S3 153 aa12.15□□□□□ -0.46
CDC42SE2-206ENST00000503291 FLG2Q5D862 2391 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE2-206ENST00000503291 K7EP34 96 aa12.13□□□□□ -0.47
CDC42SE2-206ENST00000503291 GHRHP01286 108 aa12.13□□□□□ -0.47
CDC42SE2-206ENST00000503291 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
CDC42SE2-206ENST00000503291 PPDPFLQ8WWR9 84 aa12.12□□□□□ -0.47
CDC42SE2-206ENST00000503291 A0A087X002 238 aa12.11□□□□□ -0.47
CDC42SE2-206ENST00000503291 C9JAW5 83 aa12.11□□□□□ -0.47
CDC42SE2-206ENST00000503291 FAM229BQ4G0N7 80 aa12.11□□□□□ -0.47
CDC42SE2-206ENST00000503291 SMIM29Q86T20 159 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 486.7 ms