RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 IGLV1-50A0A075B6I6 118 aa9.71□□□□□ -0.86
SCLT1-204ENST00000503215 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.86
SCLT1-204ENST00000503215 ZNF861PO60384 105 aa9.71□□□□□ -0.86
SCLT1-204ENST00000503215 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
SCLT1-204ENST00000503215 CXCL5P42830 114 aa9.7□□□□□ -0.86
SCLT1-204ENST00000503215 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
SCLT1-204ENST00000503215 ETDBQ3ZM63 59 aa9.69□□□□□ -0.86
SCLT1-204ENST00000503215 PPDPFLQ8WWR9 84 aa9.69□□□□□ -0.86
SCLT1-204ENST00000503215 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
SCLT1-204ENST00000503215 K7ERJ3 54 aa9.66□□□□□ -0.86
SCLT1-204ENST00000503215 BCE1O60756 84 aa9.65□□□□□ -0.86
SCLT1-204ENST00000503215 TEN1Q86WV5 123 aa9.65□□□□□ -0.86
SCLT1-204ENST00000503215 TSPAN13O95857 204 aa9.64□□□□□ -0.87
SCLT1-204ENST00000503215 IGLV5-39A0A0G2JS06 123 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 ZNF22P17026 224 aaPredicted RBP9.63□□□□□ -0.87
SCLT1-204ENST00000503215 HERVK_113P61574 105 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 A0A087X002 238 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 PFN2P35080 140 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 ANAPC11Q9NYG5 84 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 ERG28Q9UKR5 140 aa9.63□□□□□ -0.87
SCLT1-204ENST00000503215 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
SCLT1-204ENST00000503215 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
SCLT1-204ENST00000503215 RPL28P46779 137 aaKnown RBP9.61□□□□□ -0.87
SCLT1-204ENST00000503215 Q6Q795 121 aa9.61□□□□□ -0.87
SCLT1-204ENST00000503215 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
SCLT1-204ENST00000503215 C11orf86A6NJI1 115 aa9.6□□□□□ -0.87
SCLT1-204ENST00000503215 KRTAP13-1Q8IUC0 172 aa9.6□□□□□ -0.87
SCLT1-204ENST00000503215 Q8NDZ9 215 aa9.6□□□□□ -0.87
SCLT1-204ENST00000503215 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
SCLT1-204ENST00000503215 TTTY13Q9BZ97 58 aa9.6□□□□□ -0.87
SCLT1-204ENST00000503215 NKAPP1Q8N9T2 125 aa9.59□□□□□ -0.87
SCLT1-204ENST00000503215 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
SCLT1-204ENST00000503215 IGKV2-28A0A075B6P5 120 aa9.58□□□□□ -0.88
SCLT1-204ENST00000503215 IGKV2D-28P01615 120 aa9.58□□□□□ -0.88
SCLT1-204ENST00000503215 PRR4Q16378 134 aa9.58□□□□□ -0.88
SCLT1-204ENST00000503215 ZNF815PA8K554 130 aa9.57□□□□□ -0.88
SCLT1-204ENST00000503215 VPREB1P12018 145 aa9.57□□□□□ -0.88
SCLT1-204ENST00000503215 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
SCLT1-204ENST00000503215 SCGB1D4Q6XE38 83 aa9.56□□□□□ -0.88
SCLT1-204ENST00000503215 SCGB1C2P0DMR2 95 aa9.55□□□□□ -0.88
SCLT1-204ENST00000503215 UBE2AP49459 152 aa9.55□□□□□ -0.88
SCLT1-204ENST00000503215 PSMB2P49721 201 aa9.55□□□□□ -0.88
SCLT1-204ENST00000503215 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
SCLT1-204ENST00000503215 TMEM170BQ5T4T1 132 aa9.55□□□□□ -0.88
SCLT1-204ENST00000503215 CRYGAP11844 174 aa9.54□□□□□ -0.88
SCLT1-204ENST00000503215 PRO1854Q9UHT4 67 aa9.54□□□□□ -0.88
SCLT1-204ENST00000503215 PRLHP81277 87 aa9.53□□□□□ -0.88
SCLT1-204ENST00000503215 TYMSOSQ8TAI1 123 aa9.53□□□□□ -0.88
SCLT1-204ENST00000503215 A0A0B4J2C4 111 aa9.52□□□□□ -0.88
SCLT1-204ENST00000503215 LOC107984156A0A0G2JMH3 177 aa9.52□□□□□ -0.88
SCLT1-204ENST00000503215 ARL17AQ8IVW1 177 aa9.52□□□□□ -0.88
SCLT1-204ENST00000503215 ANAPC13Q9BS18 74 aa9.52□□□□□ -0.88
SCLT1-204ENST00000503215 MT-ATP8P03928 68 aa9.51□□□□□ -0.89
SCLT1-204ENST00000503215 A0A0U1RRA0 63 aa9.5□□□□□ -0.89
SCLT1-204ENST00000503215 M0R378 163 aa9.5□□□□□ -0.89
SCLT1-204ENST00000503215 COX17Q14061 63 aa9.5□□□□□ -0.89
SCLT1-204ENST00000503215 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
SCLT1-204ENST00000503215 TMEM223A0PJW6 202 aa9.5□□□□□ -0.89
SCLT1-204ENST00000503215 TCL1BO95988 128 aa9.5□□□□□ -0.89
SCLT1-204ENST00000503215 FAM19A1Q7Z5A9 133 aa9.5□□□□□ -0.89
SCLT1-204ENST00000503215 CFC1BP0CG36 223 aa9.49□□□□□ -0.89
SCLT1-204ENST00000503215 CFC1P0CG37 223 aa9.49□□□□□ -0.89
SCLT1-204ENST00000503215 SLC25A20O43772 301 aa9.48□□□□□ -0.89
SCLT1-204ENST00000503215 SNCGO76070 127 aa9.48□□□□□ -0.89
SCLT1-204ENST00000503215 LINC00158P58513 81 aa9.48□□□□□ -0.89
SCLT1-204ENST00000503215 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
SCLT1-204ENST00000503215 LEPROTO15243 131 aa9.47□□□□□ -0.89
SCLT1-204ENST00000503215 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
SCLT1-204ENST00000503215 ANKRD29Q8N6D5 301 aa9.47□□□□□ -0.89
SCLT1-204ENST00000503215 PLEKHB2Q96CS7 222 aa9.47□□□□□ -0.89
SCLT1-204ENST00000503215 J3QQQ9 107 aa9.45□□□□□ -0.9
SCLT1-204ENST00000503215 LGALS3P17931 250 aaKnown RBP9.45□□□□□ -0.9
SCLT1-204ENST00000503215 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
SCLT1-204ENST00000503215 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
SCLT1-204ENST00000503215 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
SCLT1-204ENST00000503215 H3BT86 120 aa9.44□□□□□ -0.9
SCLT1-204ENST00000503215 IFITM1P13164 125 aa9.44□□□□□ -0.9
SCLT1-204ENST00000503215 NDUFV3P56181 108 aaKnown RBP9.44□□□□□ -0.9
SCLT1-204ENST00000503215 SFTA2Q6UW10 78 aa9.44□□□□□ -0.9
SCLT1-204ENST00000503215 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
SCLT1-204ENST00000503215 C3orf22Q8N5N4 141 aa9.42□□□□□ -0.9
SCLT1-204ENST00000503215 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
SCLT1-204ENST00000503215 MUC2Q02817 5179 aa9.41□□□□□ -0.9
SCLT1-204ENST00000503215 HIGD2AQ9BW72 106 aa9.41□□□□□ -0.9
SCLT1-204ENST00000503215 IMUPQ9GZP8 106 aa9.41□□□□□ -0.9
SCLT1-204ENST00000503215 C9JAW5 83 aa9.4□□□□□ -0.9
SCLT1-204ENST00000503215 ACYP1P07311 99 aa9.4□□□□□ -0.9
SCLT1-204ENST00000503215 COX6CP09669 75 aa9.4□□□□□ -0.9
SCLT1-204ENST00000503215 MIR7-3HGQ8N6C7 128 aa9.4□□□□□ -0.9
SCLT1-204ENST00000503215 NCR3O14931 201 aa9.39□□□□□ -0.91
SCLT1-204ENST00000503215 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
SCLT1-204ENST00000503215 A4D1N5 150 aa9.38□□□□□ -0.91
SCLT1-204ENST00000503215 MEIG1Q5JSS6 88 aa9.38□□□□□ -0.91
SCLT1-204ENST00000503215 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
SCLT1-204ENST00000503215 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
SCLT1-204ENST00000503215 TIMM17BO60830 172 aa9.37□□□□□ -0.91
SCLT1-204ENST00000503215 SPRR4Q96PI1 79 aa9.37□□□□□ -0.91
SCLT1-204ENST00000503215 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms