RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
NEAT1-201ENST00000499732 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
NEAT1-201ENST00000499732 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
NEAT1-201ENST00000499732 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
NEAT1-201ENST00000499732 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
NEAT1-201ENST00000499732 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
NEAT1-201ENST00000499732 CASC10Q5T4H9 136 aa9.63□□□□□ -0.87
NEAT1-201ENST00000499732 M0R2N4 97 aa9.63□□□□□ -0.87
NEAT1-201ENST00000499732 ZNF73O43830 326 aaPredicted RBP9.63□□□□□ -0.87
NEAT1-201ENST00000499732 COX7BP24311 80 aa9.63□□□□□ -0.87
NEAT1-201ENST00000499732 ESRGQ1W209 222 aa9.62□□□□□ -0.87
NEAT1-201ENST00000499732 C5orf47Q569G3 176 aa9.62□□□□□ -0.87
NEAT1-201ENST00000499732 WFDC10BQ8IUB3 73 aa9.62□□□□□ -0.87
NEAT1-201ENST00000499732 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
NEAT1-201ENST00000499732 DNAH7Q8WXX0 4024 aa9.61□□□□□ -0.87
NEAT1-201ENST00000499732 HAMPP81172 84 aa9.61□□□□□ -0.87
NEAT1-201ENST00000499732 VPREB1P12018 145 aa9.59□□□□□ -0.87
NEAT1-201ENST00000499732 XAGE1AQ9HD64 81 aa9.59□□□□□ -0.87
NEAT1-201ENST00000499732 DYNC2H1Q8NCM8 4307 aaKnown RBP9.59□□□□□ -0.87
NEAT1-201ENST00000499732 OXTP01178 125 aa9.59□□□□□ -0.88
NEAT1-201ENST00000499732 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
NEAT1-201ENST00000499732 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
NEAT1-201ENST00000499732 KLKP1Q107X0 134 aa9.58□□□□□ -0.88
NEAT1-201ENST00000499732 M0R378 163 aa9.57□□□□□ -0.88
NEAT1-201ENST00000499732 CAMK2N2Q96S95 79 aa9.57□□□□□ -0.88
NEAT1-201ENST00000499732 H7BZZ5 65 aa9.55□□□□□ -0.88
NEAT1-201ENST00000499732 LCE6AA0A183 80 aa9.54□□□□□ -0.88
NEAT1-201ENST00000499732 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
NEAT1-201ENST00000499732 LINC01556Q5JQF7 62 aa9.54□□□□□ -0.88
NEAT1-201ENST00000499732 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
NEAT1-201ENST00000499732 SACSQ9NZJ4 4579 aa9.53□□□□□ -0.88
NEAT1-201ENST00000499732 F8WDY8 70 aa9.53□□□□□ -0.88
NEAT1-201ENST00000499732 HIGD2BQ4VC39 106 aa9.53□□□□□ -0.88
NEAT1-201ENST00000499732 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
NEAT1-201ENST00000499732 TENM2Q9NT68 2774 aa9.52□□□□□ -0.89
NEAT1-201ENST00000499732 NUPR2A6NF83 97 aa9.52□□□□□ -0.89
NEAT1-201ENST00000499732 Q6ZRU5 148 aa9.52□□□□□ -0.89
NEAT1-201ENST00000499732 SERP1Q9Y6X1 66 aa9.52□□□□□ -0.89
NEAT1-201ENST00000499732 RYR2Q92736 4967 aa9.51□□□□□ -0.89
NEAT1-201ENST00000499732 DNAH10OSP0CZ25 163 aa9.51□□□□□ -0.89
NEAT1-201ENST00000499732 Q5XG85 94 aa9.51□□□□□ -0.89
NEAT1-201ENST00000499732 C15orf56Q8N910 161 aa9.51□□□□□ -0.89
NEAT1-201ENST00000499732 LINC00588Q9Y4M8 146 aa9.51□□□□□ -0.89
NEAT1-201ENST00000499732 NDUFC1O43677 76 aa9.5□□□□□ -0.89
NEAT1-201ENST00000499732 APLNQ9ULZ1 77 aa9.49□□□□□ -0.89
NEAT1-201ENST00000499732 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
NEAT1-201ENST00000499732 ERC2-IT1O76042 136 aa9.47□□□□□ -0.89
NEAT1-201ENST00000499732 SCXQ7RTU7 201 aa9.47□□□□□ -0.89
NEAT1-201ENST00000499732 ATP5EP56381 51 aaPredicted RBP9.46□□□□□ -0.9
NEAT1-201ENST00000499732 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.9
NEAT1-201ENST00000499732 LYSTQ99698 3801 aa9.45□□□□□ -0.9
NEAT1-201ENST00000499732 RMI2Q96E14 147 aa9.45□□□□□ -0.9
NEAT1-201ENST00000499732 C1orf43Q9BWL3 253 aa9.45□□□□□ -0.9
NEAT1-201ENST00000499732 NREPQ16612 68 aa9.45□□□□□ -0.9
NEAT1-201ENST00000499732 Q6ZRP5 223 aa9.45□□□□□ -0.9
NEAT1-201ENST00000499732 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
NEAT1-201ENST00000499732 CSMD3Q7Z407 3707 aa9.44□□□□□ -0.9
NEAT1-201ENST00000499732 F8WEM9 126 aa9.44□□□□□ -0.9
NEAT1-201ENST00000499732 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
NEAT1-201ENST00000499732 KCNQ1DNQ9H478 68 aa9.44□□□□□ -0.9
NEAT1-201ENST00000499732 BPY2O14599 106 aa9.43□□□□□ -0.9
NEAT1-201ENST00000499732 A0A1B0GW54 56 aa9.42□□□□□ -0.9
NEAT1-201ENST00000499732 IGKV4-1P06312 121 aa9.42□□□□□ -0.9
NEAT1-201ENST00000499732 IGKV2D-24A0A075B6R9 120 aa9.42□□□□□ -0.9
NEAT1-201ENST00000499732 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
NEAT1-201ENST00000499732 NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
NEAT1-201ENST00000499732 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
NEAT1-201ENST00000499732 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
NEAT1-201ENST00000499732 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.91
NEAT1-201ENST00000499732 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.91
NEAT1-201ENST00000499732 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
NEAT1-201ENST00000499732 PLECQ15149 4684 aaKnown RBP9.39□□□□□ -0.91
NEAT1-201ENST00000499732 TMEM254Q8TBM7 123 aa9.39□□□□□ -0.91
NEAT1-201ENST00000499732 DHRS4-AS1Q9P1J3 65 aa9.38□□□□□ -0.91
NEAT1-201ENST00000499732 Q8N377 158 aa9.38□□□□□ -0.91
NEAT1-201ENST00000499732 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
NEAT1-201ENST00000499732 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
NEAT1-201ENST00000499732 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
NEAT1-201ENST00000499732 OCR1Q9BZK8 76 aa9.37□□□□□ -0.91
NEAT1-201ENST00000499732 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
NEAT1-201ENST00000499732 EPPK1P58107 5090 aaKnown RBP9.36□□□□□ -0.91
NEAT1-201ENST00000499732 PRYO14603 147 aa9.35□□□□□ -0.91
NEAT1-201ENST00000499732 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
NEAT1-201ENST00000499732 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.915e-18■■□□□ 12.1
NEAT1-201ENST00000499732 Q6ZRX8 168 aa9.35□□□□□ -0.91
NEAT1-201ENST00000499732 Q8N9L7 120 aa9.35□□□□□ -0.91
NEAT1-201ENST00000499732 ALMS1Q8TCU4 4167 aa9.34□□□□□ -0.91
NEAT1-201ENST00000499732 A0A0U1RQV1 116 aa9.33□□□□□ -0.92
NEAT1-201ENST00000499732 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
NEAT1-201ENST00000499732 SPRR1AP35321 89 aa9.33□□□□□ -0.92
NEAT1-201ENST00000499732 TNP2Q05952 138 aa9.33□□□□□ -0.92
NEAT1-201ENST00000499732 KRTAP1-5Q9BYS1 174 aa9.33□□□□□ -0.92
NEAT1-201ENST00000499732 DEFB105AQ8NG35 78 aa9.32□□□□□ -0.92
NEAT1-201ENST00000499732 LINC00476Q8WZB0 136 aa9.31□□□□□ -0.92
NEAT1-201ENST00000499732 IGLV1-50A0A075B6I6 118 aa9.31□□□□□ -0.92
NEAT1-201ENST00000499732 DNAH10Q8IVF4 4471 aa9.3□□□□□ -0.92
NEAT1-201ENST00000499732 Q9BRP9 147 aa9.3□□□□□ -0.92
NEAT1-201ENST00000499732 ETDCA0A1B0GVM5 59 aa9.29□□□□□ -0.92
NEAT1-201ENST00000499732 LY6G6CO95867 125 aa9.29□□□□□ -0.92
NEAT1-201ENST00000499732 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms