RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 HIGD2BQ4VC39 106 aa10.88□□□□□ -0.67
COL6A1-206ENST00000498614 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.87□□□□□ -0.67
COL6A1-206ENST00000498614 RMI2Q96E14 147 aa10.87□□□□□ -0.67
COL6A1-206ENST00000498614 KLKP1Q107X0 134 aa10.86□□□□□ -0.67
COL6A1-206ENST00000498614 ELOF1P60002 83 aaKnown RBP10.85□□□□□ -0.67
COL6A1-206ENST00000498614 EPM2AB3EWF7 344 aa10.83□□□□□ -0.68
COL6A1-206ENST00000498614 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
COL6A1-206ENST00000498614 SERP1Q9Y6X1 66 aa10.83□□□□□ -0.68
COL6A1-206ENST00000498614 H3BNG1 76 aa10.83□□□□□ -0.68
COL6A1-206ENST00000498614 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
COL6A1-206ENST00000498614 TENM3Q9P273 2699 aa10.82□□□□□ -0.68
COL6A1-206ENST00000498614 K7EIL1 84 aa10.82□□□□□ -0.68
COL6A1-206ENST00000498614 VPREB1P12018 145 aa10.82□□□□□ -0.68
COL6A1-206ENST00000498614 ESRGQ1W209 222 aa10.82□□□□□ -0.68
COL6A1-206ENST00000498614 CAMK2N2Q96S95 79 aa10.82□□□□□ -0.68
COL6A1-206ENST00000498614 KRTAP26-1Q6PEX3 210 aa10.82□□□□□ -0.68
COL6A1-206ENST00000498614 TRBV7-6A0A0J9YX20 115 aa10.81□□□□□ -0.68
COL6A1-206ENST00000498614 F8WEM9 126 aa10.81□□□□□ -0.68
COL6A1-206ENST00000498614 Q6ZRU5 148 aa10.79□□□□□ -0.68
COL6A1-206ENST00000498614 C15orf56Q8N910 161 aa10.79□□□□□ -0.68
COL6A1-206ENST00000498614 DEFB131BA0A096LNP1 70 aa10.77□□□□□ -0.69
COL6A1-206ENST00000498614 M0R378 163 aa10.77□□□□□ -0.69
COL6A1-206ENST00000498614 LINC00528Q8N1L1 170 aa10.77□□□□□ -0.69
COL6A1-206ENST00000498614 Q8N9L7 120 aa10.77□□□□□ -0.69
COL6A1-206ENST00000498614 NREPQ16612 68 aa10.76□□□□□ -0.69
COL6A1-206ENST00000498614 COL7A1Q02388 2944 aa10.76□□□□□ -0.69
COL6A1-206ENST00000498614 HUWE1Q7Z6Z7 4374 aaKnown RBP10.76□□□□□ -0.69
COL6A1-206ENST00000498614 KRTAP21-3Q3LHN1 58 aa10.75□□□□□ -0.69
COL6A1-206ENST00000498614 C1orf43Q9BWL3 253 aa10.75□□□□□ -0.69
COL6A1-206ENST00000498614 IGKV2D-24A0A075B6R9 120 aa10.75□□□□□ -0.69
COL6A1-206ENST00000498614 C11orf45Q8TAV5 145 aa10.75□□□□□ -0.69
COL6A1-206ENST00000498614 BPY2O14599 106 aa10.74□□□□□ -0.69
COL6A1-206ENST00000498614 PRKDCP78527 4128 aaKnown RBP10.73□□□□□ -0.69
COL6A1-206ENST00000498614 MEGF8Q7Z7M0 2845 aa10.73□□□□□ -0.69
COL6A1-206ENST00000498614 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
COL6A1-206ENST00000498614 IGKV4-1P06312 121 aa10.72□□□□□ -0.69
COL6A1-206ENST00000498614 NDUFC1O43677 76 aa10.71□□□□□ -0.69
COL6A1-206ENST00000498614 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.7
COL6A1-206ENST00000498614 Q6ZRP5 223 aa10.7□□□□□ -0.7
COL6A1-206ENST00000498614 FP248Q71RG6 208 aaPredicted RBP10.7□□□□□ -0.7
COL6A1-206ENST00000498614 TMEM254Q8TBM7 123 aa10.7□□□□□ -0.7
COL6A1-206ENST00000498614 SMIM26A0A096LP01 95 aa10.68□□□□□ -0.7
COL6A1-206ENST00000498614 C3orf84H3BNL1 204 aa10.68□□□□□ -0.7
COL6A1-206ENST00000498614 DEFB105AQ8NG35 78 aa10.67□□□□□ -0.7
COL6A1-206ENST00000498614 SYCNQ0VAF6 134 aa10.66□□□□□ -0.7
COL6A1-206ENST00000498614 LINC00474Q9P2X8 69 aa10.66□□□□□ -0.7
COL6A1-206ENST00000498614 ERC2-IT1O76042 136 aa10.65□□□□□ -0.7
COL6A1-206ENST00000498614 LINC00336Q6ZUF6 198 aa10.65□□□□□ -0.7
COL6A1-206ENST00000498614 OCR1Q9BZK8 76 aa10.65□□□□□ -0.7
COL6A1-206ENST00000498614 Q8N377 158 aa10.64□□□□□ -0.71
COL6A1-206ENST00000498614 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
COL6A1-206ENST00000498614 ATP5EP56381 51 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-206ENST00000498614 SERTAD4-AS1Q5TG53 156 aa10.62□□□□□ -0.71
COL6A1-206ENST00000498614 KCNQ1DNQ9H478 68 aa10.62□□□□□ -0.71
COL6A1-206ENST00000498614 A0A0U1RQV1 116 aa10.61□□□□□ -0.71
COL6A1-206ENST00000498614 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
COL6A1-206ENST00000498614 C7orf33Q8WU49 177 aa10.61□□□□□ -0.71
COL6A1-206ENST00000498614 LINC00588Q9Y4M8 146 aa10.61□□□□□ -0.71
COL6A1-206ENST00000498614 PRYO14603 147 aa10.6□□□□□ -0.71
COL6A1-206ENST00000498614 NKAPP1Q8N9T2 125 aa10.6□□□□□ -0.71
COL6A1-206ENST00000498614 CASC10Q5T4H9 136 aa10.6□□□□□ -0.71
COL6A1-206ENST00000498614 F8WDY8 70 aa10.59□□□□□ -0.71
COL6A1-206ENST00000498614 IGLV5-48A0A075B6I7 105 aa10.59□□□□□ -0.71
COL6A1-206ENST00000498614 FAM229BQ4G0N7 80 aa10.58□□□□□ -0.72
COL6A1-206ENST00000498614 HIGD2AQ9BW72 106 aa10.58□□□□□ -0.72
COL6A1-206ENST00000498614 B9D2Q9BPU9 175 aa10.57□□□□□ -0.72
COL6A1-206ENST00000498614 PRO0628Q9UI54 55 aa10.57□□□□□ -0.72
COL6A1-206ENST00000498614 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
COL6A1-206ENST00000498614 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
COL6A1-206ENST00000498614 SMIM29Q86T20 159 aa10.54□□□□□ -0.72
COL6A1-206ENST00000498614 Q9BRP9 147 aa10.54□□□□□ -0.72
COL6A1-206ENST00000498614 FAM30AQ9NZY2 134 aa10.54□□□□□ -0.72
COL6A1-206ENST00000498614 FBN3Q75N90 2809 aa10.54□□□□□ -0.72
COL6A1-206ENST00000498614 DNAH1Q9P2D7 4330 aa10.54□□□□□ -0.72
COL6A1-206ENST00000498614 FAM168BA1KXE4 195 aa10.54□□□□□ -0.72
COL6A1-206ENST00000498614 FUSP35637 526 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL6A1-206ENST00000498614 TGP01266 2768 aa10.53□□□□□ -0.72
COL6A1-206ENST00000498614 Q6ZRX8 168 aa10.53□□□□□ -0.72
COL6A1-206ENST00000498614 ST20-AS1Q8NBB2 130 aa10.53□□□□□ -0.72
COL6A1-206ENST00000498614 TLX1NBP0CAT3 122 aa10.52□□□□□ -0.73
COL6A1-206ENST00000498614 DHRS4-AS1Q9P1J3 65 aa10.52□□□□□ -0.73
COL6A1-206ENST00000498614 KRTAP4-16G5E9R7 235 aaPredicted RBP10.51□□□□□ -0.73
COL6A1-206ENST00000498614 TNP2Q05952 138 aa10.51□□□□□ -0.73
COL6A1-206ENST00000498614 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
COL6A1-206ENST00000498614 LYSTQ99698 3801 aa10.5□□□□□ -0.73
COL6A1-206ENST00000498614 CSMD3Q7Z407 3707 aa10.5□□□□□ -0.73
COL6A1-206ENST00000498614 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
COL6A1-206ENST00000498614 IGLV1-50A0A075B6I6 118 aa10.48□□□□□ -0.73
COL6A1-206ENST00000498614 ETDCA0A1B0GVM5 59 aa10.48□□□□□ -0.73
COL6A1-206ENST00000498614 Q8NBF4 154 aa10.48□□□□□ -0.73
COL6A1-206ENST00000498614 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
COL6A1-206ENST00000498614 KRTAP7-1Q8IUC3 87 aa10.47□□□□□ -0.73
COL6A1-206ENST00000498614 A0A1B0GW54 56 aa10.46□□□□□ -0.73
COL6A1-206ENST00000498614 SPRR1AP35321 89 aa10.46□□□□□ -0.73
COL6A1-206ENST00000498614 DSCR10P59022 87 aa10.46□□□□□ -0.74
COL6A1-206ENST00000498614 LCE6AA0A183 80 aa10.45□□□□□ -0.74
COL6A1-206ENST00000498614 SPRR4Q96PI1 79 aa10.44□□□□□ -0.74
COL6A1-206ENST00000498614 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
COL6A1-206ENST00000498614 BRK1Q8WUW1 75 aa10.43□□□□□ -0.74
COL6A1-206ENST00000498614 TENM2Q9NT68 2774 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms