RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ANKRD26Q9UPS8 1709 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 TRAV30A0A087WSZ9 112 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 TMEM218A2RU14 115 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 GNGT2O14610 69 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 MT-ATP8P03928 68 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 MT1HP80294 61 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 PMCHL1Q16048 86 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 C9orf62Q8N4C0 152 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 TCEAL7Q9BRU2 100 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 VAMP8Q9BV40 100 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 APLNQ9ULZ1 77 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 SAMD9Q5K651 1589 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 COL14A1Q05707 1796 aaKnown RBP-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 CEP290O15078 2479 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 APOBP04114 4563 aaKnown RBP-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 CRYBG1Q9Y4K1 1723 aa-0.38□□□□□ -2.47
PSPC1-205ENST00000497722 PKD1L2Q7Z442 2459 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 CCL22O00626 93 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 MT1AP04731 61 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 MT1GP13640 62 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 ASIPP42127 132 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 MT1XP80297 61 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 WFDC9Q8NEX5 89 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 TRGV9Q99603 122 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 S4R3F8 94 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 EPRSP07814 1512 aaKnown RBP-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 TROQ12816 1431 aaPredicted RBP-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 CNTLNQ9NXG0 1405 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 TRIOO75962 3097 aa-0.39□□□□□ -2.47
PSPC1-205ENST00000497722 DNAH1Q9P2D7 4330 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 MGAM2Q2M2H8 2515 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 QSER1Q2KHR3 1735 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 ITPR1Q14643 2758 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 CPSF4LA6NMK7 179 aaKnown RBP-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 ATOX1O00244 68 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 MT1BP07438 61 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 UQCRHP07919 91 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 DEFB107AQ8IZN7 70 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 SERP2Q8N6R1 65 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 PMCHL2Q9BQD1 86 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 ALKQ9UM73 1620 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 ACACAQ13085 2346 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 RGPD2P0DJD1 1756 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 BCORQ6W2J9 1755 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 FAM186AA6NE01 2351 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 KALRNO60229 2985 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 MTORP42345 2549 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 LRRK2Q5S007 2527 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 FRYQ5TBA9 3013 aa-0.4□□□□□ -2.47
PSPC1-205ENST00000497722 KIF20BQ96Q89 1820 aa-0.41□□□□□ -2.47
PSPC1-205ENST00000497722 FANCAO15360 1455 aa-0.41□□□□□ -2.47
PSPC1-205ENST00000497722 CICQ96RK0 1608 aaPredicted RBP-0.41□□□□□ -2.47
PSPC1-205ENST00000497722 C9orf92A6NGG3 77 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 I3L3M4 83 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 ARMS2P0C7Q2 107 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 HEPN1Q6WQI6 88 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 CRIPTQ9P021 101 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 PREX1Q8TCU6 1659 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 CCDC168Q8NDH2 2452 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 SACSQ9NZJ4 4579 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 UTP20O75691 2785 aaKnown RBP-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 PKD1L3Q7Z443 1732 aa-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 GCN1Q92616 2671 aaKnown RBP-0.41□□□□□ -2.48
PSPC1-205ENST00000497722 PDE4DIPQ5VU43 2346 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 DMXL1Q9Y485 3027 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 A0A0C4DFX4 3053 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 MT2AP02795 61 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 SMR3BP02814 79 aaPredicted RBP-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 RBP2P50120 134 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 S100A10P60903 97 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 CLPSL2Q6UWE3 100 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 KRTAP8-1Q8IUC2 63 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 MT1MQ8N339 61 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 ACBD7Q8N6N7 88 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 AP4S1Q9Y587 144 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 CLIP1P30622 1438 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 VPS8Q8N3P4 1428 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 CDC42BPGQ6DT37 1551 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 RIF1Q5UIP0 2472 aaKnown RBP-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 NBEAQ8NFP9 2946 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 SRCAPQ6ZRS2 3230 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 AKAP12Q02952 1782 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 DNAH5Q8TE73 4624 aa-0.42□□□□□ -2.48
PSPC1-205ENST00000497722 TIAM2Q8IVF5 1701 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 TRBV7-7A0A0K0K1E9 115 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 ATP6V1G2-DDX39BF2Z307 99 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 DEFB4AO15263 64 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 GNGT1P63211 74 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 HMGN3Q15651 99 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 MYH4Q9Y623 1939 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 RANBP2P49792 3224 aaKnown RBP-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 RGPD8O14715 1765 aaPredicted RBP-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 RGPD5Q99666 1765 aa-0.43□□□□□ -2.48
PSPC1-205ENST00000497722 UBR1Q8IWV7 1749 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 MYO3AQ8NEV4 1616 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 LINC00032P0C843 101 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 MT1LQ93083 61 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 MRPL34Q9BQ48 92 aaKnown RBP-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 DPY30Q9C005 99 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 CDKN2A-AS1Q9UH64 79 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms