RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 SPANXCQ9NY87 97 aa12.07□□□□□ -0.48
COL9A2-211ENST00000496215 PRR4Q16378 134 aa12.06□□□□□ -0.48
COL9A2-211ENST00000496215 ATOH7Q8N100 152 aa12.06□□□□□ -0.48
COL9A2-211ENST00000496215 ANKRD39Q53RE8 183 aa12.04□□□□□ -0.48
COL9A2-211ENST00000496215 SCGB1D4Q6XE38 83 aa12.04□□□□□ -0.48
COL9A2-211ENST00000496215 Q6ZRX8 168 aa12.04□□□□□ -0.48
COL9A2-211ENST00000496215 C3orf22Q8N5N4 141 aa12.04□□□□□ -0.48
COL9A2-211ENST00000496215 S100A2P29034 98 aa12.03□□□□□ -0.48
COL9A2-211ENST00000496215 HIST3H2BBQ8N257 126 aa12.03□□□□□ -0.48
COL9A2-211ENST00000496215 CBY1Q9Y3M2 126 aa12.03□□□□□ -0.48
COL9A2-211ENST00000496215 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
COL9A2-211ENST00000496215 JOSD1Q15040 202 aaPredicted RBP12□□□□□ -0.49
COL9A2-211ENST00000496215 HIST1H2BLQ99880 126 aa12□□□□□ -0.49
COL9A2-211ENST00000496215 Q9BRP9 147 aa12□□□□□ -0.49
COL9A2-211ENST00000496215 PPDPFQ9H3Y8 114 aa12□□□□□ -0.49
COL9A2-211ENST00000496215 S100A6P06703 90 aa11.99□□□□□ -0.49
COL9A2-211ENST00000496215 OR13C6PQ8NH95 151 aa11.99□□□□□ -0.49
COL9A2-211ENST00000496215 SPANXDQ9BXN6 97 aa11.99□□□□□ -0.49
COL9A2-211ENST00000496215 LINC00483Q53H64 154 aa11.98□□□□□ -0.49
COL9A2-211ENST00000496215 ERC2-IT1O76042 136 aa11.97□□□□□ -0.49
COL9A2-211ENST00000496215 COPS9Q8WXC6 57 aa11.97□□□□□ -0.49
COL9A2-211ENST00000496215 SNRPEP62304 92 aaKnown RBP11.96□□□□□ -0.49
COL9A2-211ENST00000496215 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
COL9A2-211ENST00000496215 HINT1P49773 126 aaPredicted RBP11.95□□□□□ -0.5
COL9A2-211ENST00000496215 PCP2Q8IVA1 136 aa11.95□□□□□ -0.5
COL9A2-211ENST00000496215 CTAG1AP78358 180 aa11.94□□□□□ -0.5
COL9A2-211ENST00000496215 LINC00518Q8N0U6 118 aa11.94□□□□□ -0.5
COL9A2-211ENST00000496215 IFITM1P13164 125 aa11.92□□□□□ -0.5
COL9A2-211ENST00000496215 SPAG11AQ6PDA7 123 aa11.92□□□□□ -0.5
COL9A2-211ENST00000496215 Q6ZVH6 145 aa11.92□□□□□ -0.5
COL9A2-211ENST00000496215 RETNLBQ9BQ08 111 aa11.92□□□□□ -0.5
COL9A2-211ENST00000496215 HSBP1L1C9JCN9 74 aa11.91□□□□□ -0.5
COL9A2-211ENST00000496215 Q8NBF4 154 aa11.91□□□□□ -0.5
COL9A2-211ENST00000496215 IGLV9-49A0A0B4J1Y8 123 aa11.89□□□□□ -0.51
COL9A2-211ENST00000496215 C4orf48Q5BLP8 95 aa11.89□□□□□ -0.51
COL9A2-211ENST00000496215 MOBPQ13875 183 aa11.88□□□□□ -0.51
COL9A2-211ENST00000496215 C6orf99Q4VX62 202 aa11.86□□□□□ -0.51
COL9A2-211ENST00000496215 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
COL9A2-211ENST00000496215 DHRS4-AS1Q9P1J3 65 aa11.86□□□□□ -0.51
COL9A2-211ENST00000496215 C5orf52A6NGY3 159 aa11.85□□□□□ -0.51
COL9A2-211ENST00000496215 COX7BP24311 80 aa11.85□□□□□ -0.51
COL9A2-211ENST00000496215 ELOF1P60002 83 aaKnown RBP11.85□□□□□ -0.51
COL9A2-211ENST00000496215 ST20-AS1Q8NBB2 130 aa11.85□□□□□ -0.51
COL9A2-211ENST00000496215 A6NDN8 102 aa11.83□□□□□ -0.52
COL9A2-211ENST00000496215 SCGB1D1O95968 90 aa11.82□□□□□ -0.52
COL9A2-211ENST00000496215 C9orf153Q5TBE3 101 aa11.82□□□□□ -0.52
COL9A2-211ENST00000496215 SPINK1P00995 79 aa11.81□□□□□ -0.52
COL9A2-211ENST00000496215 SSBP3-AS1Q7Z2R9 100 aa11.81□□□□□ -0.52
COL9A2-211ENST00000496215 MUC2Q02817 5179 aa11.81□□□□□ -0.52
COL9A2-211ENST00000496215 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
COL9A2-211ENST00000496215 IGLV7-46A0A075B6I9 117 aa11.78□□□□□ -0.52
COL9A2-211ENST00000496215 TRAV13-2A0A0B4J235 113 aa11.78□□□□□ -0.52
COL9A2-211ENST00000496215 A0A1B0GWB2 263 aa11.77□□□□□ -0.53
COL9A2-211ENST00000496215 TPRXLQ17RH7 258 aa11.77□□□□□ -0.53
COL9A2-211ENST00000496215 SLC25A34Q6PIV7 304 aa11.77□□□□□ -0.53
COL9A2-211ENST00000496215 SPRR1BP22528 89 aa11.76□□□□□ -0.53
COL9A2-211ENST00000496215 RPS29P62273 56 aaKnown RBP11.75□□□□□ -0.53
COL9A2-211ENST00000496215 FP248Q71RG6 208 aaPredicted RBP11.74□□□□□ -0.53
COL9A2-211ENST00000496215 CDIP1Q9H305 208 aa11.72□□□□□ -0.53
COL9A2-211ENST00000496215 SMIM11BQ8TCY0 68 aa11.71□□□□□ -0.53
COL9A2-211ENST00000496215 LAMTOR3Q9UHA4 124 aa11.71□□□□□ -0.53
COL9A2-211ENST00000496215 A4D1N5 150 aa11.7□□□□□ -0.54
COL9A2-211ENST00000496215 COX8AP10176 69 aa11.7□□□□□ -0.54
COL9A2-211ENST00000496215 TAL2Q16559 108 aa11.7□□□□□ -0.54
COL9A2-211ENST00000496215 DEFB105AQ8NG35 78 aa11.69□□□□□ -0.54
COL9A2-211ENST00000496215 Q8N377 158 aa11.68□□□□□ -0.54
COL9A2-211ENST00000496215 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
COL9A2-211ENST00000496215 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
COL9A2-211ENST00000496215 TEX49A0A1B0GTD5 131 aa11.67□□□□□ -0.54
COL9A2-211ENST00000496215 SLC25A20O43772 301 aa11.66□□□□□ -0.54
COL9A2-211ENST00000496215 Q1RN00 199 aa11.66□□□□□ -0.54
COL9A2-211ENST00000496215 MUC17Q685J3 4493 aa11.65□□□□□ -0.54
COL9A2-211ENST00000496215 DLEU1O43261 78 aa11.65□□□□□ -0.54
COL9A2-211ENST00000496215 IGLV5-48A0A075B6I7 105 aa11.64□□□□□ -0.55
COL9A2-211ENST00000496215 VAMP3Q15836 100 aa11.64□□□□□ -0.55
COL9A2-211ENST00000496215 PAM16Q9Y3D7 125 aa11.64□□□□□ -0.55
COL9A2-211ENST00000496215 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
COL9A2-211ENST00000496215 C12orf57Q99622 126 aa11.63□□□□□ -0.55
COL9A2-211ENST00000496215 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
COL9A2-211ENST00000496215 LINC01547P58512 204 aaPredicted RBP11.61□□□□□ -0.55
COL9A2-211ENST00000496215 C14orf144Q96I85 54 aa11.61□□□□□ -0.55
COL9A2-211ENST00000496215 LIMD2Q9BT23 127 aa11.61□□□□□ -0.55
COL9A2-211ENST00000496215 KRTAP13-3Q3SY46 172 aa11.6□□□□□ -0.55
COL9A2-211ENST00000496215 HRCT1Q6UXD1 115 aa11.59□□□□□ -0.55
COL9A2-211ENST00000496215 SMIM29Q86T20 159 aa11.59□□□□□ -0.55
COL9A2-211ENST00000496215 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
COL9A2-211ENST00000496215 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
COL9A2-211ENST00000496215 LINC00575Q6W349 94 aa11.56□□□□□ -0.56
COL9A2-211ENST00000496215 CD164Q04900 197 aa11.54□□□□□ -0.56
COL9A2-211ENST00000496215 BVES-AS1Q5T3Y7 98 aa11.54□□□□□ -0.56
COL9A2-211ENST00000496215 FAT4Q6V0I7 4981 aa11.53□□□□□ -0.56
COL9A2-211ENST00000496215 hADV29S1A0JD25 119 aa11.53□□□□□ -0.56
COL9A2-211ENST00000496215 Q6ZQY7 126 aa11.53□□□□□ -0.56
COL9A2-211ENST00000496215 C2orf91Q6ZV80 131 aa11.53□□□□□ -0.56
COL9A2-211ENST00000496215 F8WEM9 126 aa11.52□□□□□ -0.57
COL9A2-211ENST00000496215 H7C2G1 150 aa11.52□□□□□ -0.57
COL9A2-211ENST00000496215 RAB37Q96AX2 223 aa11.52□□□□□ -0.57
COL9A2-211ENST00000496215 A0A0U1RQV1 116 aa11.51□□□□□ -0.57
COL9A2-211ENST00000496215 CFC1BP0CG36 223 aa11.49□□□□□ -0.57
COL9A2-211ENST00000496215 CFC1P0CG37 223 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms